Rneb002571.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- dmd-4
- Assembly
- GCA_948150685.1
- Location
- OX411308.1:67344073-67354113[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-26 2.3e-22 80.0 9.4 1 47 8 54 8 54 0.99 2 2 0.62 9.9e+03 -2.1 0.8 4 9 228 233 225 235 0.57
Sequence Information
- Coding Sequence
- ATGAGTAGCGAGGGTCCAGGGAGACGCCCCAAATGTGCTCGATGTAGAAACCACGGTATTATCAGTTGGCTCAAAGGGCACAAGAAAGATTGTCCATATGCGACATGTTCATGTGCCAAGTGTGGTCTCATCGCAGAGAGGCAGCGAGTCATGGCGAAACAGGTGGCACTAAAGAGACAACAAGCAGCAGAAGACAGCTTGGCCATCGGAGTCACAGAAGCAGTAACTGGCAAGAAGTTCTGCTACCTTCCTCCTGGTCCGATACTATCCACTCTACCCCAGCCTAAACAAGAGACGATGGTCAGAGAAGAAGAGCGTTCTGTAAATCGTAAATCCAGCATCGATATGCTTATGAAGTTGTTTCCGGACAGAAAGAGATCGGTCCTGGAACTGGTGTTCAACAGGTGTGACGAACAGCTCATGCAGGCCATAGAGCTTTGTCTATCGTCATTTAAAGAAGTGGAACGTCATCCGGTTGGAAGCGCAGAATTTTCAGCATTTTCTCCACCTGTTGCTCACCAGTCTTCTAAGCAGCTTTCACCCCCTAACCCAACTAACTACGTCAAACACTACCCTTGTGTACCTCCGTTGCAGATGCCGTTTCCAGGCTACCCATTCTACCCGCCTGGTTTCCAGTTCAGTTCTTTGCTCATGCCGCCACCTCCTTACGATCATTATGAACATTGTGAACAGTGCAATAAAAAAGAATAA
- Protein Sequence
- MSSEGPGRRPKCARCRNHGIISWLKGHKKDCPYATCSCAKCGLIAERQRVMAKQVALKRQQAAEDSLAIGVTEAVTGKKFCYLPPGPILSTLPQPKQETMVREEERSVNRKSSIDMLMKLFPDRKRSVLELVFNRCDEQLMQAIELCLSSFKEVERHPVGSAEFSAFSPPVAHQSSKQLSPPNPTNYVKHYPCVPPLQMPFPGYPFYPPGFQFSSLLMPPPPYDHYEHCEQCNKKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00763876;
- 90% Identity
- iTF_00763876;
- 80% Identity
- -