Rmeg013382.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhimphoctona megacephalus
Gene Symbol
ttk
Assembly
GCA_963989365.1
Location
OZ022417.1:10740951-10768257[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-27 3.9e-25 89.0 0.1 1 100 136 231 136 235 0.93

Sequence Information

Coding Sequence
ATGCTCTGTAGCCTAAATCCTATTGTGGATCATGAGCTACCGTTCGGTGAAAGATTCATTGAAATCAGTTTAGTTGCTTCggttaaaaatttgaaattctttATTGTTTTAGTCTCAGAACAAACTGACGAGAAGGAAAAGGAGGAAGAGAcgggggaggaggaggaggacaaCAACGGTCGAGAGGACAAggtggaaaaggaaagaagGGTCTCAAACGAGTCAAAGTACGAGAAAAGTGACGAAGtggtggtggcggtggtggGAGGCTCGCGTGTGCTACGAGAGCAACGTGTCGTTTCAGGATCGACAACAACGGGAGCCCAAACACCGACCATGTCGAACGTGTTTCCACAACAGTACTGCCTGAGATGGAAGTATCATCACAGCAATCTTCAGACAATGTTCTCGCAGCTGCTCGAACGTCAAGCTTACTGCGATGTCACCCTCGCCTGTGAAGGTCAAACGCTTCGGGCACACAAGGTCGTGCTCTCAGCTTGTAGCACGTATTTCGACACTATACTCTCGCAGTACGAGGAAAAGGATCCGATCGTAATAATGCGAGACGTCAAATTCTCAGACATCAAAGTACTCGTCGAATTTATGTACAAGGGAGAGATCAACATCGATCACACAAGACTGTCGTCGTTATTAAAGACTGCGGAGGATTTGCACATCAAGGGATTAGCGGAAGTGAGCTGGCGGAGTGATTCCGTACAGAACGATATTAACAACAGTGGCCACAGTCCGGGAGCGGGGACTCCCGGTGTCGAGACCGTTTTGAGAGAAGGAGATGTCGACGAGCCTCCACCACCCAAACAACGACGCAGAGGTCGTCCGCCTCTCGACGATCCACCCTCCGCTCACGATGTATTTACACCCAAAATCACTTGCTTCACCGGAAACgaGGAGATGATGAGTGAGGGTGATCACGAAAGCTGCGACGACGAAATGGCTAATGAAAATAACGAACCTCCCATACCTATGctttCCTACTTGTCCAAAGACGACAGTACCTCTGACCAGGAAAAGAAATCGTCGAATACACCATCAAATTCAAACGCGACGAATCCAGCGATACCTGAACAATTTCGAGACGTAATCAAGATGAACGATTATTTGACGACGGGACGACGCCAAGAATTTTGGGAAGAACCGTTCACGCGACGCGTCATGGACGCCATTAAAAGCAAGGAACTTGAGATGAAGACTGCTGCCGAAATACTCGGCGTTTCGTACGGGACTCTTTACGGAAGATATCGTGACAGTTATGGTTGCCTTAAACACCCCTACAGAGTAAGGGATTTTTGGTCCGAGCCTGGACCGGCGGAAGTTCTAGCGAAGCTAAGAAGAAAGGAGATTACGTTATTTCGAGCAGCGGAATTTTTGAACGTAACGGTACACACACTCGCGACTTATCTCTCGACGCTTCAGGGTCCGGACAGGATATCGCTAGCGGGTGAATTAAGCGCAGCGACGAGTGCAATGGAAGTGAACAACGATATGGATAATAACGAGGCGGTGAACGAAATATTACAAAAGTTCAGCGCGAATGCGTCGATGACGACGACGCCAACGACATCGGCAACGATAAAACGGGAGGGCGGTGGTTACCTCGAGTTACCGGGTATCGTAACGAAAGGAGCGACGTCGGTGTTGGAAAATAATCCTGATATAACGATCGTTAAGACCGAATGtttgcaacaacaacaacagcaacaacaacagagAAAACGGGAATACGCAAAGGTCTCGAACACGGAAAACAACAATGCTAAATTAATGAGCGGCGGTGCGGTTACTGAGATCGCACAACAACAAAAACTTTCCGACACGTTGTCCCTAAACAACGACAATAGTAAACCCTAA
Protein Sequence
MLCSLNPIVDHELPFGERFIEISLVASVKNLKFFIVLVSEQTDEKEKEEETGEEEEDNNGREDKVEKERRVSNESKYEKSDEVVVAVVGGSRVLREQRVVSGSTTTGAQTPTMSNVFPQQYCLRWKYHHSNLQTMFSQLLERQAYCDVTLACEGQTLRAHKVVLSACSTYFDTILSQYEEKDPIVIMRDVKFSDIKVLVEFMYKGEINIDHTRLSSLLKTAEDLHIKGLAEVSWRSDSVQNDINNSGHSPGAGTPGVETVLREGDVDEPPPPKQRRRGRPPLDDPPSAHDVFTPKITCFTGNEEMMSEGDHESCDDEMANENNEPPIPMLSYLSKDDSTSDQEKKSSNTPSNSNATNPAIPEQFRDVIKMNDYLTTGRRQEFWEEPFTRRVMDAIKSKELEMKTAAEILGVSYGTLYGRYRDSYGCLKHPYRVRDFWSEPGPAEVLAKLRRKEITLFRAAEFLNVTVHTLATYLSTLQGPDRISLAGELSAATSAMEVNNDMDNNEAVNEILQKFSANASMTTTPTTSATIKREGGGYLELPGIVTKGATSVLENNPDITIVKTECLQQQQQQQQQRKREYAKVSNTENNNAKLMSGGAVTEIAQQQKLSDTLSLNNDNSKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00629218;
90% Identity
iTF_00263619; iTF_01057763; iTF_00262767; iTF_00265846; iTF_00266576; iTF_00439608; iTF_00828894; iTF_01508985; iTF_01103675; iTF_01102928; iTF_01101492; iTF_01102212; iTF_01100758; iTF_00829632;
80% Identity
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