Rcam018297.2
Basic Information
- Insect
- Rhingia campestris
- Gene Symbol
- Rel_1
- Assembly
- GCA_932526435.1
- Location
- CAKOBE010000154.1:493879-502579[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-50 1.1e-46 159.7 0.2 2 168 100 283 99 284 0.92 2 2 0.54 4.5e+03 -1.7 0.0 46 69 365 388 356 403 0.77
Sequence Information
- Coding Sequence
- ATGGCCATGCATAACCAGATCTATGATATGGATAAGCAATTGTGCTTTAGTGATGGCTCGATGTCGGTTCCTTCGCCGTGTTCATCTATATCATCATCGACGTCAGGATACTCAACATCCAATAACGCACAGACCATGAATTTCTCACAATACAGTATGACTGGAGGCGATATCAATATGATTGTGAACTCCCTGCCACCAACCCCACCCCTACATCCCAATCTCTCACAATTGGGACAAAGGATGCATATGAATCCTGTAAGCAATGACATTTCTGGAGGATACGTTAGCCAGCTTATTATCCTTGAACAACCAACTGAAAAGTTTCGCTTCCGTTACAAGTCGGAAATGCACGGAACTCATGGTTCCCTAAATGGTGAACGTTCAGAAAAAAACAAGAAAACCTTCCCCGAAGTCGAATTGATCAACTTTAACGGCACCGGGGTAATACGCTGCAGTTTGTATCAGACAAATCTGGATAAGCCATCGCCGCACTCCCATCAGCTGGTTGTGCGTAAGGACGACACGGACGAATGTGATCCACATGAATTGACCGTTGGTCCAGACAAAGGGTACATCGCACGATTTGAGAACATGGGCATTATACACACGGCAAAGAAGAATATCTGCGAAGCACTTTATATGAAAAAGATGAAAAAACTAAAATTCGAAATGGGCTATGAGAAACTGTCACAAAGTCAAGAGAAGACCTTGCGAGAGGAAGCAGAGCGCGAGGGAAAGCTAATGAACTTAAATCAGGTACGCCTCTGTTTCGAAGCCTTCAAAGTAGGCGATGGCAATGTTTGGACAAGAATCTGTGAGCCGGTATTCTCTCGTCCAATAAACAATCGCAAGAGCGCTCTAACGGGGGAATTGAAAATCTGTCGCCTAAGTGCAGTCGTTGGCAGCGCTGCTGGAGGTGAAGATTTGATACTGTTAGTCGAGAAAGTCAGCAAAAAAAATATACAAGTTCGCTTCTACGAATTGCGCGATGATGAAGTAGTTTGGGAAGCATACGGTGACTTTTCCGATGCCGATGTGCATCATCAGTATGCTATCACAGTACGTACACCAGCATATAAAAATAAAGACATCGTCTCGAATGTAACGGTTCATATCGAACTTGTCCGTAAAAGTGACGATGAACGAAGTCATTCACTTAGCTTCCGATATAAGCCGCGAGACGTAGTTATGTCGCGGAAACGCCGTCGAACATCATACATGTCATCGTCGTCAACCCCGGTCAGCTCTTCGGAAATTCCCGAAACAGTAAATGCAGTAACAACAGTCCCGCTACCACAGTATATACCAGAACCTTACCAGCAGCAAGAATTTTTTCAACAAGCCCCGCAGACAATCAGTCAAGAGTACAACAGAGAAGAGTGTCTGCGTGGGCTAAGTGCAGAATTAAAAGAATTCATTATGCAATCGGAAGAATTGCAGAACACTATAAATCCCATGTACCTTCTTGATGATATGTGTAGTAATTACGTGGAAATGGATGGTGAGGCATCAGGACCGCGACATAAACATCCAAATAATACAGTTGCGGGTGCACAATTACCACATCTACATTATCCGGTGATAAAGCGTCTCACGTTGGTGTATAACAACAAAGAGGTTGGCAGAATGTCAAAAATTATTCAAATATTCGAAGATTACACGGCTGAAAACGACAATAGAGACACCATTGTCCATGACGTCGTCAAGAATGGTGTTCAACAAGATGCGCTAATCCTCTTTAAAATCCTTGTGAACATGAAGTTATCTAATCTACTGACGCAAACAAACAATCTCGATCAGACGCCATTGCATTACGCTTGTACATTTCGTCATGCTATGTTTATAAGGCCGCTACTCGGTCTAAAATGCGATCCCAATGTTCAAGATACTAATAGCAACACAGCGCTGCACATCGCCGTAAGTGAGAATTTTAAAGATTGCGTAGAGAGTTTCGCTTCCTTCGATGAGCCCAACAAGATCAATGTAAATCTTGCAAACGACAAAGGCTTTACGCCCCTCCATTTGGCCATCCGAAACAAAAACCTCAGCATCGTTCAGATACTTTTAACTAAATTCAATGCATCTGTCAAGGTGGCGAGTTCGTGTGATGGCAACAACGCCCTACATTTGGCAGTCCAACATCAAAGCAAAGAAATCGTTAAATACCTCCTGGAGCACAGTAAAGTTGATGTGAAGGCGAAAAATCGATCTGGCCATACCGCCGAAGATCTGGCCAAAGGATTGAGCGGCAATGTTAAACAGGAAATTATTGATTTGCTATCGGAAAAAATGACTCCCTCGAATGACGATGACTCGGTGACTACAGACTCCATCAAAGACGAACCAGACGATGAGAACGACAGTGAAACTGAAGAAGACGGCGAGAAGTCAAAGTCAGAGGTCGTGATGGGCAGCGAAGAGGGACTTATGAAACGTCTCCTTCAAGACGACAAAGTGCTTAGTAATCTGGGTAGATTATTGAATATTGACAGCAAATGGAAGAAACTCGGCAGTGAACTCAACTTGGATCACTTGTTTTGTCTGTGGAGTAATGCAGAAGCAATGCTGCAACACCTTGCCGCAGTCGAAGACGTTAATCCTACGAAAATGATTAACGCCCTAAGGAAAATCGATCCAGAAGCTGCAAGTATAGCAACTGATTTGATGAAAACATGA
- Protein Sequence
- MAMHNQIYDMDKQLCFSDGSMSVPSPCSSISSSTSGYSTSNNAQTMNFSQYSMTGGDINMIVNSLPPTPPLHPNLSQLGQRMHMNPVSNDISGGYVSQLIILEQPTEKFRFRYKSEMHGTHGSLNGERSEKNKKTFPEVELINFNGTGVIRCSLYQTNLDKPSPHSHQLVVRKDDTDECDPHELTVGPDKGYIARFENMGIIHTAKKNICEALYMKKMKKLKFEMGYEKLSQSQEKTLREEAEREGKLMNLNQVRLCFEAFKVGDGNVWTRICEPVFSRPINNRKSALTGELKICRLSAVVGSAAGGEDLILLVEKVSKKNIQVRFYELRDDEVVWEAYGDFSDADVHHQYAITVRTPAYKNKDIVSNVTVHIELVRKSDDERSHSLSFRYKPRDVVMSRKRRRTSYMSSSSTPVSSSEIPETVNAVTTVPLPQYIPEPYQQQEFFQQAPQTISQEYNREECLRGLSAELKEFIMQSEELQNTINPMYLLDDMCSNYVEMDGEASGPRHKHPNNTVAGAQLPHLHYPVIKRLTLVYNNKEVGRMSKIIQIFEDYTAENDNRDTIVHDVVKNGVQQDALILFKILVNMKLSNLLTQTNNLDQTPLHYACTFRHAMFIRPLLGLKCDPNVQDTNSNTALHIAVSENFKDCVESFASFDEPNKINVNLANDKGFTPLHLAIRNKNLSIVQILLTKFNASVKVASSCDGNNALHLAVQHQSKEIVKYLLEHSKVDVKAKNRSGHTAEDLAKGLSGNVKQEIIDLLSEKMTPSNDDDSVTTDSIKDEPDDENDSETEEDGEKSKSEVVMGSEEGLMKRLLQDDKVLSNLGRLLNIDSKWKKLGSELNLDHLFCLWSNAEAMLQHLAAVEDVNPTKMINALRKIDPEAASIATDLMKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01300585;
- 90% Identity
- -
- 80% Identity
- -