Rlae024969.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- dmd-4
- Assembly
- GCA_963920725.1
- Location
- OY987257.1:8693509-8698091[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2 9e+03 -2.3 0.1 32 44 16 28 14 31 0.73 2 3 1.7e-24 1.3e-20 74.0 12.2 1 47 41 87 41 87 0.98 3 3 0.84 6.4e+03 -1.8 0.3 23 32 269 278 264 281 0.78
Sequence Information
- Coding Sequence
- atgaattctatTAAATGTGTTGACAGTAAAGTGATTAGTAGTAGCactaaatgtataaaaattaagaatactcaaagtaaaaattataatcaatctttacaaaataaattattaaatccaCGAGTACCAAAATGTGCACGATGTCGAAATCATGGAATTATTTCAGGATTACGAGGACATAAAAAACATTGTACGTATAGAAGTTGTAGATGCCCAAAATGTGAATTAATCCATGAAAGACAAAGAATTATGGCAGCTCAGGTTGCTCTTAAGCGACAACAAGCTGTTGAAGATGCAATTGCTTTAAGATTGGCATCAAATGAAAAAGGTGTATCACTTGAAACATTACCACCAGGTAAAATATTTGGTATGACAGTAACACATCCGTGTCCAAGTCCCCAGCCGCCACCACAACCAATTTCACCATCTCATTCTGATAAAGAATCAATTCaatcaactTCATCAAATTCATCAAATACTTTTGTTTCACAAAGCGCAATAGATATGCTGGCACAATTGTTTCCGCATCGTAAAAGATCTGTATTGGAATTAGTATTGAAACGATGTGATTTAGATTTATTAAGAGCAATTGAACAATGTTCGCCATCACAATCATCGAGTGCATTTAGACCACCAATATCGCAGatttcaagTTCGATATCTTCTTCATCTACATCAACGCAATTACAAATGAATCAATCACTTCCACCGCAATCACATTATACTCCATTAATTGCTTATCCAAAATGGTTGTTGCCAATGTCTATTCCAGTTACTATGGGACATTTACCAAACTTGGCACCAAGATGTACTCTTCCAAATTGTCCATGTATGGATacttatcatttaaattaa
- Protein Sequence
- MNSIKCVDSKVISSSTKCIKIKNTQSKNYNQSLQNKLLNPRVPKCARCRNHGIISGLRGHKKHCTYRSCRCPKCELIHERQRIMAAQVALKRQQAVEDAIALRLASNEKGVSLETLPPGKIFGMTVTHPCPSPQPPPQPISPSHSDKESIQSTSSNSSNTFVSQSAIDMLAQLFPHRKRSVLELVLKRCDLDLLRAIEQCSPSQSSSAFRPPISQISSSISSSSTSTQLQMNQSLPPQSHYTPLIAYPKWLLPMSIPVTMGHLPNLAPRCTLPNCPCMDTYHLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644119; iTF_00643237;
- 90% Identity
- -
- 80% Identity
- -