Rneb036081.1
Basic Information
- Insect
- Rhaphigaster nebulosa
- Gene Symbol
- dl
- Assembly
- GCA_948150685.1
- Location
- OX411310.1:24762697-24768711[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.4e-75 7.1e-71 239.0 0.1 1 169 46 216 46 216 0.99 2 2 0.64 1e+04 -2.3 0.0 49 98 352 404 337 416 0.58
Sequence Information
- Coding Sequence
- ATGGATGGTCAAAATGTGGATGACAACAACTCGGCAATAAATATAAGTGATGTCATTGAGGTGATAGAAACAGACACAGCTTTTGGTTCAATGCAGACAAAAAGACCTAGTTCCGAGGGCCTACCAAATACCTATGTTAAAATTGTTGAACAGCCTGCTTCAAAAGCATTAAGGTTTCGTTATGAATGTGAAGGAAGATCAGCCGGAAGTCTTCCAGGGGTTAATTCAACTCCGGAAGTCAAAACATTCCCAACAATTCAGATTGTTGGTTATCATGGACGAGCGGTAGTAGTTGTGTCATGCGTGACAAAGGATCATCCATATAGGCCTCATCCACATAATCTTGTGGGAAAAGAAGGATGCAAAAAGGGAGTTTGCACTGTGGAAGTAAGTGGTGAAACAATGACTGCTACTTTTGCCAATCTCGGAATTCAGTGTGTTAAGAAGAAGGATATTGAGGAAGCACTAAAGGTCAGGGAAGAAATGCGAGTGGATCCATTCAGGACGGGTTTCGCTCATAAATCTCAAGCAAGTGGAATAGACCTGAATTCTGTGAGGTTATGTTTTCAAGCATTTCTAGAAGGCCCTCAACGAGGAAAATTTACAAGGGCAATTACTCCTGTTGTTTCGGAACCCATTTATGACAAAAAGGCAATGGCAGACTTGGTCATCTGTAAATTGAGTCATTGTTCAGCCTCAGTTGCTGGTGGGCAGGATGTGATACTTCTTTGTGAGAAAGTTGCTAAAGAGGACATATCTGTACGATTTTTCGAAGAAAAAGATGGTAAGATTTTTTGGGAAGGCTATGGTGACTTCACACCTACCCAGGTGCACAAGCAAACTGCTATTGCATTTCGTACTCCTCGTTATAAGAGTCTAGAGATCGATCAGCCAGTCCAGGCTTTCATTCAACTCCGCAGACCATCAGACGGTGCTACAAGTGAAGCATTGCCATTTCAAATCACCCCTCTCTCAGGTAGGCCTTTCTTCTGGTCTTTACGTCGCAATAAAGCAAATAACCTTACTTTCTCTGACATAATGCAACAGGGGGGAAAAGAGCGAGTTGAAGTCGAAAATGATAATAATAACAATAACAGTACGAGTGTAAATGAGGACCTTAATGACTGTGTTATGAAGCAACAAGATGAAAATTATTCTGAAGTAAAAAGTGATCCAATGAAAAATGTTATAGTTCTTCCTGATGCTTCAATAGATGATGTTGAAAATGAAGTGAATGGTAATTTTGATGAATTTCTGGATCATGTTAAATCTCTTGAAAATATGTATCCTGATAATAACAATGAAGCAGAATTCGGGATATATTCGAGTCTGCAATTGGCTATGAAAGATCCTTGTGATATGTTAGACACACCAACCGCTGAAGGATATGAGGACATTGCTCCTCCAAGGCCTTTAAAAATGTCTTCTATGAAGGAGGCCGAAGAAGTTCCTCCGTTACCTCCAAAACGAGCTAAGAAATCTCCTGCTCTTCCACCTCCACCCCACAAAAATAAACTTAATTTGTTCCAAAAACTTTTTTCTTCTACTACGAAAAGAAAGAAGAAACAAAGGGAATCTTCTCGTGAAGGGAGTGTTGTGTCTAGGATCAGTGAAAGGTCTCATTCGCTAGCTCCTAGCAGGGGCGATGTGGATCTCACGGAAGCTGAGCATTATGCTTTATATACATCTCTTGCACCACGTGCGACTGCGTCAGAATTTGATGAGATGTCTTTCTATTACAGTCCTATAGAACGACCTAAAGTTAATTAG
- Protein Sequence
- MDGQNVDDNNSAINISDVIEVIETDTAFGSMQTKRPSSEGLPNTYVKIVEQPASKALRFRYECEGRSAGSLPGVNSTPEVKTFPTIQIVGYHGRAVVVVSCVTKDHPYRPHPHNLVGKEGCKKGVCTVEVSGETMTATFANLGIQCVKKKDIEEALKVREEMRVDPFRTGFAHKSQASGIDLNSVRLCFQAFLEGPQRGKFTRAITPVVSEPIYDKKAMADLVICKLSHCSASVAGGQDVILLCEKVAKEDISVRFFEEKDGKIFWEGYGDFTPTQVHKQTAIAFRTPRYKSLEIDQPVQAFIQLRRPSDGATSEALPFQITPLSGRPFFWSLRRNKANNLTFSDIMQQGGKERVEVENDNNNNNSTSVNEDLNDCVMKQQDENYSEVKSDPMKNVIVLPDASIDDVENEVNGNFDEFLDHVKSLENMYPDNNNEAEFGIYSSLQLAMKDPCDMLDTPTAEGYEDIAPPRPLKMSSMKEAEEVPPLPPKRAKKSPALPPPPHKNKLNLFQKLFSSTTKRKKKQRESSREGSVVSRISERSHSLAPSRGDVDLTEAEHYALYTSLAPRATASEFDEMSFYYSPIERPKVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00165009; iTF_00714909; iTF_00757118;
- 90% Identity
- iTF_00165009;
- 80% Identity
- -