Rneb010589.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- Nfat5
- Assembly
- GCA_948150685.1
- Location
- OX411306.1:59396514-59420130[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.64 1e+04 -2.3 0.0 33 58 110 134 94 140 0.68 2 2 1.3e-31 2e-27 97.6 1.9 1 169 164 324 164 324 0.93
Sequence Information
- Coding Sequence
- ATGACATTTCACCTAGAATATAAGACCATAGTTCTGGACCTCGGAGGAACTATGAAAATACTGAATGGAAAAGGAAAGGGGTATCGAAAAGGTGTTAAATGTACCCCCAGTAAACGCATGGGTCTCAAAATGATCGCTTCAAAAAGGGAAGAAATGACACCAGTTACTATGGATCCTTGTGAGAATTCCAATGACTCTGGTCTTGGTTTTGACCACATAGATTTTCCTGCTGCTCATTCAACATTTAGTGCACAAGAGTATTGTTGGGGTGGTGGTGAGGAAACTAAAAAACGGCGATATGACATTAAATTGGAGTCTGATAATGCCAATGATAATTTTACTTTTCCTCAAACAAGAATAGCTACTCACCAGTCCCAGAATGTGCCCTTAAGTCTCCGTACCAAAGGCAGTATTTCTGTTGGAAAAGGAAAAAGCAGCAAAGTAATGGTAGGTGGAAATCAAGGATTCAGTCGCAATGGAAAAATTCAGTTACAAATAATTTCTCAACCTGAAATGCAACATCGTGCGAGATATCAAACTGAAGGAAGTAGAGGTGCTGTAAAAGATAGATCAGGAAATAGCTTTCCGATTGTTAAGTTATGTGGTTACAACAAGCCAGCTACATTGGAGGTATACATAGGTACTGATCAAGGTCGAGTAGCCCCACATATGTTTTATCAAGCCTGTAGAGTTTCCGGAAAAAATTCTACCCCATGTATTGAGAAGAAGGTTGATGGGACAGTCCTTATTGAAATAGAATTGGATCCTGCTAAAGATATGACTGTAACATGTGACTGTGTGGGTATTCTTAAGGAAAGAAATGTTGATGTTGAACATAGGTTTCCTGAAGAAAGTTCTGGTCGCAGCAAAAAGAAATCAACACGTTGCAGAATGGTATTCAGGACAACCATTACACATGATGATAACACTGTTGAAACAGTGCAAGTTACTTCTCAGCCAATTATTTGTAGTATGTTTTACTTATAA
- Protein Sequence
- MTFHLEYKTIVLDLGGTMKILNGKGKGYRKGVKCTPSKRMGLKMIASKREEMTPVTMDPCENSNDSGLGFDHIDFPAAHSTFSAQEYCWGGGEETKKRRYDIKLESDNANDNFTFPQTRIATHQSQNVPLSLRTKGSISVGKGKSSKVMVGGNQGFSRNGKIQLQIISQPEMQHRARYQTEGSRGAVKDRSGNSFPIVKLCGYNKPATLEVYIGTDQGRVAPHMFYQACRVSGKNSTPCIEKKVDGTVLIEIELDPAKDMTVTCDCVGILKERNVDVEHRFPEESSGRSKKKSTRCRMVFRTTITHDDNTVETVQVTSQPIICSMFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -