Basic Information

Insect: Rhimphoctona megacephalus
Gene Symbol: Hr39
Assembly: GCA_963989365.1
Location: OZ022422.1:5204173-5215242[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.064 6.7e+02 0.2 5.0 45 165 205 324 172 335 0.69

2 4 3 3.1e+04 -8.7 14.5 70 142 355 429 331 466 0.63

3 4 5.5e-08 0.00058 20.2 0.0 1 21 537 557 537 562 0.92

4 4 7e-71 7.3e-67 227.4 0.0 180 408 679 920 569 920 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.064	6.7e+02	0.2	5.0	45	165	205	324	172	335	0.69
2	4	3	3.1e+04	-8.7	14.5	70	142	355	429	331	466	0.63
3	4	5.5e-08	0.00058	20.2	0.0	1	21	537	557	537	562	0.92
4	4	7e-71	7.3e-67	227.4	0.0	180	408	679	920	569	920	0.81

Sequence Information

Coding Sequence: ATGTCAGAACAAAACGGGCCCACGGAGGGCCCGGGCTGGTGGCCACCCTCGCAGTCCTGGAAATCAACCAGCAAcgcgtcatcgtcgtcgtcgtcatcgatTCCATCCTCCCGTACGCTCGAGGCCGGAAAAAATGTTTCTGTCACGACGATCAATGTACCACCGGCCCAGGAAATGCACGACGgTAAAAGCGTGTGCAAATATCTGGGAGGGCAAAATGGCGTGACGGTATCGGTGGTCTCGAATTGCGGAAGTGGTCCAGGCAGCGGTATGGGGACAGGACCCGGAGGAGGGAGTGGAGGTGCATCTTCTTCGTGTCCAGAATCAAGTTGCCTCGAGGATCTTGAGGACAGCGACGGTGAAGTTAGTAAAATCGATTTTCGGGGCGTTAATCTACGAACGAAGAAGAAACGAGACGCCTCAGGTGGATCGGAGAACGAATGCGGCGCCGTGGGCGCCGACAATCTCGAACAACAACAGCCTGAGAGACCAATGTCATGGGAGGGCGAATTATCCGATCAAGAAATGTCTTCCAACACTATTACTAATCagGATCACGAGGAAACGTCAATGGAAGGGGTCCAAGTATGTGGAGCGAGTCCAGGGCCACAGGAGCAAAAATTTCCGATAAAACCAGAGCCTGATTTTCGTTCGAGTCCGAGTTTGTTGATAGGTTCACACAACGACGGGAGTTTGGGGTTGTCGCACGTTCAGCAAatgcaacagcagcaacaacagcgaGGTATCGATGATTTGGAGTCGACGCAACAGAGCGATCTTCCGTTGTTGGTTGGAAAGCTTTTGGGTGGTTACAGCAGTTCGACGCCGAATCACAGTCCGATATTGAATCCGCGTCATCACTTAACGAAGCACAGTCATACGAGGTCGCAGGTGCCATCGCCAGATTCGGCGATTCATTCAGCGTACAGCGTGTTCAGTTCACCGACCCAGAGTCCGCACGCGGCTCGTCATTCGGCCCTGGGACCTGGCAGTCCGGTGCCATCGTCGTCATTGTCGCGTCACAGTTTCAACAATTCAACCTCTTCGTTATCGCTCTCGTTGTCGCATTCATTGTCCCGTAACAATTCGGATGCTTCGAGCAGTTGTTACAGTTACGGCTCGTTGAGTCCGCCTACGCATTCGCCGATCCAACAGCCAAGACATTCGCACGCGCaacatcatcaccatcatcatcaccaACAACAGCAACATCAACAGCAATTATCACAAGCTGGTAGCCCCCTGCATTTAGCTTCATCAACAGCCACCAATCCGCATAATTACGGACATCAAAGTTCAGAAATATCCTCCGAAGGCGGTCATCCCGAGGATCAGGAAGACTGTAAAATTCCAACTGCCACTTCGGGCATCTCAACGAGGCAGCAATTGATCAACAGCCCATGTCCGATTTGCGGCGACAAAATAAGTGGCTTTCATTACGGTATATTCTCGTGCGAATCTTGTAAAGGCTTTTTCAAACGGACCGTCCAAAATcggaaaaattatgtttgtcTCCGAGGCGCTGGTTGCCCCGTTACCGTCGCAACCAGGAAAAAATGTCCTGCTTGCCGTTTTGACAAATGTCTCAATATGGGCATGAAACTGGAAGCTATCAGAGAGGACAGAACGCGCGGTGGTAGAAGCACTTATCAATGCACTTATACACTCCCGGCTAATTTGATCGGGAGCTCCGGTGGCGGCATGTCCAATGATAAAATGACCGGTGGAAATTGCAGTCCGGCTCCACCCGGCTCCGAACATCATCATTCGGCGAGGCATCATTGGAATCATTCCCACAAAATCCAAGTCGTGCCGCAATTGTTGCAAGACATTATGGACGTCGAACATTTGTGGCACTACAACGACAACGATCGCGTCACCGGCGGCAGTCAAAGTGGCAACGTCCCCGGCGGTGGCAATGGCTCACCGATGCCCAACGACATCCCTGGACTCGGCGTTAGCGGCCTCGGCTCCGGTGCTGGCACCGGAAGCCTCAACACCCCAAGCAACAACGGCAACGTTGACAATCGCTGCGAAGCTACGAGATCCAACAATTCACCGTCCAGCCTCAACAACGAACAGCATCAACAACAAAATTCAACCTCCAACAATCCAACCAACGGCAGCAACAATCCAACCCCAAATCCCAATGGAAATACCACACAAAATCCTGACTTTTTATCGAATCTCTGCAACATCGCCGATCATCGACTATACAAAATTGTCAAATGGTGCAAAAGTTTGCCactcttcaaaaatatctctatagACGATCAGATTTGCTTATTGATCAATTCCTGGTGCGAATTGCTCCTGTTCTCATGCTGCTTTCGCAGTATGAGCACACCCGGCGAAATTAGAGTCTCACTTGGCAAATCTATCACTCTCGAACAAGCTAGACAACTTGGGCTTGCAACGTGTATCGAAAGGATGCTCGCTTTTACTAATAATCTGAGGAGGCTCAGGGTCGATCAATACGAATACGTCGCGATGAAGGTTATAGTTTTGCTAACATCGGACACGAGCGAGCTTAAGGAGCCCGAGAAAGTGAGAGCTTCACAGGAGAAAGCTCTGCAAGCTCTGCAGCAGTACACGGTTACGAGGTATCCAGAAATGCCAGCGAAATTCGGTGAGCTATTGCTTCGAATACCGGATCTCCAGAGAACTTGTCAAGCTGGCAAAGAATTGCTGAGTGCCAAACGGGCCGAGGGAGAAGGCAGTTCTTTCAATTTGTTGATGGAATTGCTGAGAGGAGATCACTGA
Protein Sequence: MSEQNGPTEGPGWWPPSQSWKSTSNASSSSSSSIPSSRTLEAGKNVSVTTINVPPAQEMHDGKSVCKYLGGQNGVTVSVVSNCGSGPGSGMGTGPGGGSGGASSSCPESSCLEDLEDSDGEVSKIDFRGVNLRTKKKRDASGGSENECGAVGADNLEQQQPERPMSWEGELSDQEMSSNTITNQDHEETSMEGVQVCGASPGPQEQKFPIKPEPDFRSSPSLLIGSHNDGSLGLSHVQQMQQQQQQRGIDDLESTQQSDLPLLVGKLLGGYSSSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGPGSPVPSSSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPIQQPRHSHAQHHHHHHHQQQQHQQQLSQAGSPLHLASSTATNPHNYGHQSSEISSEGGHPEDQEDCKIPTATSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSSGGGMSNDKMTGGNCSPAPPGSEHHHSARHHWNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVTGGSQSGNVPGGGNGSPMPNDIPGLGVSGLGSGAGTGSLNTPSNNGNVDNRCEATRSNNSPSSLNNEQHQQQNSTSNNPTNGSNNPTPNPNGNTTQNPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTVTRYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00059522;
90% Identity: iTF_00266535;
80% Identity: iTF_01299212;