Rcam000257.1
Basic Information
- Insect
- Rhingia campestris
- Gene Symbol
- dl
- Assembly
- GCA_932526435.1
- Location
- CAKOBE010000002.1:263153-269045[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9 3.2e+04 -4.5 1.8 116 134 48 66 40 72 0.41 2 2 4.5e-72 3.7e-68 229.6 0.0 1 169 77 246 77 246 0.99
Sequence Information
- Coding Sequence
- ATGTTTCAAAATAACCCACCAATCGTTGGCAGTGGCGGCGGAATGGGTGGCGCGGGAGCACAAGCCATTGATCCTACACAACAATCTACCGCTGGCTATAATGGTAATCCAATATTGCCACAACAGCAACCCCAGCAACAACAACAGCAACAACAGCAGCAGCAACAACAACAACAACAACAGTCAGCAGCAGCAGTAAATGCCAAAAATATCCGTCGTAAGGCCTTCGTTAAACTTACAGAGCAACCCGCTGGAAAGTCGCTTCGATTTCGGTATGAGTGTGAAGGCCGATCGGCTGGCTCTATACCGGGTGTCAATAGTACGCCAGAGAATAAGACATTTCCAGCAATTGAAATTGTCGGCTACAAGGGACGTTCGGTCGTTGTAGTTTCATGTGTTACAAAGGATCCACCATATAGACCACATCCTCATAATTTAGTTGGTAAAGAAGGCTGTAAGAAGGGAGTATGCACACTAGAAATTAATAGAGAAACCATGCGAGCAGTATTTAGTAATTTAGGAATACAATGTGTAAAGAAAAAGGATATCGAATCAGCTCTGCGAGCCCGAGAAGATATTCGAGTGGATCCATTCAAAACTGGATTCTCGCACAAATTTCAGCCGTCTAGCATAGATTTGAATTCGGTGCGCTTGTGCTTTCAAGTGTTTCTCCAAAACGATGTGAAAGGTACCACCATACCCCTAACACCGGTTGTCTCGGATCCCATCTACGATAAGAAAGCTATGTCCGATCTAGTTATCTGCCGTCTATGCAGTTGCTCGAGCACAGTCTATGGCGGAAAGGAGATTATCCTTCTCTGTGAGAAGGTTGCCAAAGAGGATATATCGGTCCGTTTCTTCGAGGAGCACAATGGACAATTAGTCTGGGAGGGTTTTGGTGATTTCCAGCATACAGATGTACATAAACAAACTGCCATTTCATTCAAAACACCACGCTACAGAACGATGGATATCGAGCAGCCAGCCAAGGTCTTTATTCAACTTCGACGACCATCGGACGGCGCAGTCAGTGAACCTCTGCCGTTCGACTATCTTCCATTAGAATCAGGTAGGCGTACATTCTGGGCCATCCGTAAAAATTTGAAACGGAAAGCCGACATGGGTATATTTCAGCAAATCCTCAACGAGGATAAGGCAGCTACATTGGCTGCTCAGGCAGCGATCCCCAAGTATCAGGAGGTTGGTGTCCAAAGCGATATTATCAATTTGGATACTCCAACTGATGAGGATCAAACTAAATCTTTTGGCACTGTCACCGATGATGAAGAGTCGGCCAAGCGACGCATGGAAAAGGAGGTTGACAGCATTATAGACGAAAAGATTAAGGAAATGGAATTGGAAGTGCGTGTGCCGGAACAATATCAGCATGCCAACACTCAGACTCAAGATTCCACCCCTCAAACAGAGGAGGTTGAGGAAGAATCTGCTAAAGATGACGCATTGGAACCACGACAATTGTCTACGAATGACAAAATTACCGAATGGCTCAAGTCCACCGAAGATTTCGAACGAACTACCGACAGCGGTTCTCCACCGGCTAACGAAGCAGTTACAGCATTGACCGCGTCCACGATTGTAACCTCTGAAGAGGACAAAACTTTAAATGACTTACTCGATCAGTCAGAAGAGCTGGAGGAGATCTATGTCGATAGTAAGCTTAGGCTAGAGACTTTCAACAATACGTTGGCCAATGAGCTCAGCTCTGTCGAAGGCAGCTTGACAAAAGATACACCAGCTGCTATGGAAGTCGATGAGAGTTTCGATGATGCCGCAACCTATACAAGTCTCGAAATGGCTTTTAAGAATCCCTATCCAATGGCTGACTTGATGCCACCCCTGATGGCATTGCCACCAGAACGGGCCGATCACTATGACTCCGTTGAGATTATCGTGAATCCACCAGCGCCGATCATCGATTTGGTAAACGTGCCTTCACCAAAGTCAACCAGTAGTAGTGTGGTCGGTGATGAGAACGTACCGCCACTTCCGCCGAAACGCATCCGTAAGCAGGATGGTACCGTAACTCTTCGCAACAGTCCAACATCACCGCCTCGACCTCCATCGCAGATAATCATCATGAAAACGCCCGATCAGTCGCCACCAACGAAAAGATTGCCACCTACCCCGAACAGCAACACTTTGACAAAACAAAAGAAGCCGGGTTTCTTCTCAAAACTTTTCTCACAGCGCAAGAGTAAGTCTGACTTAAGTCAGACGGGCTCGTCACCTGGATCAAAGGCGACCAGTCCGATGGGGTCCCGTGAACCCAGCATAGCACATTTCTCTCTAAACGACACTAATCGTTCGTCCATGCGATCCCTGAAATCTCTTCAGCCAACCAGTATATCGGCCACGAGCAGTCCCACGAACGGTGCAAAAGCCGGAAAATCCGGCAAACTGGTCAGTCGAAGTGTCAGCAGCGTTTCAGGCAAAAGACCTCACCTCACAGCCGATGTCATACACATCCCTCTGAAGGGTGATTCATCGAATAGTCTGCCAATGCATGAGGCATACTCCGACGCGAGCACGATTATGCTAAACAATACACTCGATCGGAAAACTGTCAGTGCCATGACACTGGTTGACATTCCAATCAATGATGGCAACATGGAACTGGTCGCCATTGCTGATCGTCAGAGTTTAAAGAATCTCTGTGAGGGTCAGTTCGGGGTCGAACTCCATCCGGACGTTGATTTAACAGAAGCCGAGCATTTCGCACTGTACACAAGTATAGCGCCACAGGCGACAGTCAGTGAATTTGACGACACGTCATGTTACTATGCGCCAGTTGATGCTGGTGAGATTTTAACACCTGAGGAGGTGGCAAAGCGACTATCCCAGGCGAATAAAATTAACTGA
- Protein Sequence
- MFQNNPPIVGSGGGMGGAGAQAIDPTQQSTAGYNGNPILPQQQPQQQQQQQQQQQQQQQQQSAAAVNAKNIRRKAFVKLTEQPAGKSLRFRYECEGRSAGSIPGVNSTPENKTFPAIEIVGYKGRSVVVVSCVTKDPPYRPHPHNLVGKEGCKKGVCTLEINRETMRAVFSNLGIQCVKKKDIESALRAREDIRVDPFKTGFSHKFQPSSIDLNSVRLCFQVFLQNDVKGTTIPLTPVVSDPIYDKKAMSDLVICRLCSCSSTVYGGKEIILLCEKVAKEDISVRFFEEHNGQLVWEGFGDFQHTDVHKQTAISFKTPRYRTMDIEQPAKVFIQLRRPSDGAVSEPLPFDYLPLESGRRTFWAIRKNLKRKADMGIFQQILNEDKAATLAAQAAIPKYQEVGVQSDIINLDTPTDEDQTKSFGTVTDDEESAKRRMEKEVDSIIDEKIKEMELEVRVPEQYQHANTQTQDSTPQTEEVEEESAKDDALEPRQLSTNDKITEWLKSTEDFERTTDSGSPPANEAVTALTASTIVTSEEDKTLNDLLDQSEELEEIYVDSKLRLETFNNTLANELSSVEGSLTKDTPAAMEVDESFDDAATYTSLEMAFKNPYPMADLMPPLMALPPERADHYDSVEIIVNPPAPIIDLVNVPSPKSTSSSVVGDENVPPLPPKRIRKQDGTVTLRNSPTSPPRPPSQIIIMKTPDQSPPTKRLPPTPNSNTLTKQKKPGFFSKLFSQRKSKSDLSQTGSSPGSKATSPMGSREPSIAHFSLNDTNRSSMRSLKSLQPTSISATSSPTNGAKAGKSGKLVSRSVSSVSGKRPHLTADVIHIPLKGDSSNSLPMHEAYSDASTIMLNNTLDRKTVSAMTLVDIPINDGNMELVAIADRQSLKNLCEGQFGVELHPDVDLTEAEHFALYTSIAPQATVSEFDDTSCYYAPVDAGEILTPEEVAKRLSQANKIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116218;
- 90% Identity
- iTF_01300584; iTF_00724536; iTF_00310778; iTF_00314917; iTF_00312358; iTF_00314036; iTF_00311573; iTF_00315708; iTF_00313216; iTF_01253311;
- 80% Identity
- -