Rcam024343.1
Basic Information
- Insect
- Rhingia campestris
- Gene Symbol
- ct
- Assembly
- GCA_932526435.1
- Location
- CAKOBE010000233.1:1000511-1016476[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6e-27 1.9e-22 79.9 0.0 3 71 550 619 548 625 0.94 2 3 2.2e-32 7.4e-28 97.2 0.0 3 77 979 1054 977 1056 0.96 3 3 3e-31 9.8e-27 93.6 0.0 3 77 1196 1271 1194 1273 0.96
Sequence Information
- Coding Sequence
- ATGCGCACATACGGGTTGATGATTGCACTCGAGGGACGATACACAGTCGGTGTTTGGATTCAAGCTCCCTACGTAATTCCCAGAGGTACCCTTGAAACGTTTAAAGACACAAAAAGTAGCGATTTACAGACAAAAACTTGCCCGAAGAGAAAGGAAATTATTAAAGCACTTATCGACGAGGTAAACCGACTGCAAGCCCTCCAAGAAACCCACATTGTACAAATACAAAGACTTGAAGATAATCTAGAAGCGAAACGTCAACACATTCTGCGGCTGGAGGACCGTTTGGAGGTGCCAAAGTTCGCCGAAGATTGCTCTGCAGCGGCCAAGTCCAGCAGCACGGATGAGTACCACGAGGATCAGCCAGAAACAGCAATATCTGCAGTAGTTTCTGAGGCGCCAACGGTAGTGCCAGAAGAGGTCCACATCAAAAAGGAAACTCAGACACCAACCGCACTCGACATCACCACCGCCGCTGCTGCTGCTGCTGCAGCTGTCGCGAATGATCCCAAGCAGTTCCAAGAACTTTTACTCGAAAGAACCAAGGCACTGGCGGCTGCTGCACACGCATCCAGCGAAGCACTGAAATCTGAAGGAATTTCCAGTGACTCGACCGTAGCAGATACCACGTCGTATACCAAGGCTGCTGACAATGAGCCCGCAGACCTTAGCAGCGACCCGAACGATTCGAGTCAGCAGCAAGAAGTGCGACCACCATCGGAATCGGCTACCGATGCAATTCCATCGTCGAATTTCGCGAGTGTTGATCAGTTTGGTTCGCTGCTGGGCGGTGAGTTGGTGAACTCGTATTGGCGTCGTGGCTTTGATTTGTCGGCGGAACTGAAATTGCCACCGCCACAACATCATATGCCATTGGCGCCACCACCTCCGCAACAACAGCAGCAGCCATCACCAGCAACGGCGGCCGTGTCAATAGCACATCCACCACCACCGCCACCACCATCAATAGCGACAGCAATTCCAACCTCTAAAACGCCAACATCGATTTTCCAAAATTTCCCATCAATTCTTTCGTGCCGATCGCCACCACCACTTCCGATGGCGGCCACGGGACCATCAACCACCACACTCTTGAGTCAGCTAGTCAATTCAACCTTCTCATCCAATTCAACCCCTTCTCTTCGAACAGATACCCATCCTTCGTTATCGTTGTCGTCGTCCTCGTCCTCGTCGACCACAACCACAGGCGCCCACCTGCAACAGTCCGCGCATCATCACCTACACCATCATCATCAGCAGCTTCCGCACCAGCATCCTGCCCTACAACACCATCATCAGGACTACGAGAAGGCCAATAGTCATCACGACTCGTCATCGACGGCCAGCACGCCCAATCTCCAGGACCAACGTTCCAATGACGAGCATATGAACGGCGGCAAGTCGGCCAAGTCCCTGGAGGATAACAACAACTCTCTGGGCTCGTTGGCCCACCTACCACCAGCATTCCTGCCAGGCCTGCCATTCCAATTCCAAGATCGCGGTCACTTCCGTTTCGCCGAGGATATACAGCTACCACCCGGTGCATCGATGGCCGGTCGTCTCGGCGAATCACTTATACCCAAGGGCGATCCCATGGAGGCTAAACTCCAAGAAATGCTTCGCTACAACATGGACAAGTATGCCAATCAAAGTTTGGATACCCTACACATATCACGACGCGTACGCGAACTCCTCTCCGTGCACAACATCGGACAGAGACTCTTCGCCAAGTACATTCTCGGCCTATCACAAGGCACCGTATCCGAGCTGCTGTCCAAGCCAAAGCCCTGGGATAAATTGACTGAGAAAGGCCGTGACAGTTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGCTGCTCAAGTCGCTGATACCAAAAAAAGACTCGGGCATGCCACAATATGGTCGCAATGAGGACTCCATGTCGGATGATCGCATTGCACACATTTTGAACGAAGCTTCCAGCCTTATGAAGACCCCTCAGGGACCTGGTGGTCAGTTGCAACAACAAATGCAGCACGAAGCCCAGCGCCAGCAACAGCATCAACAGCATCAACAGCTGTCCTCGCTTGAGGATTCACACAGCAATGATGATTCAAAGTCTCCGCATCCCTCGTGCACTTCGCCGTTCTATAAAGACTCACCAGTGCAGCAACAACAACAACAGCTGCAGCAGCAACAGCAACGACGTGACGACTCTCAGCGTCGCAGTGTAAAGCCCGATGAAATGTCTCAGGACAAGATGGCGAGAATTTACCAAGAGGAGTTGGCAAAGCTGATGACGCGCACACCACGCGACACCTTCCCAAGTTTTCTGTTTCCACACTTTTTCAGTGCGGCTGGTGGCCTACCGCCCACCAACAGTGCGATGCCACCAGATGACAACATTCGCATGGCCTTCGAGGCTTACCACCGCGAGATGGCCAAGTTGCAGCAAAATAACAGCGGCAACATTCCGAACTTCCCGAACTTCTCCAGCTTGATGGCTCTGCAGCAGCAAGTTTTGAACGGCGCTCAGGACCTGTCCGTGCCGAAGGAGAACGAAATGAAGGTGAATGGTCAACGCAATTCCATGGAGAGCTGCGACTCAAATCAAACCAAAGAAGCCAACGACGAGGCGGGTCTGCGTCACTCAAGTGCATTTAGCTTAGTCCGTAATAAACCAGAATCCACTCCAATATCGTGCTCCAACTCCAACCCCAACACGAATTCGGCTGCTCCCAGTCCACTTAGCAACTCGATTCTTCAGCCGGCAATGACGCCCACCGAGGACTTCTCGACTGCTGCCAGCCCCCTGCAGCGGATGGCATCAATCACCAACTCACTGATCACACAGCCTCCGGTGACGCCACACCACTCGCAACCGCAAAGACCGACAAAGGCCGTACTACCACCCATCACTCAGCAACAGTTCGACATGTTTAACAATCTAAACACTGAAGACATTGTTCGCCGCGTCAAAGAAGCCCTCTCGCAGTACTCCATCAGCCAAAGGCTGTTCGGAGAGTCAGTCCTGGGTCTGTCGCAAGGATCTGTGTCGGATCTTCTCGCGAGACCCAAACCCTGGCATATGTTGACCCAAAAGGGCCGTGAACCCTTCATTCGAATGAAAATGTTTTTGGAAGACGAAAACGCTGTGCATAAGCTGGTGGCCAGTCAATACAAAATTGCTCCGGAGAAACTGATGCGCACCGGCAGTTACAGTGGCAGTCCGCAAATACCCCAAGGCCTCGCCAACAAGATGAACAGCATTCCAATGCAGAAGATGATGAACGAGCTGAAAATGCAGGAACCCCAAGCCCAGCATATTATGCAGCAAATGCAGGCCGCATCTGCAATGGCAGCAGCCGCCGCTGCTGGTCACATGCAAAATGCCCAGCATCAGGGTATGTTACTTACAACACCCGGTCTTCCACCACAACACGCCATAAGCCTGCAGCAAGCACAAGCGCAAGCCGCTAGCGAGAAAAAGCCAATGATGATGCCAATCCACTCACCGCATCAAGCTAATGCCATGCGAAGCAGCATGCACCAGCACATGTCTCCAACCGTCTATGAGATGGCTGCCCTCACACAAGACCTCGACACACAAGTCATCACCACAAAGATCAAGGAAGCTCTCCTAGCTAACAACATCGGCCAGAAAATTTTCGGGGAAGCAGTGCTGGGTTTGTCACAAGGCTCCGTGTCTGAGTTGCTGTCAAAACCAAAACCATGGCACATGCTAAGCATTAAGGGCCGAGAACCTTTCATCCGAATGCAGTTGTGGCTGTCCGATGCCAACAATGTCGAGCGATTGCAGGTACTTAAGAACGAACGACGTGAAGCTAGCAAACGCCGTCGGTCTACAGGGCCAAACCAACAGGACAATAGCTCAGACACCAGTAGCAATGATACCGCCGACTTTTACACCAGCAGTCCTGGACCAGGCTCAGTGGGATCAGTAGGAGCACCACCCAACAAGAAGCAACGCGTCCTCTTCTCCGAAGAACAAAAGGAAGCCCTCCGTCTGGCTTTCGCCCTCGATCCCTACCCAAATGTGGGAACAATTGAATTCCTAGCCAACGAGCTGGGTCTTGCAACACGCACTATCACCAATTGGTTCCACAATCACCGAATGCGACTCAAGCAGCAAGTGCCGCATGGTCAGCCCACGGAACCGGTTCCCAGCCGAGAGAACACCAACGCGACACCCTTCGATCCCGTCCAATTCCGTATACTCCTCAATCAAAGACTGATGGAATTGCAAAAAGAGCGCATGGGGCTGAGTGGCGCACCGATCCCTTACCCACCGTACTTTGCTGCCAACCCCAATCTTGCAGCGCTCATCGGACGCGGTCTCCTCCCCGGAGGTGGTGAACCTGATCTACAAGCCCTCAACAACGCCTTCAAGGAGCAAATGAGTGGTCTCGATCTGTCTCTGAAGCGGGAACGCGACGATGACTTCGAGGACGACGGTGAGGGCGACAGCCACCTCTCCGACAACGAGTCTATCAACGGAAGCGACGAAAAGTCTGAGATGAGTGAAACCCCGCGCTCGTCCTTATCCGGAGCGGGCATGCAATCGCGAACATCCCGACGCAAGCCTGCTGCTCCCCAATGGGTCAACCCTGATTGGCAGGGAGACGGCAAATCTGGACTCATGCCTCCAATGCCCACCGGTGGTGCCTCCGACAAGGAAGTCATTATCAACGGCGTCTGCGTGATGCAGCAACAAGCTGCCGACTACAGTCGAAAATCAGCAAACGCCGATGACGACGATGACGGTGCATCCGATGTCAACGACGATGAACCATCAGTCCATCATCGCATGCAGTCGTCCGACTGTGAAGACCCACCCGCGGACATTGACCAGCGTTACATGGAGCCCGAGGTACGAATCAAACAAGAAGAAGACTGTGACAGCAACGATAGCCATCAAGACGATCACGATTCCGACCTAAGAAAACAGCCACACCACCGGGATGACGATGACGACACACCCGGCGCATGGAACTACTAA
- Protein Sequence
- MRTYGLMIALEGRYTVGVWIQAPYVIPRGTLETFKDTKSSDLQTKTCPKRKEIIKALIDEVNRLQALQETHIVQIQRLEDNLEAKRQHILRLEDRLEVPKFAEDCSAAAKSSSTDEYHEDQPETAISAVVSEAPTVVPEEVHIKKETQTPTALDITTAAAAAAAAVANDPKQFQELLLERTKALAAAAHASSEALKSEGISSDSTVADTTSYTKAADNEPADLSSDPNDSSQQQEVRPPSESATDAIPSSNFASVDQFGSLLGGELVNSYWRRGFDLSAELKLPPPQHHMPLAPPPPQQQQQPSPATAAVSIAHPPPPPPPSIATAIPTSKTPTSIFQNFPSILSCRSPPPLPMAATGPSTTTLLSQLVNSTFSSNSTPSLRTDTHPSLSLSSSSSSSTTTTGAHLQQSAHHHLHHHHQQLPHQHPALQHHHQDYEKANSHHDSSSTASTPNLQDQRSNDEHMNGGKSAKSLEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGMPQYGRNEDSMSDDRIAHILNEASSLMKTPQGPGGQLQQQMQHEAQRQQQHQQHQQLSSLEDSHSNDDSKSPHPSCTSPFYKDSPVQQQQQQLQQQQQRRDDSQRRSVKPDEMSQDKMARIYQEELAKLMTRTPRDTFPSFLFPHFFSAAGGLPPTNSAMPPDDNIRMAFEAYHREMAKLQQNNSGNIPNFPNFSSLMALQQQVLNGAQDLSVPKENEMKVNGQRNSMESCDSNQTKEANDEAGLRHSSAFSLVRNKPESTPISCSNSNPNTNSAAPSPLSNSILQPAMTPTEDFSTAASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAAAAAAGHMQNAQHQGMLLTTPGLPPQHAISLQQAQAQAASEKKPMMMPIHSPHQANAMRSSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSGAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSEMSETPRSSLSGAGMQSRTSRRKPAAPQWVNPDWQGDGKSGLMPPMPTGGASDKEVIINGVCVMQQQAADYSRKSANADDDDDGASDVNDDEPSVHHRMQSSDCEDPPADIDQRYMEPEVRIKQEEDCDSNDSHQDDHDSDLRKQPHHRDDDDDTPGAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00976241;
- 90% Identity
- iTF_01299898; iTF_01300728; iTF_01300601;
- 80% Identity
- iTF_01299898;