Rlae027676.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- Rel_2
- Assembly
- GCA_963920725.1
- Location
- OY987257.1:48517564-48522439[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-18 1.6e-14 55.2 0.1 1 168 44 210 44 211 0.78 2 2 1.9 1.2e+04 -2.9 0.0 97 108 304 315 243 339 0.56
Sequence Information
- Coding Sequence
- atgcGAACtagaattaaaagtgaaaataataatgatagtgGTGAATCATCATCATGGAATTCAGCATCTACTGGAGATTGCCGACAAAATCCAGCATTACCGCAATGGGATTTTACAttatTTTGCAGATTACAAATAATGAATCAACCGAAAGAATGTTTTCGTTTCCGTACCATAAAAGATGCAAAACATGGAAAATTGAAAGGAATTGATGGAAATGGTATTACTGTGAAAGTAGAAAATTATACGGGTGACAAAAGCGATGAAATTGTAGTATTATGTACTTTATATCAATTAGAAGAACCTTTCCAAATTTATGCACATCCTAATCTTTTAATGAATTTCGAAGGGTCCATCGTTACATATGATCCaattaattccaaattaaataatgatggaATAGCTACtttttctggAATGGGCATAGTAAAGCCacataaagataatataaaacaaactttaattgataaaattagtaGAATTCGGACTTATAAGCCTGAGTACACTACAAAGACTAaaatGGATAAAGTCGATATGAATAATATTCGATTATGTTTTGAAGCATTTAAGAAAGTAGATGATAAGTTTTTACCAATCTGTAAGCCTGTATTTTCCGAATATATCACAAATAGTGATAAAAGTGGTATTACCTGGTATTGTGAGAATTGTACTGGTGAAGCATCTGgcaaagataaatttattattacatgtGATTAtcagaaaaattttaaaaaaaataatattaaaatcagatTTTATGAACTTGGTgagaatgaaaaaataatttgggAAAAATATGCTGAAATAGAATCTCTAAAGTTTTGTCCACATAGCTTTATAATAACAACTCcagcatataaaaatattgatatttcaatagatgtaaaagtatattttcaagTATTGGCGGGcgatataaaaagtaaaaacaagGAATTTACATATAAAGCATCTATGTCACAAAAATCtggtgaaaaaagaaaaaaatcagtaGCAAGTAATTCCactattgataatattattttaaatttgcccgaagaaaAGAAAGCAGCATTTAGTACTGCTGAAGGTTTAATCAACTATTTTATAGGAAACAAAtcaccattttcattttttgatagTGTAGTGTCAGATAGCATTGGCGGATCATCTTTATTAGCATCAACATCCAGACAATCATCCCGACAATCATCCCGACAATCATCCAATAAAGATTTGGATTTATTGAAAGAACTGAAAGaagaaaacattttgcatcaattaattgaagaaaataaagaattcaAGCTAAATGAATTACTTGATGTAATAGAAAAgtataatcttttatataatcttggggaaaaaatattacaacttcAAAATGATGTTGGTAACACTTGTTTACATTTAGCATGCTACTTTAATAAGGTAGACTTTgttacaaaaatgttattattaggtgctgatccaaatataaaaaataataatggtgaTACAGCATTACATATTGCTGTAGAAAGAAACCAAGAATATTGTATATctgtaattatacaaaataaatatttaaatattaatttgacaaATGATAAAGGAAATTCTGCACTTTATTTggcgattttattaaaaaattataaaattgcaaagaaattaataaaaaatggaaatgcTGCAATTGataatcaaaatcaaacaaATGGTAATAATGTGTTACATTTAATTgttatgcaatttaatttattgaatagaCAAGATATCAAAGATATGATAAGATTTTTCCTACAAAACACATCAACTGATTTAAATGTAGAAAATCATTGCGGTTTAACACCTTTGGCAATAATCGAAGAATTTGACAATGATGATGTACAAGATATTATTGATTTACTTAGTAACAACTTGAATCCggaaaaagaatttgaaaatttatcatatgtttattaa
- Protein Sequence
- MRTRIKSENNNDSGESSSWNSASTGDCRQNPALPQWDFTLFCRLQIMNQPKECFRFRTIKDAKHGKLKGIDGNGITVKVENYTGDKSDEIVVLCTLYQLEEPFQIYAHPNLLMNFEGSIVTYDPINSKLNNDGIATFSGMGIVKPHKDNIKQTLIDKISRIRTYKPEYTTKTKMDKVDMNNIRLCFEAFKKVDDKFLPICKPVFSEYITNSDKSGITWYCENCTGEASGKDKFIITCDYQKNFKKNNIKIRFYELGENEKIIWEKYAEIESLKFCPHSFIITTPAYKNIDISIDVKVYFQVLAGDIKSKNKEFTYKASMSQKSGEKRKKSVASNSTIDNIILNLPEEKKAAFSTAEGLINYFIGNKSPFSFFDSVVSDSIGGSSLLASTSRQSSRQSSRQSSNKDLDLLKELKEENILHQLIEENKEFKLNELLDVIEKYNLLYNLGEKILQLQNDVGNTCLHLACYFNKVDFVTKMLLLGADPNIKNNNGDTALHIAVERNQEYCISVIIQNKYLNINLTNDKGNSALYLAILLKNYKIAKKLIKNGNAAIDNQNQTNGNNVLHLIVMQFNLLNRQDIKDMIRFFLQNTSTDLNVENHCGLTPLAIIEEFDNDDVQDIIDLLSNNLNPEKEFENLSYVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -