Rneb036672.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- pnr
- Assembly
- GCA_948150685.1
- Location
- OX411310.1:40845814-40866805[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-18 1.5e-14 54.7 3.2 1 34 87 119 87 121 0.97 2 2 1.4e-18 9.5e-15 55.3 5.7 1 35 146 179 146 180 0.98
Sequence Information
- Coding Sequence
- ATGTTTCCTGGTACGAACACAATGGCCTCCACAAGCTACATGGACACAACTGGTCACAACATGTACGGAGGAGGCGGAGGTGGCGGGCCAGTGTACGTCCCTCCTCGGGGTTGGCAGGACTACCAAGGACACCAGCACCAGCACCAGCTGTCAGCGCCCGCCAACACCTTCTACCCTGCCGTCATGTGGAGGTCCTACGACCACCACTATCGCTATCACTATGATTCGAGCGGGATGGAGATGGGCGAAGGAAGAGAGTGCGTCAACTGCGGTGCGATCAGCACGCCGCTCTGGCGCCGGGACGGTACGGGCCACTACCTTTGCAACGCCTGCGGCCTCTACCACAAGATGAACGGCATGAACAGGCCCCTTGTAAAACCGGTCAAGAGGCTAGTCAGTACTCACACTACAGCCACCCGCAGGCTTGGTTTGTGCTGCACAAACTGCGGTACTGGCACTACCACACTATGGCGGCGAAACAATGAAGGAGAGCCAGTATGCAACGCTTGTGGTCTCTATTTCAAATTACATGGTGTCAACCGGCCTCAGAATATGAGAAAAGACGGGATTCAAACCAGAAAACGGAAACCTAAGAAATCAGCACAAGAGAGTACTTCTTCAAACAGTCAAGCTACCTCTCATGCAGATTCAAGTAAGCTATTAAGCAGTGGAACAAATGAAAGACCATATCTCGGACATACATCACTACTGGTTGGAGGAAGCAGTATAAAATCAGAACCTGGGCCAACACATTATGGCGATCACCTGACTGAGCATTATTACCACAACCAACAAATGTATAACATGCAACACACTGATTACTTGGGAAATAAAATAATGGCTTCAACATAG
- Protein Sequence
- MFPGTNTMASTSYMDTTGHNMYGGGGGGGPVYVPPRGWQDYQGHQHQHQLSAPANTFYPAVMWRSYDHHYRYHYDSSGMEMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPVKRLVSTHTTATRRLGLCCTNCGTGTTTLWRRNNEGEPVCNACGLYFKLHGVNRPQNMRKDGIQTRKRKPKKSAQESTSSNSQATSHADSSKLLSSGTNERPYLGHTSLLVGGSSIKSEPGPTHYGDHLTEHYYHNQQMYNMQHTDYLGNKIMAST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00764343;
- 90% Identity
- iTF_00715487;
- 80% Identity
- -