Rros023204.1
Basic Information
- Insect
- Rhingia rostrata
- Gene Symbol
- Kdm5_2
- Assembly
- GCA_949824845.1
- Location
- OX463759.1:12462074-12464224[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-24 6e-21 75.4 0.1 2 88 91 173 90 174 0.94 2 2 8.8 2.4e+04 -3.5 0.0 35 45 604 614 603 618 0.69
Sequence Information
- Coding Sequence
- ATGTCTTCGATACTACGCCCTCCCATTAACACCGCCGAACCACACGTATTTCAGCCGCCGGAGGAATGTCTGGTATTTAGTCCAACCGAGGAGGAATTTCGTAATGCCCTTTCTTATATTAGCAAAATACGACCTTTTGCCGAGCAGTACGGCATAGTTAGAATAAAACCACCAAAGAGTTGGAACCCGCCGTTTACTGTTAATGTTGACGAATTCAAATTTACTCCTGTTGTACAGATTTTAAATGAAATGGATGCAGTAACACGGGTTAAGctaaattttttggaaaaagttgCAAAGTTTTGGGAGCTGCAGGGCATAGCTATGAAGATTCCTTTAGTCGAGAAAAAACCATTAGATTTGTATTCCCTCAATCGAATAGTTCATGAATTTGGGGGTTTTGAACAGACGACAAAAGACCGCAAATGGTCAAACGTTGCAAAGCTTATGAACATTCCGGCACATAAAAACATTGGCCGAGTTTTGAAGACTCACTACGAGCGACTGCTTAAACCCTTTTCTAAATTTACATCTAACGTAGTCATCGGATTTAACCAGCAATTCGACCGTGAAAATGTACCTTCAACAAGCATGGAGTTCGCCAGCGGCATACAAACGGCACCCACGCACATAAAACCGGAAGATGAAGGAAATTCTGATCCCATAAAAGTATTTAATGGCAAACATGGGGTGATGCGCGTTTCAAGTCCCAAATCATCATCCGTATCGGACGAAAAAAACCTTCACTTCCCGGAGGTAAGATGTGACATCTGTAATCGCACCGACATGGAGGAGGCTATGTGTGTCTGTAGCGGATGCCAAGACGGCTACCACACATTTTGCTTAGAGCCGCCATTGACCGAAGTACCATACCGCGCTTGGCATTGTCCACGTTGTATAATAGAGAAATCAAACAAACCAGCAACTGACTTCGAGCCAAGCCAGCGCGAATACAATTTGCATGATTTTGGTAAAATGGCAGATCAATTCAAGGAGGAATATTTCCATCAACCAGGGTATCAAGTATCCACTGAAACGGTGGAACGAGAATTCTGGCGAATAGTTTCGTCAATAGATGAAGACGTTGTGGTGGAATATGGTTTAGATTTAAACACCATGGACCTTGGATCTGGCTTCCCAATCAAAAACTCCTTGGATTTACTGCCAGATGATATGCAGTATGTCGATTCCAGTTGGAATTTGAATAACTTCCCAAAAATGGAGGAATCAGTTCTGAGTTACATTACTGGCGAAATTAGCGGTGTTCAAGTTCCATGGATGTACGTTGGCATgtgtttttcttcattctgcTGGCACGTTGAGGACCACTGGAGTTATTCAGTCAATTACCTTCACTGGGGTGAGCCAAAGACCTGGTATGGAGTACCAAGTAGctatgcggagatttttgaaaGTGTCATGAAGAATAAGGTACCAGAGTTGTTTGCATTGCAGCCCAATTTGTTGCATCACCTTGTGACTATTTTTAATCCAAATATTCTGATGGCAAATGGTATTCCCGTTTATCGCACTGATCAAAAAGCTGGGGAGTTCGTCATAACATTTCCACGCGCATATCATGCCGGATTTAACCAGGGCAACAATTTCGCTGAAGCTGTTAATTTTGCAACTGCAGATTGGCTGAGGATGGGACGCGATTGTGTAAGACACTACTCGGAATCGCGTCGGATCTGTACATTCTCACATGATGAGCTCATCTGTAATATGGCATTAGTACCGGAAAAACTCAGCGCGGATATGGCATCGGAGTGCTATCTACAAATGACCGAAATGTTAGGTAACGAGAAAAAACTCCGAAAAATTGTGCAAGAACGGGGTACTATAAACCTGGAGCACAGGGCGTTCGAACGCATTGACGACGAAGAACGACAGTGTCGAGTCTGCCAAACCACATGCTTTTTGTCTGCAGTTTCATGTGACTGCACCAGTCAAATAGTATGCCTGCAACATCACTCGGAGTTGTGCAGGTGCGACCCGCAAGAACACTGTTTGCTGTACCGCTATACCATAGATGAAATGACGGGTATGGTCGGCAGACTGGAGGCAAACGTAGACAAAACCGAGAATTGA
- Protein Sequence
- MSSILRPPINTAEPHVFQPPEECLVFSPTEEEFRNALSYISKIRPFAEQYGIVRIKPPKSWNPPFTVNVDEFKFTPVVQILNEMDAVTRVKLNFLEKVAKFWELQGIAMKIPLVEKKPLDLYSLNRIVHEFGGFEQTTKDRKWSNVAKLMNIPAHKNIGRVLKTHYERLLKPFSKFTSNVVIGFNQQFDRENVPSTSMEFASGIQTAPTHIKPEDEGNSDPIKVFNGKHGVMRVSSPKSSSVSDEKNLHFPEVRCDICNRTDMEEAMCVCSGCQDGYHTFCLEPPLTEVPYRAWHCPRCIIEKSNKPATDFEPSQREYNLHDFGKMADQFKEEYFHQPGYQVSTETVEREFWRIVSSIDEDVVVEYGLDLNTMDLGSGFPIKNSLDLLPDDMQYVDSSWNLNNFPKMEESVLSYITGEISGVQVPWMYVGMCFSSFCWHVEDHWSYSVNYLHWGEPKTWYGVPSSYAEIFESVMKNKVPELFALQPNLLHHLVTIFNPNILMANGIPVYRTDQKAGEFVITFPRAYHAGFNQGNNFAEAVNFATADWLRMGRDCVRHYSESRRICTFSHDELICNMALVPEKLSADMASECYLQMTEMLGNEKKLRKIVQERGTINLEHRAFERIDDEERQCRVCQTTCFLSAVSCDCTSQIVCLQHHSELCRCDPQEHCLLYRYTIDEMTGMVGRLEANVDKTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01300597;
- 90% Identity
- -
- 80% Identity
- -