Rros004790.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- ct
- Assembly
- GCA_949824845.1
- Location
- OX463755.1:106139063-106197671[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1e-25 2e-22 79.7 0.0 3 71 788 857 786 863 0.94 2 3 4.1e-31 7.8e-28 97.0 0.0 3 77 1214 1289 1212 1291 0.96 3 3 5.5e-30 1e-26 93.4 0.0 3 77 1431 1506 1429 1508 0.96
Sequence Information
- Coding Sequence
- ATGCAGCCAACATTGCCACAAACAGCCGGGACAGCCGATATGGATTTGACGGCTGTTCAATCAATGGATTGGTTATTTAAGAAGGAGCGAATCTATCTATTGGCACAATTCTGGCAACAGAGGGCTACTTTGGCTGAAAAGGAAGTCAACACTTTGAAGGAACAATTGTCAACAAATTCAACAGCAACAACGACATCCACAACTTCGACAACAACCACCACAGCGTCTTCGATACATTCGTCGCCACCATCTCCGTCGTCGGTGAGCACAACACCCATACCAAATATCAAGTTATCACCAACGATAAACAACAACAGTTcgttcaacaacaacaacaacaacaatagtaataacaataacaaactAAACAGTGTTGCCATATCACAGCATTTACACCAGAACGGAAATTTGCTAGCGGCAACACCGTCGCCGTCTCCACCATTATCCGAGAACGGTAGCTCACTGAACGGCTGCCTTAACTCGGCGGCGGCAAAATTACTCTTCAATCATAATCAAATAATGGAATCAACCGGATCATCTGATCTATCATCGGTGGTGAATACAACGACGACAGCGACCACAACCACTAGCAGCACTGGCAATCCAATAGACGCTAGTAAACTTATAACGGCAATGACCGCCGAAATGAATCTCCACCATCAAGACTCCAGCGAATCGGCAACGCTGGCGAGCAATCAAATATCAAATCGGTCGCATAGCCCACTCCTGCTCAAAATGGATGGCAGCACTGGACATGAGGCAACAcgaaacaataataacaataatagtACTAGTAACAATAATAAGAATACAAATAGTAATAGCAGTAGTAGTTGTAATAATAATTTAGCTGATGAATTGGCTGCCAAAGAGAAAGAGATTAAAGCACTTATCGACGAGGTAAACCGACTGCAAGCCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTAGAAGCGAAACGTCAACACATTCTGCGGCTGGAGGACCGTCTGGAGGTGCCACAGTTCGCCGAAGATTGCTCTGCAGTGACCAAGTCCAGCACGGATGAGTACCACGAGGATCAGTCAGAAACAGCATTATCTGCAGTAGTTTCTGAGCCACCAGCGGTAGTGCCAGAAGAGATCCACATCAAAAAGGAAACTCAGACACCAACCGCACTCGACATCACCACcgccgctgctgctgctgctgcagctgTTGCAAATGACCCCAAGCAGTTCCAAGAACTTTTACTCGAACGAACCAAGGCACTGGCGGCTGCTGCACACGCATCCAGCGAAGCACTGAAATCTGAAGGAATTTCCAGTGACTCGACCGTAGCAGATACCACGTCGTGTACCAAGGCTGCTGACAATGAACCCGCAGACCTTAGCAGCGACCCGAACGATTCGAGTCAGCAGCAAGAAGTGCGACCGCCATCGGAATCGGCGGCCGATGCAATTCCATCGTCGAATTTCGCGAGTGTTGATCAGTTTGGTTCGCTGCTGGGCGGTGAGTTGGTGAACTCGTATTGGCGTCGTGGCTTTGATTTGTCGGCAGAATTGAAATTGCCACCGCCACAACATCATATGCCATTGGCGCCACCACctccgcaacaacagcagcagccatcACAATCAACGGCGGCCGTGTCAATAGCACatccaccaccaccgccaccaccaTCAATAGCGACATCAAATCCAACCTCTAAAACGCCAACAtcgattttccaaaatttcccATCAATTCTTTCGTGTCGATCGCCACCACCACTTCCGATGGCGGCCACCGGACCATCAACCACCACTCTCTTGAGTCAGCTAGTCAATTCAACCTTCTCATCCAATTCAACCCCTTCTCTTCGAACAGATACCCATCCTTCGttatcgttgtcgtcgtcgtcgtcctcgTCGACCACAACCACTGGCGCACACCTGCAACAGTCCGCGCATCATCACCTacaccatcatcatcagcagctTCCGCACCAGCATCCTGCCCTACAACACCATCACCAGGACTACGAGAAGGCCAACAGTCATCACGACTCGTCGTCGACGGCCAGTACGCCCAATCTCCAGGACCAGCGTTCCAATGACGAGCATATGAACGGCAAATCGGCCAAGTCCCTGGAGGACAACAACAACTCGCTGGGCTCGTTGGCCCACCTACCACCAGCATTCCTTCCAGGCCTGCCATTCCAATTCCAAGATCGCGGTCACTTCCGTTTCGCCGAGGATATACAGCTACCACCCGGTGCATCAATGGCTGGTCGTCTCGGCGAATCGCTCATACCCAAGGGCGATCCCATGGAGGCTAAGCTCCAAGAAATGCTTCGCTATAACATGGACAAGTACGCCAATCAAAGTTTGGATACCCTACACATATCACGACGAGTACGCGAACTCCTCTCCGTGCACAACATCGGACAAAGACTCTTCGCCAAGTACATTCTCGGCCTGTCACAAGGCACCGTGTCCGAGCTGCTGTCCAAGCCAAAGCCCTGGGATAAATTGACTGAGAAAGGCCGTGACAGTTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGCTGCTCAAGTCgctgataccaaaaaaagACTCGGGCATGCCGCAATATGGTCGCAATGAGGACTCCATGTCGGATGATCGCATTGCGCACATTTTGAATGAGGCTTCCAGCCTAATGAAGACACCTCAGGGACCTGTTGGGCCGTTGCAACACCAATTGCAGCACGAAGCCCAGCGCCAGCAACAGCATCAACAGCTGTCTTCGCTTGAGGATTCACATAGCAATGATGATTCAAAGTCTCCGCATCCCTCGTGCACTTCGCCGTTCTATAAAGACTCACCGgtgcaacaacagcagcagcagcagcagcagcaacagcaacgaCGTGACGACTCTCAGCGTCGCAGTGTAAAACCCGATGAAATGTCCCAGGACAAGATGGCGAGAATTTACCAAGAGGAGTTGGCAAAGCTGATGACGCGCACACCACGCGACACCTTCCCAAGTTTTCTGTTTCCACACTTTTTCAGTGCGGCTGGTGGCCTACCGCCCACCAACAGTGCGATGCCACCAGATGACAACATTCGCATGGCCTTTGAGGCTTACCACCGCGAGATGGCCAAGTTGCAGCAAAACAGTAGCGGCAACATTCCCAACTTCCCGAACTTCTCCAGCTTGATGGCTCTGCAGCAGCAAGTGTTGAACGGCGCTCAGGACCTGTCCGTGCCGAAGGAGAACGAAATTAAGGTGAACGGTCAACGCAATTCCATGGAGAGCTGCGACTCAAATCAAACCAAAGAAGCTAACGACGAGGCGGGTCTGCGTCACTCAAGTGCATTTAGCTTAGTTCGTAATAAACCAGAATCCACGCCAATATTGTGCTCCAACTCAAATCCCAACACGAATTCGGCTGCTCCCAGTCCACTCAGCAACTCAATTCTTCAGCCGGCAATGACGCCCACCGAGGACTTCTCGACTGCTGCCAGCCCCCTGCAGCGAATGGCATCAATCACCAACTCACTGATAACACAGCCCCCAGTGACGCCACACCACTCGCAACCGCAGAGACCGACAAAGGCCGTACTGCCACCCATCACTCAGCAACAGTTCGACATGTTTAACAATCTAAACACTGAAGACATTGTCCGCCGCGTAAAAGAAGCCCTCTCGCAGTACTCCATCAGCCAAAGGCTGTTCGGAGAGTCAGTTCTGGGTTTGTCGCAGGGATCTGTGTCAGATCTTCTTGCGAGACCCAAACCCTGGCATATGTTGACTCAAAAGGGCCGGGAACCCTTCATtcgaatgaaaatgtttttggaaGACGAAAACGCTGTGCATAAGCTGGTGGCCAGTCAATACAAAATTGCTCCGGAGAAACTGATGCGCACTGGCAGTTACAGTGGCAGTCCGCAAATACCACAAGGCCTTGCTAACAAGATGAACAGCATTCCAATGCAGAAGATGATGAACGAGCTAAAAATGCAGGAACCCCAAGCCCAGCATATTATGCAGCAAATGCAGGCCGCATCTGCAATGGCAgcagctgctgctgctggtCACATGCAAAATGCCCAGCATCAGGGTATGTTACTTACAACACCCGGTCTTCCACCGCAGCACGCTATAAGCCTGCAGCAAGCACAAGCGCAAGCCGCTAGCGAAAAAAAACCAATGATGATGCCAATCCACTCACCACATCAAGCTAATGCCATGCGAAGCAGCATGCACCAGCACATGTCCCCAACTGTGTATGAGATGGCTGCCCTCACACAAGACCTCGACACACAAGTCATTACCACAAAGATCAAGGAAGCTCTTCTAGCTAACAACATCGGCCAGAAGATTTTCGGGGAAGCAGTGCTGGGTTTGTCACAAGGTTCCGTGTCCGAGTTGCTGTCAAAACCAAAGCCATGGCACATGCTAAGCATTAAGGGGCGAGAACCCTTCATCCGAATGCAGTTGTGGCTATCCGATGCCAACAACGTCGAGCGGTTGCAGGTACTTAAGAACGAACGACGTGAAGCTAGCAAACGCCGTCGGTCTACAGGGCCCAACCAACAGGACAACAGCTCAGACACCAGTAGCAATGATACCGCCGACTTTTACACCAGCAGTCCAGGGCCAGGTTCCGTGGGATCAGTAGGAGCACCACCTAACAAGAAGCAACGCGTCCTCTTCTCCGAAGAACAAAAGGAAGCCCTCCGCCTGGCTTTCGCTCTCGATCCCTACCCAAATGTGGGAACAATTGAGTTCCTTGCCAACGAGCTGGGTCTAGCAACACGCACTATCACCAATTGGTTCCACAACCACCGAATGCGCCTCAAGCAGCAAGTGCCGCATGGTCAGCCCACGGAACCGGTTCCCAGCCGAGAGAACACCAACGCGACACCCTTCGACCCCGTGCAATTCCGCATACTCCTTAATCAAAGACTGATGGAATTGCAGAAAGAGCGCATGGGACTGAGTGGTGCACCGATCCCTTACCCACCGTACTTTGCCGCCAACCCCAATCTTGCAGCGCTCATCGGACGTGGTCTCCTGCCCGGAGGTGGTGAACCTGATCTTCAAGCCCTCAACAATGCTTTCAAGGAGCAAATGAGTGGTCTCGATCTGTCTCTAAAGCGGGAACGCGATGACGACTTCGAGGACGATGGCGAGGGTGACAGCCACCTCTCCGACAACGAGTCTATCAACGGAAGCGACGAAAAATCTGAGATGAGTGAAACACCGCGCTCGTCCCTATCCGGAGCGGGCATGCAATCGCGAACTTCCCGACGCAAGCCCGCTGCTCCCCAATGGGTCAACCCCGATTGGCAGGGAGACGGCAAATCCGGACTCATCCCTCCAATGCCCACCGGTGGTGCCTCCGACAAGGAAGTCATTATCAATGGCGTCTGCGTGATGCAGCAACAAGCTGCCGACTACAGTCGAAAATCAGCAAACGccgatgacgacgatgatggtGCATCCGATGCCAATGACGATGAACCATCAGTCCATCATCGCATGCAGTCGTCCGACTGTGAAGACCCACCCGCGGACATTGACCAGCGTTACATGGAGCCTGAGGTTCGAATCAAACAAGAAGAAGACTGTGACAGCAACGATAGCCATCAAGACGATCATGATTCCGACCTAAGGAAACTGACACACAACCgggatgacgatgacgacacACCCGGTGCATGGAACTACTAA
- Protein Sequence
- MQPTLPQTAGTADMDLTAVQSMDWLFKKERIYLLAQFWQQRATLAEKEVNTLKEQLSTNSTATTTSTTSTTTTTASSIHSSPPSPSSVSTTPIPNIKLSPTINNNSSFNNNNNNNSNNNNKLNSVAISQHLHQNGNLLAATPSPSPPLSENGSSLNGCLNSAAAKLLFNHNQIMESTGSSDLSSVVNTTTTATTTTSSTGNPIDASKLITAMTAEMNLHHQDSSESATLASNQISNRSHSPLLLKMDGSTGHEATRNNNNNNSTSNNNKNTNSNSSSSCNNNLADELAAKEKEIKALIDEVNRLQALQETHIVQIQRLEDNLEAKRQHILRLEDRLEVPQFAEDCSAVTKSSTDEYHEDQSETALSAVVSEPPAVVPEEIHIKKETQTPTALDITTAAAAAAAAVANDPKQFQELLLERTKALAAAAHASSEALKSEGISSDSTVADTTSCTKAADNEPADLSSDPNDSSQQQEVRPPSESAADAIPSSNFASVDQFGSLLGGELVNSYWRRGFDLSAELKLPPPQHHMPLAPPPPQQQQQPSQSTAAVSIAHPPPPPPPSIATSNPTSKTPTSIFQNFPSILSCRSPPPLPMAATGPSTTTLLSQLVNSTFSSNSTPSLRTDTHPSLSLSSSSSSSTTTTGAHLQQSAHHHLHHHHQQLPHQHPALQHHHQDYEKANSHHDSSSTASTPNLQDQRSNDEHMNGKSAKSLEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPVGPLQHQLQHEAQRQQQHQQLSSLEDSHSNDDSKSPHPSCTSPFYKDSPVQQQQQQQQQQQQRRDDSQRRSVKPDEMSQDKMARIYQEELAKLMTRTPRDTFPSFLFPHFFSAAGGLPPTNSAMPPDDNIRMAFEAYHREMAKLQQNSSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEIKVNGQRNSMESCDSNQTKEANDEAGLRHSSAFSLVRNKPESTPILCSNSNPNTNSAAPSPLSNSILQPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAQAQAASEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSEMSETPRSSLSGAGMQSRTSRRKPAAPQWVNPDWQGDGKSGLIPPMPTGGASDKEVIINGVCVMQQQAADYSRKSANADDDDDGASDANDDEPSVHHRMQSSDCEDPPADIDQRYMEPEVRIKQEEDCDSNDSHQDDHDSDLRKLTHNRDDDDDTPGAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00976241;
- 90% Identity
- iTF_01299807;
- 80% Identity
- iTF_01300728;