Basic Information

Insect: Rhingia campestris
Gene Symbol: -
Assembly: GCA_932526435.1
Location: CAKOBE010000035.1:1687780-1695407[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.14 19 6.8 3.9 1 20 39 58 39 61 0.93

2 26 2e-06 0.00028 22.0 1.7 1 23 68 90 68 90 0.98

3 26 0.089 13 7.4 0.3 2 23 123 145 122 145 0.93

4 26 7e-05 0.0097 17.2 1.6 1 23 215 238 215 238 0.95

5 26 0.002 0.28 12.5 5.7 1 23 245 267 245 267 0.98

6 26 5.7 7.9e+02 1.7 5.0 1 20 275 294 275 296 0.93

7 26 0.00012 0.017 16.4 3.9 1 23 321 343 321 343 0.97

8 26 2.4 3.4e+02 2.9 0.2 2 23 357 378 356 378 0.94

9 26 0.012 1.7 10.1 0.5 1 23 451 474 451 474 0.96

10 26 0.0043 0.6 11.5 2.8 2 23 544 565 543 565 0.98

11 26 1.4e-06 0.00019 22.5 1.1 1 23 572 594 572 594 0.99

12 26 0.001 0.15 13.5 3.6 1 23 731 754 731 754 0.96

13 26 0.00041 0.057 14.7 1.4 1 23 791 814 791 814 0.98

14 26 0.029 4 8.9 1.4 1 23 825 847 825 847 0.97

15 26 4.4e-07 6.1e-05 24.1 0.8 1 23 854 876 854 876 0.98

16 26 0.0013 0.19 13.1 0.5 3 23 901 922 900 922 0.97

17 26 0.0014 0.2 13.0 1.4 1 23 961 984 961 984 0.95

18 26 1.2 1.7e+02 3.8 3.2 1 22 991 1012 991 1012 0.95

19 26 0.35 49 5.5 0.5 1 23 1021 1044 1021 1044 0.88

20 26 0.0046 0.64 11.4 1.2 1 19 1050 1068 1050 1069 0.95

21 26 0.00011 0.016 16.5 4.0 1 23 1080 1102 1080 1103 0.96

22 26 1.3e-05 0.0019 19.4 0.3 2 23 1124 1145 1123 1145 0.95

23 26 0.00043 0.06 14.7 4.3 1 23 1151 1173 1151 1173 0.99

24 26 1.7e-07 2.4e-05 25.4 3.4 1 23 1179 1201 1179 1201 0.98

25 26 1.4e-07 2e-05 25.6 2.4 1 23 1207 1229 1207 1229 0.99

26 26 0.00041 0.057 14.8 0.2 1 23 1235 1259 1235 1259 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.14	19	6.8	3.9	1	20	39	58	39	61	0.93
2	26	2e-06	0.00028	22.0	1.7	1	23	68	90	68	90	0.98
3	26	0.089	13	7.4	0.3	2	23	123	145	122	145	0.93
4	26	7e-05	0.0097	17.2	1.6	1	23	215	238	215	238	0.95
5	26	0.002	0.28	12.5	5.7	1	23	245	267	245	267	0.98
6	26	5.7	7.9e+02	1.7	5.0	1	20	275	294	275	296	0.93
7	26	0.00012	0.017	16.4	3.9	1	23	321	343	321	343	0.97
8	26	2.4	3.4e+02	2.9	0.2	2	23	357	378	356	378	0.94
9	26	0.012	1.7	10.1	0.5	1	23	451	474	451	474	0.96
10	26	0.0043	0.6	11.5	2.8	2	23	544	565	543	565	0.98
11	26	1.4e-06	0.00019	22.5	1.1	1	23	572	594	572	594	0.99
12	26	0.001	0.15	13.5	3.6	1	23	731	754	731	754	0.96
13	26	0.00041	0.057	14.7	1.4	1	23	791	814	791	814	0.98
14	26	0.029	4	8.9	1.4	1	23	825	847	825	847	0.97
15	26	4.4e-07	6.1e-05	24.1	0.8	1	23	854	876	854	876	0.98
16	26	0.0013	0.19	13.1	0.5	3	23	901	922	900	922	0.97
17	26	0.0014	0.2	13.0	1.4	1	23	961	984	961	984	0.95
18	26	1.2	1.7e+02	3.8	3.2	1	22	991	1012	991	1012	0.95
19	26	0.35	49	5.5	0.5	1	23	1021	1044	1021	1044	0.88
20	26	0.0046	0.64	11.4	1.2	1	19	1050	1068	1050	1069	0.95
21	26	0.00011	0.016	16.5	4.0	1	23	1080	1102	1080	1103	0.96
22	26	1.3e-05	0.0019	19.4	0.3	2	23	1124	1145	1123	1145	0.95
23	26	0.00043	0.06	14.7	4.3	1	23	1151	1173	1151	1173	0.99
24	26	1.7e-07	2.4e-05	25.4	3.4	1	23	1179	1201	1179	1201	0.98
25	26	1.4e-07	2e-05	25.6	2.4	1	23	1207	1229	1207	1229	0.99
26	26	0.00041	0.057	14.8	0.2	1	23	1235	1259	1235	1259	0.92

