Rlae027121.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- dmrta2
- Assembly
- GCA_963920725.1
- Location
- OY987257.1:38838199-38846996[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-27 1.8e-23 83.2 10.8 1 47 37 83 37 83 0.99 2 2 5 3.8e+04 -10.2 8.9 10 26 211 227 210 229 0.82
Sequence Information
- Coding Sequence
- atgagTTTGCCAAGTGGTGTGGATATGTCTAATTTAATGTCACAGCATCCTGTATTGGGTGCATTACCACCAGCATTTTTTTTACGTGCTGCATCTGAACGTTATCAAAGGACACCGAAATGTGCTAGATGTAGAAATCATGGTGTTGTGAGTGCACTTAAGGGACACAAAAGGTACTGTCGATGGCGGGATTGTGTTTGTGCTAAATGTACATTAATTGCAGAACGACAACGTGTTATGGCAGCGCAGgtagCATTAAGGCGACAACAAGCTCAAGAAGAAAATGAAGCACGTGAATTAGGTTTACTTTATTCAGGAGTACcgtcacaacaacaaaaacaacaacagcaacaacaatcaCAACAAAATGGTGATAATGGACAACCACCACCAGGAATGTTTCATCCTGGTATACCATCACCACCAAGTGAATTAGATGGTAATCAAAGAGTTCAATTTAGTGGAAGTAGTGAATCTGATGTTGAAAATCATAGAATTCGTTCAGATCGATTAGGCTTACCATATTCACCAGATAGAACAGAAGTTGATAGTCCtggttcGAAACGAGCTCGTTTATCAAATGAAACAGATCAGGATACTGGATCTGAATCATCACCAAGTAGTCCACATaatcatcaccatcatcatcataatcgtcaacataataaaaatttaaattttattaatttaccggGTCAATTGTCACCGGCACGAACAACCGGACGACCTAGTTCACCAGAATCAGATTTAGATGTTGATTCAGCACCAGATGAAGCAACACCAGAAAATCTTAGTTTAAAAAAAGATGATTCTACCTCACCGCCTAGTACCCCATCAGATAGTTTAACATTATTGCGTCACCATTCAAACGGAGGTAATGGTGGTagtaataatcataatattaataataataataacaataataataataataataataatggtggtATAAATGGTCAAGGTTTTATACCTTATCATCATCATTCACAATATATTAATCAATCTGCAACAATACAAACATCATTAAATAATGTTCAACAGCAACGTTCACCAGTTGATGTTTTATTAAGGGTATTTCCATCACGACGACGTAGTGAAGTTGAACAGCTTTTACAAAGATATCGTGGCGATGTTGTTCAAGCTATGGAAGCAATGTTATCTGGTGAAGATATTGTTCAAGCTATGAATAATGTATCATCAGCACCATCACCGCCATTTCCATTAAAATCAGCATTTTCACCATTAGTACCACCAGCTGCTGTATTTGGTTCACCAACTAGTCGTTATTCATTTATGCAAGCACATGCTAAACGATTTTTAACAGCACCATATACAGGAACTGGTTATATATCATCAATTATTCAATCTGAAAGTGATCAATCTGAATCAAATGGTACAGTAACTGATAGAAATAGTAATGCTGGTGATTCACAAGaatga
- Protein Sequence
- MSLPSGVDMSNLMSQHPVLGALPPAFFLRAASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYSGVPSQQQKQQQQQQSQQNGDNGQPPPGMFHPGIPSPPSELDGNQRVQFSGSSESDVENHRIRSDRLGLPYSPDRTEVDSPGSKRARLSNETDQDTGSESSPSSPHNHHHHHHNRQHNKNLNFINLPGQLSPARTTGRPSSPESDLDVDSAPDEATPENLSLKKDDSTSPPSTPSDSLTLLRHHSNGGNGGSNNHNINNNNNNNNNNNNNGGINGQGFIPYHHHSQYINQSATIQTSLNNVQQQRSPVDVLLRVFPSRRRSEVEQLLQRYRGDVVQAMEAMLSGEDIVQAMNNVSSAPSPPFPLKSAFSPLVPPAAVFGSPTSRYSFMQAHAKRFLTAPYTGTGYISSIIQSESDQSESNGTVTDRNSNAGDSQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643234; iTF_00644116;
- 90% Identity
- iTF_00643234;
- 80% Identity
- -