Rneb022795.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- lilli
- Assembly
- GCA_948150685.1
- Location
- OX411307.1:63274933-63317545[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 2.9e-07 0.014 16.1 0.0 43 93 113 164 107 195 0.75 2 7 9.3e-08 0.0045 17.7 0.7 324 381 237 291 218 295 0.83 3 7 1.3e-07 0.0063 17.2 10.4 414 514 356 469 327 469 0.58 4 7 0.23 1.1e+04 -3.4 2.9 418 456 512 550 487 603 0.53 5 7 1 4.8e+04 -7.1 25.2 81 249 592 756 573 769 0.42 6 7 1 4.8e+04 -5.8 28.1 125 250 875 999 809 1022 0.39 7 7 0.63 3e+04 -4.8 15.2 77 159 959 1037 942 1206 0.57
Sequence Information
- Coding Sequence
- ATGCTGAACATGTTGACGGTTAGACCAGGACGTAGTTGGGAGTATAAAATGAAGTCCGATCTTATCAGTGAATGTTTCGTGCCCTTTGATGACATATCCCTTCAAGTCGTAGATTATCCTCTCCTTTTGGTTCAACTTGTTGTGCCCTATTGTACAGGGCTAATATTATGCGGCGTGGGTGACAAGAAACTATCTGCTGATAGTGGGAAAGTTCTAGGAGCGGATGTTAGAGAGGATGTGGTGGACCCAGTGGGTGTGATTATTCATTATTATGCCCTGTTCAAGCTGATAGCCTCAACAGTGGACAGTTTAAAATACTTCGTGAGTCCTTCGCCAGGAGATAGGGTCAAACAAAATATACAGAGTACATTGGGCGAGTATGACAAGGTGAAGCATTTACTCGAAGAACCGAAGCAGCTACTCGGCTTCGATGGCATACCAGCTTCGCCTGCCCCCGTTCAACCACCTCCGACTACAAGGACCCATGAGTTCAAGAAACCCCCCTATCATCCTGCTCCCAATCGCCCGCCTTACAGGTCGGGGAATATCAAGACTAACGATGTCAAGCCGGGCTACAGTTGTGGGAGAGGCTTCTACCCTGGCCAGCCGGTGAAGCATGGGGCCGAGCAGAGGGCCAACGGGGTTGTCAACACATCCAAGGGTCCGCCGATCCATCCCCATCAGAGGCCTATCAGCAGAAATCTACAACACCGCCCACATCTCCCAGATCTCATGATGCATAAAGATATGAATCGTTCTTCAAACTCGACCGACGTGGAGCATATACTGAAGGAGATGACCGAGGTCATGGCACCTTTGACAGCGATAGCTTCGACCCCAAGGAAAGAAGTGGAGTCCAAGTTTAGCTTTGCTCCTGACTTTTATGGACAGTTTCCTGAACCTTTGGAGATGCGATCATCAGCTTTACTTTCCCCACCGAAACCAGAGTCGCCTCCACCGCTCCCGCTATCTCCACCTCCAGCCACACCCTGCCCCCAAAAGCAATATAAGCCTCTGACAGAGCTTAGTAGACATGGGTCTGTCCAGCCAGCATTTCCTTCAGGTGACCTTGTTCATGACCTAAGTTTATCTGAGGATAGTGATGAAGAAACAAAGGTTCCTGAAACTCCAAAAATCACTCCTGTTGAAGTTCAGCCTACTAGAATTGTGGATCTTACACAATCACCTATCCCTAAAATTACATTAACATCACCTGCAGTGAGCATTGTTCCTGAACCAGTGAGACCAATGTCAGTTTCACCTGATGGAAGTTCTTCCAGTAGTGATTCTGGATCAGATAGCTCAGAAAGTGATTCCAGTACGTCAACACCTGTTCCGCAAGAACTTCCTAACCCAGTTCTTCCAGAGCCGCCTAGACAAAGTTGGGAATTGAAATCTTTTTTGCAGCCTCCTGCCAATCCAGAAAGAAAACTTACTCCGGAACCTCCACCACCAGTCGTGAAACCATCTAAAATTGAAGATGATTCTGAACTTGAATTGGGTGATGATGTATTATCCAAACCATTGCTATCAAGTTTATCAGACAGCGATGCTGAAAAGAAGGGAAAGCAAAAGACTGTTGGCCGCCCAAAACGTAGAAAAAAACCAGTTAAAAGCCTTCCAGTTCAAACTGACAGTGAAGAAGAAAATGAGATAGTACAGCCTATAATACCATCTCCTCGTACTACTAGAATTTCAAATAAAACACCCTCAGGAAGTGAAGGTGAGGTAAAAGGTAATGCGAAAAGAGAAAAACCATTTAGAAAGCGTCAGCCTTCTACTCCATCACGGAAACCATCCTCAGAACGAGCAAGGAAGAGAACACCTGCAGTACCTAATACTAACTCTAATTCTAAAACTCCTGAATCTGAATCATTATCAAGAAGAGGTAGAAAAAGAAACATAAAAACTCCAGTAACATCTAGCAACACTGATGATGATTCTAAAAGGAAACGTATCCCTAGCAATTCAGAATCTGATGATGAATCATGGTCTGTTCATTCTACTATTTCCAGGAAAAGGAGTAGCAGGCGTTCTGCAAAAGAGAGTTCCAGTGAGAGAACTAAGAGAGAAACAGGGTGGAACAAATTATCAAGCAGTGATGAAGAAACAAATAATATAGTTTCTTCTCCTCTAAAACCTATTTCAAGAGTGCCTCCTGCTCCTGGAAAAAGGCTCCCTAAAGGATCAAGTGAAAGTGATGCTGAGAAAGAAGAAAGTCCACCAAAATTAGATTCAGACGGGCAAACTATCCAAGACAAAAAGAAAAATGATACACTAAGAAAACTTTTCTCGAAAAGGGACAATGAGGGTGGTGGTGGAAAGGGAGGTGGTAAAGGAGGTGGCAAAGGTGGTGGCAAAGGTGGAGGAAAGTCAGGTGCAAAAGGAGGTAAATCTGGTATTTCAGTTATTGAGTGTGAACCTGAACGAACTTCTCATGTAAATAAAGTAGAGATGACTCCCCCAGTTGTATCTCAACCTCCCCAGAATTCAAGGATACAAGAAGTATTTGTTGCTGAGGAAATAAAGGCAAAAGGTGTTGTTATTCCACCCGTGACTTATGTAAATGGAAAACCATCGATAATGTGTAGCTTAGATTTATCAAGGCTGCCCCATTTACCTAGTAAGCGTAGGTCAGAAGAAATTAGAACTAGAACAGAGTTATCAGATACCAGGCAAAGTAAAACAAAGAAAACTGAGTCTGATTCAAAGTCAGAAAAACGGGAACGTAAATCTTCAGAGAAACATCGTTCAAGAGATGATAAATTGAAAAAAAGAAAGAAGTCCCCATCAGCCGAAGTTAAAGAAGAGCCACAAAAGCCCAATAATTTAGAAGTTATTAAACGTTTAACACCAGAAGTAACTGTAGAACCAGAAAATGCTTCTACAAGTGCTAATAACACCAAAAAGGATCGGAGATCAAGTACAAGCTCAACTACATCTTCACATGCTGGAAATTTACATCATTCTAGCTTACATCAAAGTGTTAAACGGAAGAAACATAGTGAACGCCATGGTTCCAAAAATGAAGGAACACTTGTTGATGCTCCACCTACTAATCATGAACGGGAAAGAAGAGATCATGAAAAGGATAAGGACAAAGAAAAAAGAAAAAATTTGCAGTATTTTTCATACTTCGAAAGGCCTGAGGAAACAGAATTATGTGATACAGACGATAAAGATCAGTTTTTATCTGAAGCCAAGAGATTAAAAAATGGTGCAGACAGAGAACAAGACGAGTCGGCTCAAGGGATGCAGTACCTTGAAGCAGTTATGTATTTCCTATTAACAGGAAATACCATGGAACTGGAAAGTGAGACAGAGAAATCTGCTCACACAATGTATAAAGATACATTGAAGTTGATCATGGACATTGCTTCAAAATTCAGAAGTCACCAAACACAATCTAGTATACACAGTAAATTAGCAGTATTGAGCTTGCGTTGTCAGTCTCTTCTCCACCTGAAACTGTTTAAAATGAAGAAAGCTGAAGTTAATGAAGTTATAAAAATTGTTTCTGATCACATGCAAAAGGCTATTCCTACAACACTGGAGCAATGCAGTACTTCAGTTGTTCAAGGGCAAGGTACACCTTCACCATTGTCACCAACTCCTTCACCAGCTGGTAGTGTAGGATCTGTTGGTTCTCAATCTTCAGGATATAACAGTGGTGAACGGGGTGGCACCATACCTCAAGTAACCCCACATATGCCTGTAGCACCAACTGGACAAATTGTTGCTCTGCCTCTTCATGTTCATAATGCTTTTCAAAAGGAGCATGTCCATTTCAATTCTCTTGTTGCGTCTCATGATCTCTGGGATCAAGCCGATGCTCTTGTGCATAAAGGAAAACATAAAGATTTTTTTATTGATTTGGACAGAAGTTGTGGACCACTAACTCTTCACAGTTCTTTGAAAGATCTTGTACGTTATGTGCAGTATGGAATAAGTCGTTTGAAGGAACTCCGGAATGACTCAACATGA
- Protein Sequence
- MLNMLTVRPGRSWEYKMKSDLISECFVPFDDISLQVVDYPLLLVQLVVPYCTGLILCGVGDKKLSADSGKVLGADVREDVVDPVGVIIHYYALFKLIASTVDSLKYFVSPSPGDRVKQNIQSTLGEYDKVKHLLEEPKQLLGFDGIPASPAPVQPPPTTRTHEFKKPPYHPAPNRPPYRSGNIKTNDVKPGYSCGRGFYPGQPVKHGAEQRANGVVNTSKGPPIHPHQRPISRNLQHRPHLPDLMMHKDMNRSSNSTDVEHILKEMTEVMAPLTAIASTPRKEVESKFSFAPDFYGQFPEPLEMRSSALLSPPKPESPPPLPLSPPPATPCPQKQYKPLTELSRHGSVQPAFPSGDLVHDLSLSEDSDEETKVPETPKITPVEVQPTRIVDLTQSPIPKITLTSPAVSIVPEPVRPMSVSPDGSSSSSDSGSDSSESDSSTSTPVPQELPNPVLPEPPRQSWELKSFLQPPANPERKLTPEPPPPVVKPSKIEDDSELELGDDVLSKPLLSSLSDSDAEKKGKQKTVGRPKRRKKPVKSLPVQTDSEEENEIVQPIIPSPRTTRISNKTPSGSEGEVKGNAKREKPFRKRQPSTPSRKPSSERARKRTPAVPNTNSNSKTPESESLSRRGRKRNIKTPVTSSNTDDDSKRKRIPSNSESDDESWSVHSTISRKRSSRRSAKESSSERTKRETGWNKLSSSDEETNNIVSSPLKPISRVPPAPGKRLPKGSSESDAEKEESPPKLDSDGQTIQDKKKNDTLRKLFSKRDNEGGGGKGGGKGGGKGGGKGGGKSGAKGGKSGISVIECEPERTSHVNKVEMTPPVVSQPPQNSRIQEVFVAEEIKAKGVVIPPVTYVNGKPSIMCSLDLSRLPHLPSKRRSEEIRTRTELSDTRQSKTKKTESDSKSEKRERKSSEKHRSRDDKLKKRKKSPSAEVKEEPQKPNNLEVIKRLTPEVTVEPENASTSANNTKKDRRSSTSSTTSSHAGNLHHSSLHQSVKRKKHSERHGSKNEGTLVDAPPTNHERERRDHEKDKDKEKRKNLQYFSYFERPEETELCDTDDKDQFLSEAKRLKNGADREQDESAQGMQYLEAVMYFLLTGNTMELESETEKSAHTMYKDTLKLIMDIASKFRSHQTQSSIHSKLAVLSLRCQSLLHLKLFKMKKAEVNEVIKIVSDHMQKAIPTTLEQCSTSVVQGQGTPSPLSPTPSPAGSVGSVGSQSSGYNSGERGGTIPQVTPHMPVAPTGQIVALPLHVHNAFQKEHVHFNSLVASHDLWDQADALVHKGKHKDFFIDLDRSCGPLTLHSSLKDLVRYVQYGISRLKELRNDST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165239;
- 90% Identity
- iTF_00763849;
- 80% Identity
- -