Rros023205.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- Kdm5_3
- Assembly
- GCA_949824845.1
- Location
- OX463759.1:12481347-12483445[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-22 3.7e-19 69.6 0.2 2 88 114 196 113 197 0.93 2 2 6.7 1.8e+04 -3.1 0.0 35 46 589 600 588 604 0.69
Sequence Information
- Coding Sequence
- ATGGAAACAAGAAGCCGTAAATCGCCAGCAAAAACATCTCAGAAAAATCGGAAAAGAACACCAAACGAAATGTCTTCGACACGACGCCCTACCATTAACACCGCCGAACCATTAGCATTTCAGCCGCCGGAGGAATGCCTGGTATTAAATCCAACCGAGGAGGAATTTGAAAATTCCCATTCGTACATAAGCAAAATACGACCTTTTGCCGAGCAGTACGGCATAGTCAGAATAATACCACCAAAGAGTTGGAAGCCGCCGTTTGCTGCTAATGTTGACGAATTCGAATTTACTCCTGTTCTACAGATTTTAAATGAAATGGATGCAGTAACACGGGTAAAgcttaattttttggaaaaagtcGCAAAGTTTTGGGAGCTGCAGGGCATATCTATGAAGATTCCTTTAGTCGAGAAAAAACCATTAGATTTGTATTCCCTCAATCGAATAGTTCATGAATTTGGGGGTTTCGAACAGACAACAAAAGACCGCAAATGGTCAAACGTTGCAAAGCTTATGAACTTTTCGGCACATAAAGACACCGGCCGAGTTTTGAAGACTCACTACTTGCGACTGCTTAAACTCTTTTCTAAATTTACATCCAACGTAGACATCGAACTTAACCAGGAGTTCGACCCTGAAAATGTACCTTTAACCAAGCCCGTTTCAAGTCCCAAATCATCATCCGTAACAAATTATCACTTTCGGGAGGTAAGATGTTACATCTGTAAACGCACCGACATGAAGGAGGCTATGTGTATCTGTAGCCGATGCAAAGACCGCTACCACACATTTTGCTTAGTGCCGCCATTGACCGACATACCACACCACGGTTGGCGTTGTCCACGTTGTATAATAGAGGGATCGATCAAACCAGCATATGGCTTCGATGCAAGCAAACGCAAATACAATTTGCATGATTTTGGTCAAATGGCAGATCAATTCAAGGAGGAATATTTCCATCAACCATGGCATCAAGTATCCACTGAAACGGTAGAACAAGAATTCTGGCGAATAGCTTCGTCAATAGATGAAGACGTTCTGGTGGAATATGGTACAGATCTAAACACAATGGACCTTGGATCTGGCTTCCCAATCAAAAACTCCTTGGATTTACTGCCCGATGATATGCAGTATGTCGATTCCAGTTGGAATTTGAATAACTTCCCAAAAATGGAGGAATCAGTTATGAGGTACATTACTGGGGATATTAGCGGTGTTCAAGTTCCATGGACGTACGTTGGCATGTGTTTTTCTACATTCTGCTGGCACGTTGAGGACCACTGGAGTTATTCAGTCAATTACCTTCACTGGGGTGAGCCAAAGACCTGGTATGGAGTACCAAGTAGCTATGCGGATATGTTGGGAAGTGTCATGAAGAAAAAGGTACCAGAGTTGTTTGAAATGCAGCCCGATTTGTTGCATCAACTTGTGACAATTTTTAATCCAAATATTCTGATGGAAAATGGTATTCCCGTTTATCGAACTGATCAAAAAGCTGGGGAGTTCGTCATAACATTTCCACGCGCATATCATGCCGGATTTAACCAAGGCAACAATTTCGCTGAATCTGTTAATTTTGCAACTGCAGATTGGCTGAGGATGGGACGCGATTGTGTAAGACACTACTCGGAATCGGGTCGGAACTGTACTTTCTCACATGATGAGCTCATCTGTAATATGGCATTAGTACCGGAAAAACTCAGCGCGGATATGGCATCGGAGTGCTATCTACAAATGACCGAAATGTTAGGTAACGAGAAAAAACTCCGAAAAATTGTGCAAGAACGGGGTACTATGAACCTGAAGCGCAGGGTGTTCGAAAGCATTGACGACGAAGAACGACAGTGTGGAGTCTGCCAAACCACATGCTTTTTGTCTGCAGTTTCATGTGACTGCACCAATCAAATAGTATGCCTACAACATCACTCGGAGTTGTGCAGGTGCGACCCGCAAGAACACTGTTTGCAGTACCGCTATACCATAAATGAAATGACGCGTATGGTCGGAAGACTGAAGGCAAACGTAAACAAAACCTAG
- Protein Sequence
- METRSRKSPAKTSQKNRKRTPNEMSSTRRPTINTAEPLAFQPPEECLVLNPTEEEFENSHSYISKIRPFAEQYGIVRIIPPKSWKPPFAANVDEFEFTPVLQILNEMDAVTRVKLNFLEKVAKFWELQGISMKIPLVEKKPLDLYSLNRIVHEFGGFEQTTKDRKWSNVAKLMNFSAHKDTGRVLKTHYLRLLKLFSKFTSNVDIELNQEFDPENVPLTKPVSSPKSSSVTNYHFREVRCYICKRTDMKEAMCICSRCKDRYHTFCLVPPLTDIPHHGWRCPRCIIEGSIKPAYGFDASKRKYNLHDFGQMADQFKEEYFHQPWHQVSTETVEQEFWRIASSIDEDVLVEYGTDLNTMDLGSGFPIKNSLDLLPDDMQYVDSSWNLNNFPKMEESVMRYITGDISGVQVPWTYVGMCFSTFCWHVEDHWSYSVNYLHWGEPKTWYGVPSSYADMLGSVMKKKVPELFEMQPDLLHQLVTIFNPNILMENGIPVYRTDQKAGEFVITFPRAYHAGFNQGNNFAESVNFATADWLRMGRDCVRHYSESGRNCTFSHDELICNMALVPEKLSADMASECYLQMTEMLGNEKKLRKIVQERGTMNLKRRVFESIDDEERQCGVCQTTCFLSAVSCDCTNQIVCLQHHSELCRCDPQEHCLQYRYTINEMTRMVGRLKANVNKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01300596;
- 90% Identity
- -
- 80% Identity
- -