Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 8.1e-09 0.00051 22.3 0.3 1 17 67 83 67 88 0.89

2 2 3.3e-19 2.1e-14 55.5 5.7 1 35 113 146 113 147 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	8.1e-09	0.00051	22.3	0.3	1	17	67	83	67	88	0.89
2	2	3.3e-19	2.1e-14	55.5	5.7	1	35	113	146	113	147	0.98

Coding Sequence: ATGTACGGAGGAGGCGGAGGTGGCGGTCCGGTGTACGTCCCACCCCGGGGATGGCAGGACTACCAAGGCCACCAGCACCAGCACCAGCTCCCAGCGCCCGCCAACACCTTCTACCCTGCCGTCATGTGGCGCTCCTATGACCATCACTACCGTTCGCACTATGattcgAGCGGGATGGAGATGGGTGAGGGACGGGAGTGCGTGAACTGCGGAGCGATCAGCACTCCGCTGTGGCGGCGGGACGATGAACGGCATGAACAGAACAGGCCCCTTGTAAAACCGGTCAAGAGGCTAGTCAGTACTCACACTacAGCTACACGTAGGCTTGGTTTATGCTGCACAAACTGCGGCACTGGTACTACCACACTATGGAGGAGAAACAACGAAGGAGAGCCAGTATGTAACGCATGTGGACTCTACTTCAAATTACATGGTGTCAATCGGCCACAAAATATGAGAAAAGATGGGATCCAAACCAGAAAACGAAAACCTAAGAAGTCAGCACAAGAGAGCTCTTCTTCAAACAGTCAAGCAACTTCTCATTCTGattCAAGTAAGCTCTTAAGCAGCGGAACGAATGAAAGACCATATCTCGGACATACATCACTACTGGTAGGAGGAAGCAGCATAAAATCTGAGCCAGGGCCAGCACATTACGGTGATCACCTAACAGAGCACTATTACCACAATCAACAAATGTATAACATGCAACACACACCGATTATTTGGGAAACAAAATAA
Protein Sequence: MYGGGGGGGPVYVPPRGWQDYQGHQHQHQLPAPANTFYPAVMWRSYDHHYRSHYDSSGMEMGEGRECVNCGAISTPLWRRDDERHEQNRPLVKPVKRLVSTHTTATRRLGLCCTNCGTGTTTLWRRNNEGEPVCNACGLYFKLHGVNRPQNMRKDGIQTRKRKPKKSAQESSSSNSQATSHSDSSKLLSSGTNERPYLGHTSLLVGGSSIKSEPGPAHYGDHLTEHYYHNQQMYNMQHTPIIWETK*

Sequence clustering based on sequence similarity using MMseqs2