Basic Information

Insect: Rhaphigaster nebulosa
Gene Symbol: ct
Assembly: GCA_948150685.1
Location: OX411307.1:138110469-138126574[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.9e-27 3e-23 83.0 0.0 3 72 292 362 290 367 0.95

2 3 2.5e-31 4e-27 95.4 0.1 3 77 646 721 644 723 0.96

3 3 1.8e-31 2.8e-27 95.9 0.1 3 76 831 905 829 908 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.9e-27	3e-23	83.0	0.0	3	72	292	362	290	367	0.95
2	3	2.5e-31	4e-27	95.4	0.1	3	77	646	721	644	723	0.96
3	3	1.8e-31	2.8e-27	95.9	0.1	3	76	831	905	829	908	0.96

Sequence Information

Coding Sequence: ATGTCTGGAAGAACTCCGGAGGACAACTGTATTAAGATGGCCCTACGCGACCGGTTTTCTCATCAATTCGAACCGTCGATATCCCAACTTCTGGATGATGTTCAGCGGCTCCAAAGCCGAATAGGAAAACTGCAAGAAAATTCAGCAAACCAGATTGCAAGGTTAGAAGAAGAGCTTGAGCATAAGCGTCAACATATTTGTAGGTTAGAAGCCCGCCTAGATGCTCAGAAAGACTATAATGAACTGAAGAGGCAATTGAGTTGTTTTAGAAATGCTGAAGAAGGAGCCAAAGTAATTGAACATGAATCAAACAAAATTTCTGAGGTATCAATAAAGCCCCCTCCAGTTACTACACCTTCTGAAACACAAGGTGAAGTGCCTACATTACACAATGTTGAAACATTTGGTTCATTCTTAGGAGAAGAAATTGTAGCCAACTGGCGTAGATCCTTGGAAAGGTCAATAGTTGGTCCACCTGGCAATTGGGCTAGTCCACCAGAAGAAGGTAAACCAAAGATTGAAGAAACAAGGGAAAGAGAATTAGATAAAACTGGATCACCAAATAGAGAACTTGTCAATGGCTCTGCCAGTCCTAATGGTCATGAGCAAGAGCATGTAAATTCAGTACTCCCTAATGGAATGTGTGCCCTAAATATTGGCATCAACAATAATGTTTTAAACTCTGGCCCATCATTAAATCTCAGTGATGTTATGAAAAGTCCATTCAGGTTTGACGATCGTTCACCATTTAGGTTCAACGAAGATCCAAGCTGTATGGTTGGACGTTTTGGCGAATCATTGATACCTAAAGGAGACCCAATGGAAGCAAGATTACAAGAAATGCTTAGGTATAATATGGATAAATATGCCAATCAAAATCTCGATACTCTACATATTGCCAGGAGAGTGAGGGAACTTCTTTCTATCCATAATGTTGGGCAAAGGCTTTTTGCTAAATATGTTCTTGGTTTATCCCAGGGCACTGTTTCTGAGCTTTTGTCCAAACCTAAACCATGGGATAAGTTGACTGAAAAAGGTCGGGACTCTTATCGTAAAATGCATGCTTGGGCTTGTGATGACAATGCTGTCCTACTTCTGAAATCTCTCATTCCTAAAAAAGGTAAGGATGGAGCCAGCATGGGAGTAATGTCTAGAGGTTCAGAAAATGACATAACTGAAGAAAGAATTGCACATATTCTCAGTGAGGCAAGCCACATGATGAAGCCACAACAACATGATGAAACTCATAGTAACGAAGACAGCAAATCTCCAAACCATCCACAGAGTTCAGAATCCCCACTTGGTAGAGACAATTCACAAACACGTAGACTAAAGAAATATGAAAATGATGACATTCCTCAAGAACAAGTAGTTAGGATATACCAAGAAGAGCTTGCAAAGATAATGGGAAGGAGGCTTGAAGATCAGAACTTCCCTGGTTTGGTGTTTCCTCATTTTCTGAGTGGTGGAAGTGGTGAAGATGTTCGGATTGCAATGGATGCCTACCATCGAGAACTTGCCAAGCTGAACTCAACCAACACCGGAGGGCTTCCACATCCTCTTGCTGCTCTTCATGCTCAGAACCTGTCATCTGTGCATAATGGTATCGCTCAGGATTTATCCTTACCAAAGCAAGTCAAAAGAGAGAAAGCCTCAAATGAAGATGAAAAGAAAGAAGAAGAAAGGCACGGAGGAAGTGCTTTTTCTCTAGTTAGACCAAAAGTTGAGCCTGGTTCGCCCTTAGGAAATGTAATACTGCCTCCTGAGGATCTAGGCACTGGTTCAGGAACTGCAGCAGTTAGTCCTCTTCAACGAATGGCCTCAATTACTAATGCTTTGATCTCACAACCACCTTCTCAGCATCATCATTCCCCCTCACAAAGGCCACTTAAAGCTGTCTTACCACCAATCACTCAGCAGCAATTTGATCAGTTCAATAATTTGAATACTGAAGAAATAGTCAGAAAGGTAAAAGAACAACTTAGTCAGTTTTCAATAAGTCAGCGGTTATTTGGAGAATCGGTCCTCGGGTTATCACAAGGAAGTGTTTCTGACCTTCTTGCTCGACCAAAACCATGGCATATGTTAACACAGAAGGGAAGGGAGCCATTCATTCGTATGAAGATGTTTTTAGAGGATGAAAATGCAGTTCATAAACTAGTGGCTTCTCAGTACAAAATAGCTCCTGAAAAACTGATGAGAACTGGAGGATATGGAATAAATCCTAATCTTTTTTTAGGTGGGGGACCCCATAATAAATCTATGGCAGCAAACTGTGGAAAATTCGTCAATAGTGAAGCTTTTCTTCATAACACCAATATCCATATGCAACATACTACTTCTGCACCTACCCCAGTGCCGCCATTAACTCCTCCAGATATTAAAAAGACTGTAACACCTCAACAGTGTCAAACATCAATGCAGCAATACCCAACAATGAAAAATATGTCTCATGTATCTCCATCAGTTTATGAAATGGCTGCCCTAACCCAGGACCTGGATACACAGTCGATTACTACAAAAATTAAGGAAGCTCTGCTAGCCAATAACATTGGGCAGAAGATCTTTGGTGAGGCTGTTCTTGGATTATCTCAAGGATCAGTGAGTGAACTGCTATCTAAACCTAAGCCCTGGCATATGCTCAGTATTAAAGGGAGGGAACCTTTCATCAGAATGCAATTGTGGTTATCAGATTCCAATAACATTGATAAATTACAAGCAATTAAATCAGAAAGGAGGGAGCTAAACAAGAGGCGGAGAGGGTCTGGGCAGCAGGATAACAGTAGTGATACCTCATCGAATGACACTTCTGAATTCTATCACAGTAGTGCTGGAAGTCCTCCTTCTGCTAAAAAGCACCGTGTATTATTTTCAGAAGAACAAAAAGAAGCTTTAAGGATAGCTTTTGCATTAGATCCATATCCAAGTTTAGCTACAATAGAATTTTTGGCTAATGAGTTGAGTCTTGTTTCCAGAACTATTACTAATTGGTTTCACAATCATAGAATGAGAATGAAACAAAATTCGCAAGTTGAATCCTTAACAAGGGAAGGTCAAACTTCTGGATTTGACCCTGTACAGTTTCGGATATTACTTAGTCAACGATTAGGACTACCATTACCATTTCCTGCTCCTTTTTTCCAATCAAATAGTGATATCTCAAACATTATGTCAAGAAGTGCATTACCATTAAGAGAACAGGGTTTGGATCTTTCAATCAAGCATGAATCTGAGGGAGAAGATAATGAGAGTCATGTGGATTCTGAAGATTCATATTCTGGTGTACCTGAAGCACGAGTTCCAGAACCAAGGAGCTCAAGAAGAAAACCAGCTGCACCTCAGTGGGTAAACCCAGACTGGCAGCAAGAACCGGAAGTTATCATTAATGGTGTTTGTGTAATGCAGACTGAGGACTTTGAAAGGGACGGTAGGGAAGAAACAGTTCGAGTGGAGCCCACAGCAGTTCCTGAGGAACAAAGCACAACTATTGAGCAAACATCTGAAGTACCTTTAGAAGAttcaaaaccttctatttctgttaaacaggaagtaaaagatgaaaaatgggataatcagttctaa
Protein Sequence: MSGRTPEDNCIKMALRDRFSHQFEPSISQLLDDVQRLQSRIGKLQENSANQIARLEEELEHKRQHICRLEARLDAQKDYNELKRQLSCFRNAEEGAKVIEHESNKISEVSIKPPPVTTPSETQGEVPTLHNVETFGSFLGEEIVANWRRSLERSIVGPPGNWASPPEEGKPKIEETRERELDKTGSPNRELVNGSASPNGHEQEHVNSVLPNGMCALNIGINNNVLNSGPSLNLSDVMKSPFRFDDRSPFRFNEDPSCMVGRFGESLIPKGDPMEARLQEMLRYNMDKYANQNLDTLHIARRVRELLSIHNVGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVLLLKSLIPKKGKDGASMGVMSRGSENDITEERIAHILSEASHMMKPQQHDETHSNEDSKSPNHPQSSESPLGRDNSQTRRLKKYENDDIPQEQVVRIYQEELAKIMGRRLEDQNFPGLVFPHFLSGGSGEDVRIAMDAYHRELAKLNSTNTGGLPHPLAALHAQNLSSVHNGIAQDLSLPKQVKREKASNEDEKKEEERHGGSAFSLVRPKVEPGSPLGNVILPPEDLGTGSGTAAVSPLQRMASITNALISQPPSQHHHSPSQRPLKAVLPPITQQQFDQFNNLNTEEIVRKVKEQLSQFSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGGYGINPNLFLGGGPHNKSMAANCGKFVNSEAFLHNTNIHMQHTTSAPTPVPPLTPPDIKKTVTPQQCQTSMQQYPTMKNMSHVSPSVYEMAALTQDLDTQSITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDSNNIDKLQAIKSERRELNKRRRGSGQQDNSSDTSSNDTSEFYHSSAGSPPSAKKHRVLFSEEQKEALRIAFALDPYPSLATIEFLANELSLVSRTITNWFHNHRMRMKQNSQVESLTREGQTSGFDPVQFRILLSQRLGLPLPFPAPFFQSNSDISNIMSRSALPLREQGLDLSIKHESEGEDNESHVDSEDSYSGVPEARVPEPRSSRRKPAAPQWVNPDWQQEPEVIINGVCVMQTEDFERDGREETVRVEPTAVPEEQSTTIEQTSEVPLEDSKPSISVKQEVKDEKWDNQF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00339686;
90% Identity: iTF_00757212;
80% Identity: iTF_01298259;