Sequence Information

Coding Sequence: ATGAGTGGTGGTTCAAAAGTTACCGATATTAAAAAATCCAAAACTCAAATGAAAACCCGAGGTCAACGATCCCTTCGCAGTCAAACTAAGAAAATGAAAATCACTGCCGGGCGATTTGAGTGCGATTCCTGTAATAAAACGTTCGCTTGGAAAAAGGACCTATTCCGACATGAAAAATGCCACGAGCCAAATACAAAGAAGTACTCCTGTCCACACTGCGATCGTCGATTTATTCGAAAAGATAAGCTCTCATCACATATACTCGTACATTTGGCTGGTAAGACCAGTGCTACTCCCAAGCGATCTATAAAAAGCTTGCAATATTATTCGAATCTTTTATATTCTGAAAGCCGATTCATAGAAATCAAATGTATGCTCTGCAACTACAAGAGTTCGTCAAATGTATCCGAGCTTCGTCGCCACATTATCGCACATGATAACGTGGGACTGATAGAAGATTTGGAAAACAGTGAAGTAGTAAAGAGATTTTATCCAGGCAGGGATATGCAGGAAGTAATTGCATTGCTTGGTAGTCAAATCGCAGATGGACAGTTGGACAAATTGTACTCAATTGTAAATGAGAACACTTTTGAGATGGGTATAAGCGATTCGGATGATAGTGATCCGGAGATGAAAATCGTCTACACCTGTGAAGTGTGCAACGAGGCTTTCAATCGAAAGCACAAACTTATGTCACATCAGGCATACGAGCACACTTTTGAAGAATGTCCCTACAAGTGTGAGACTTGTAAGCTAAAGTTCACCAGCAAACATGTGCTGAAGTCACATTTGAAATACCACTGCGAGAACCCTGAAAAAGAGTTCCATTGCAAGAAGTGTCCGGCTCGGTTCATGTGGCACAAGAACCTTAAAAATCACAGATGTGCCACTATAACATTTACAACTTCCGATAAGGATCTTTCTGTTAAGAAAAAAACGGACATACCGGATGGAAGGGCGCACAGTTGCACGGTGTGCGGTGAGAAATTCCTTCGGCCGCATAATCTGCGTAGACATGTGAAGACACATGATCAGAGGGCAACTACCGCCTTGCGTGCGAAACGAATCGTGTGCTTACTATGCAATGTGGAGTTTTCGGAGATGCGTCAATTAAAATTCCACCTATTATCTCATTCCGATGGCCAGACAGGTGTGAACTTTGCGAACTGTGAATTTGTAACGAACTTCTATCCGAATGAGGATCAATTTGCCATATCCGAGCACATCAGGGCTTGTTTTAAGGAGCAAAGACTTTGGCAACTCTACATGGCAGTGAATAAGTTTAATCATGAGATGATCTTGAGCGACTCGGACAGTGAAGATGAAGCAAAGTCGTCGGAAACACCGTCATATGCCTGCGAGCTGTGCAATGTAAAATTTACACGTCTACGAGACACCTTTCAGCATCAACTAATTGATCATGCTTCCGACAAAACTTTGCCTCAGAAGTGCACAAAGTGTGAAGATCAATTTGTTTGCCGTGCTCTTTTAGTTCGTCACGCAAAGTGTGAATGCTCAACAGTGGATAGGATCCATACATGCAAAGCATGCGGGGCTGCTTTCATTTGGGAACAACATTTTGCCGCTCATAGCTGTCCGCTCGCTGAAAAGCCCACCGAAGATAATAAGCAATGCGATGTATGCGGGAAAAAGTTTATTTGGATGAAAGACCTCCACCGACACAGGCGTTCCCACGTATCAGATGAGAAGAAATTCCAATGTCTAATATGCGAGCGTAAATTCAACCGAAAAGATAACATGACAGCTCATATGAAAGTGCACTCCGCGGACCATCAAGACCAGAAGGCAAGAGCGGTGGTGAAATGGGAACAACAGGACGATAATATGTGTAGGCCACACGGTGTCAAAAACATCCAGTGCAAGATCTGCTTGTCCAAGCACAACTCTATTCGCGACTTGGCAACACATTTGATGACGCACAAGGATCAGGAGTCGCTCAAGTCTAGAGAAGTGGAAATTGATGAAATTTCCATGCTGCTGTATAATAGGCAAATGGACATCCAAGAGCTAACCAATGAAATTCGTAATGACCTTGCGAATGGCACGAACATGCGTTTCTATTCGATCACAAACGAAGTGGGCTACGAGTTAAATTTGATTGATTCGGAAACGAGTTCAGATTTAGATGCAGAGGACTTTGACGATGACGAGAATTGTAAGCCAAAGGGATACATTTGTGAGCTATGCAGAAAATCGTTCAATAGAAAGTTTAAGTTCTTCGAACACCAGAAAAACGAACACTCATGGAAAGAACTACCATTTGAGTGTACGACCTGTAGCGCAAAGTTTGCCTGCGAAAACCTATTTAACTGTCATATGCAAGCGGAGTGCGAGAGCAGTGGCAAGCAGTACAAGTGCAAGCAATGTCCGGTGCGATTTACATGGAAAGAGAATTTAAAGACACACGAAAGGCGTGAACACGATAAGAACCATCCAGTGCAGTCAAAGAAATATCCTTGCAGTTCGTGTGATAAGAGTTTCCTCTGGCAGAGAGACTTGATGAAGCACAAGAAGACCCACCAGACTGAGGAGGAGAAATTCGAATGTACGTGGTGCTTTAGGGTGTTTGTGCGAAAGGATAATCTTAAGGTTCACATGAAGGTTCATCAAAACACTACACATCTGCTGCTGCCCGACATCTACTATCTAGCCCGACCAAATGGTTCCAAAAAGGCCAATTGTAAGCTCTGTGATCAAAAGTACACTCGCGTTCGGGACTTGCTGGAGCACATTCAAACCGTTCACCTTTGTATGCTCGAGAGCCTTCCAAATCCGACAAGTTATTCCATAACAAACGCTTTGGGCTACGAAATGGGAATCGAGGACTCTGAAACCGAAACAGAGGAGCAAAAGGAAAAGTACGCTTGTGAAATTTGCAATGCCCACTTCAATCGTCGCTTTAAACTACTGCAGCATCAGCAGGCGCTTCACTACTCCGACAATATACCCCACAAGTGCAATTTTTGCAACTTCAAATGTGTATCAGAGGTTGTGCTGAGCTACCACATGCGATCTCAATGCTTGAATATATCAAAGCAGTTTCGCTGCAGCAAGTGTACAATGCGGTTCATGTGGAAGGAGAATCTGGATAACCACGAGATTCTAATTCATGACAATCCTCGAACTCATACTTGTGAGATTTGCAAGAGAGATTTTGCCACCCAGCACGATTTGAAGGGACACAGTGACTGCAAACCACCGGCCGATGTTAAACTCTTCGAATGCAAAATGTGTGATCGCAAATATAACCGAAAAGATCGTCTAATGAAGCATGTAAAGGTTCACCACTCCGATTCTGCGCCGAAGGAACCACGTGCCAAAAGTACACAATCTACGGATAAAAAGTTTTtgtgcgcattctgcggtaaggaagtgtcgagttcttcaaatctagtgatacatatgcgccggcatacgggtgagaaacctttcaaatgtgagttttgcaataaaggttttccacgctcctcggatttgagttgtcaccgacgaacgcataccggggagcggccacacaagtgtacggtgtgtgataaagcgttttcgcggtcgtacaaacttcaaacacacatgcgcatacattcgggcgaaaggccttacaaatgcacgtactgtgacaagagctttactcaatcgaacgatttgacgctacatgtgcgaaggcacacgggcgaaaggccttatatttgtgagacttgtgGTGAGCGGTTTATTCAGGGAACAGCACTCCGAAATCACCGAAGGATGAGAGGACACTATGAGATGTAA
Protein Sequence: MSGGSKVTDIKKSKTQMKTRGQRSLRSQTKKMKITAGRFECDSCNKTFAWKKDLFRHEKCHEPNTKKYSCPHCDRRFIRKDKLSSHILVHLAGKTSATPKRSIKSLQYYSNLLYSESRFIEIKCMLCNYKSSSNVSELRRHIIAHDNVGLIEDLENSEVVKRFYPGRDMQEVIALLGSQIADGQLDKLYSIVNENTFEMGISDSDDSDPEMKIVYTCEVCNEAFNRKHKLMSHQAYEHTFEECPYKCETCKLKFTSKHVLKSHLKYHCENPEKEFHCKKCPARFMWHKNLKNHRCATITFTTSDKDLSVKKKTDIPDGRAHSCTVCGEKFLRPHNLRRHVKTHDQRATTALRAKRIVCLLCNVEFSEMRQLKFHLLSHSDGQTGVNFANCEFVTNFYPNEDQFAISEHIRACFKEQRLWQLYMAVNKFNHEMILSDSDSEDEAKSSETPSYACELCNVKFTRLRDTFQHQLIDHASDKTLPQKCTKCEDQFVCRALLVRHAKCECSTVDRIHTCKACGAAFIWEQHFAAHSCPLAEKPTEDNKQCDVCGKKFIWMKDLHRHRRSHVSDEKKFQCLICERKFNRKDNMTAHMKVHSADHQDQKARAVVKWEQQDDNMCRPHGVKNIQCKICLSKHNSIRDLATHLMTHKDQESLKSREVEIDEISMLLYNRQMDIQELTNEIRNDLANGTNMRFYSITNEVGYELNLIDSETSSDLDAEDFDDDENCKPKGYICELCRKSFNRKFKFFEHQKNEHSWKELPFECTTCSAKFACENLFNCHMQAECESSGKQYKCKQCPVRFTWKENLKTHERREHDKNHPVQSKKYPCSSCDKSFLWQRDLMKHKKTHQTEEEKFECTWCFRVFVRKDNLKVHMKVHQNTTHLLLPDIYYLARPNGSKKANCKLCDQKYTRVRDLLEHIQTVHLCMLESLPNPTSYSITNALGYEMGIEDSETETEEQKEKYACEICNAHFNRRFKLLQHQQALHYSDNIPHKCNFCNFKCVSEVVLSYHMRSQCLNISKQFRCSKCTMRFMWKENLDNHEILIHDNPRTHTCEICKRDFATQHDLKGHSDCKPPADVKLFECKMCDRKYNRKDRLMKHVKVHHSDSAPKEPRAKSTQSTDKKFLCAFCGKEVSSSSNLVIHMRRHTGEKPFKCEFCNKGFPRSSDLSCHRRTHTGERPHKCTVCDKAFSRSYKLQTHMRIHSGERPYKCTYCDKSFTQSNDLTLHVRRHTGERPYICETCGERFIQGTALRNHRRMRGHYEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01301076;
90% Identity: iTF_01301076;
80% Identity: -