Rlae023334.1
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- Nfat5
- Assembly
- GCA_963920725.1
- Location
- OY987256.1:40750821-40767944[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-34 1.2e-30 107.7 0.9 1 168 209 368 209 369 0.96 2 2 3 1.9e+04 -3.5 6.6 51 91 969 1010 935 1075 0.58
Sequence Information
- Coding Sequence
- ATGTCAACAGCATCAACAATGACACCACGGATACACAGAAAAGGATTTCGGACACCGTCCAAACGGTATCCAGGCAAAGCATTACCTGGTAAATTACATTCAATGTCAAGGattggGCCTGGTAAAATTGGACCTGGTAAAAAGATAATATCAAGACCAAATCCACCACCATGTGATAATTCTAATGATAGTGGTTTTGGTTTTGATCAACATGTGGAACATGTTGTTCCACCACATTCACATCAACAAATGATTCGAACGGTACCATTATCcagatCAGATTATCATGATGATTCAATTAGTACTGATGGTTCTGATGATTTAATTCTATCAACAACAAGAATTCAAGCTCGTACAAAACGTAGGAAAATTGAAAGTCCTAGTATTATTCATATTGATAATGAGGATGCATGCAGTGATGAtgcatttatacaaaaaattgctaCAACAACAGCTTCAGCTGCAATATCAAATAGTCTGCCATGTACTGCAACTCCAACACCAAATACTATCACAaaatattatacaAATGGTGCCAAAAATACAACAAGACTGGGACTGAAAAGACCATCATCTCAAATGCAAACAAATACATATACAACATCAAAAGATGGAAGAGTTCAATTAGAAATTATTCAACAACCAGAACAACAACATAGAGCAAGatatcAAACTGAAGGTAGTCGTGGTGCTGTTAAAGATCGTAGTGGTAATGGTTTTccaattgttaaattaaatggttATAATCGACCAACAACATTACAAGTATTTATTGGTACTGATATTGGTCGAATAGCACCACATATGTTTTATCAAGCATGTAAAGTAGCTGGTAAAAATTCAACACCATGTAATGAGAAAAAAGTTGATGGTACTATGATTATTGAAATTGACTTTAAACCAGAATCAGAAATGACAATTACATGTGATTGTGTTGGTATTTTAAAAGAACGTAATGTTGATGTTGAACATCGTTTTCCAGATCATTCTACACAacgtaataaaaagaaatcaacACGTTGTCGTATGGTATTTCGTACACAATTACAATTAGATGATGGTACTACAGAAACATTACAAGTTTGTTCACAGCCAATTATATGCaCTCAACCACCTGGTGTAccagaaatatgtaaaaaatcattaatatcatGTCCAGTTGATGGCGGActtgaattatatgtaattggtaaaaatttcttaaaggaTACAGTTGTTATATTTCgtgaaaatgatgatgatatggGTCAGTTAGGTTCTGTTTGGGAACAAACTGTTGTACCAGATAAAGAATATTTACAGCAAacacATTTAATTTGTGTGGTGCCACCatatattcaacaaaatattattgaaccGATAACAATTCAACTTTTTATTATGTCCAGTGGTAAACGTAGTGAAAgtcataattttgtttatttgccAAAGGGCACACACAGTATTTTATCAGCATCAACAACATTAAGTACTTTACGTAGTACAATTTCCGGGTCACAAGATGTTCTACAATATACGGATAATCAGACGCAACCTACATTACCACAATCATTGGATTTATGGtcaacaaattcaaatacaGCCACATCAACAATAATTGAACCAAAACATGAATTAGATTCAGGTATGATGCCACcaccatcaacaacaacagTTCCAATTTGTGTTCGTCGACCATCAAATGGTTTAATGCAAGATCAAATTGTCGGACTACAACAAATTGTCAcgaataataatagtaatgttGTTAATactgcaaataataataataatctcaaAACTGAAATGATTGatgaaaattcacaaaattcaaTGTCATCCGATCAAATGCAAACAGAAACAACATTTGATCAATTACCAACAGtaacaaataatgataattcattagaacaaaattcaacaaataattttcgaaTAAGAAAATCAAGTTTACATATTATGGATATGCCGGGTATATTAGATGATGATAATATGCAAGGCTTTTCAAATAATACACAAACAACTGTTGTTACATCAGGTACAACACAAAATCAATCAAATGATATTAATACAATGAGTGTAGCTGCTGCAGCAGCTGCAGCTGTTGCAGCTGTTGAATTGGCCGTTAAACAAGAACAGATTGctaatgaaatacaaaataatatttttaatgcagCTGTTGTTGCACAAAATCAACAACaagttgataaatttttatgtagtttaGATACAagtttaaatggtttgaataaagtaaataatgGAGGTGTTCAGCTTAATAATGTTGTTGATCCGGTTGTAAATTCAATGTTTGTTAATGCGGCAGCTGCGACTAATGTTGTGTCAAATGAAACAactaatttacaaaatcatgGATTGTTTTCAGCATCGTTACAACAGTCTACACAACAGACAACATCACATAATGATATTGTTGGTATAACATCACAATCTGTACCACAACAACAAACAATTGGTCAACAATTTACCACCAATTCAACAGCATTGACTACaccaataaatcaaattttaaatttaacgcaTGATTCTGGATTAAAATTACTAAGAAGTTCATCGACATCATCAAATTGTTCATCATCGTCGTCATCATCAAGTTCCAGTATAAGTCCACAAGTTCAtcatgatttaatattaaattctgaacCTGCAGCTTCAATAAATTCAGTTAATATGCAAATAATATCACAATCATCGAATTCTTCATCATCATCTCAACAATCGCCATCCCCTTCACAAATTTCTActgatttgatattaaattctgCTGTTCCACCAAGTATTATGTGCTCACCAAATTCAGATTCAATGTTGGtaagtcatcatcatcatcatcatccattACATCAAGTAACAATACCGACTACAATATTAAATAGCCTTCAATCACAAAATGCACAAGAgacaattattaacaatattataatgcaacaacatcatcatcatcaacaacatcaacatcaacaacatcaacaacaacaacaacaacaacatcaacaacaacaacaacaacaaccccAACAACAAACAACACAACCAATAATTGTtggacaacaacaacaacaggcATCAACTGCAAATgctaatatgattataaaagcAGCGGCTGATTATATTTCATGCCAAGAACAACATATTCGTACAACAGAATCAACAATAAAtgctttaatttcattaaattcaaatccAATAATGTCAactgaacaacaacaacaagttacacaaattttaaatatatctccAAATTCTAGTATTTCATCATCTTCACCTCAATCGAATTCACAAAGTCCAAAAACTCAATCAAATGAATTAATTCAAACAACAGTAGCACAACCGTCATCACCACAACAGCGACAACAACAAATACTGAATCCCTTTACAAATTCAGTTACTAATACAGCAGTGCCAttggtaaatatattattaaatcatcATGATTCACCAAGAAGTACAGATTATTTGGCCAATAATCAAGGTACTCAAATTTTACAAGCAGTTTCgcCACAACAAAATCAAGAATCTCTTTTACATGCAGTTTCATTAGCAGCACAAAATAGTGGCCtagaaaaaccaaatttaagtGGTGGTTCAACAGTTGAACAAATTGCTGCTATTGCTGTAGCAGCTGTAGCCCAAACAACACAAACACCAGTAATAGCACCAGCAACAGCAACTGCAACAACAGCTATTCCACAAGAACTTACAACAATGTCTGATCAAgatttaattagttatattaatCCCAGTGCATTTGatcaaaATTTAACAACTGAATATCGGCCAAATTTTGACAATatgcatatggaaaataatgaCAATGATCCAGTCATTTCAGAAATTGatgtaatgttaaatttttttgaagataCTAGTAATGAATGTTATAGCAGCTCAGCTAAACTTCAATCTTTTTATTCAAGTCAAAATGATATTTTCTCCCGTAATAAAGAAGGTTTTTCTGATGAGCTAATAAAGCGATTTTGGATTTAA
- Protein Sequence
- MSTASTMTPRIHRKGFRTPSKRYPGKALPGKLHSMSRIGPGKIGPGKKIISRPNPPPCDNSNDSGFGFDQHVEHVVPPHSHQQMIRTVPLSRSDYHDDSISTDGSDDLILSTTRIQARTKRRKIESPSIIHIDNEDACSDDAFIQKIATTTASAAISNSLPCTATPTPNTITKYYTNGAKNTTRLGLKRPSSQMQTNTYTTSKDGRVQLEIIQQPEQQHRARYQTEGSRGAVKDRSGNGFPIVKLNGYNRPTTLQVFIGTDIGRIAPHMFYQACKVAGKNSTPCNEKKVDGTMIIEIDFKPESEMTITCDCVGILKERNVDVEHRFPDHSTQRNKKKSTRCRMVFRTQLQLDDGTTETLQVCSQPIICTQPPGVPEICKKSLISCPVDGGLELYVIGKNFLKDTVVIFRENDDDMGQLGSVWEQTVVPDKEYLQQTHLICVVPPYIQQNIIEPITIQLFIMSSGKRSESHNFVYLPKGTHSILSASTTLSTLRSTISGSQDVLQYTDNQTQPTLPQSLDLWSTNSNTATSTIIEPKHELDSGMMPPPSTTTVPICVRRPSNGLMQDQIVGLQQIVTNNNSNVVNTANNNNNLKTEMIDENSQNSMSSDQMQTETTFDQLPTVTNNDNSLEQNSTNNFRIRKSSLHIMDMPGILDDDNMQGFSNNTQTTVVTSGTTQNQSNDINTMSVAAAAAAAVAAVELAVKQEQIANEIQNNIFNAAVVAQNQQQVDKFLCSLDTSLNGLNKVNNGGVQLNNVVDPVVNSMFVNAAAATNVVSNETTNLQNHGLFSASLQQSTQQTTSHNDIVGITSQSVPQQQTIGQQFTTNSTALTTPINQILNLTHDSGLKLLRSSSTSSNCSSSSSSSSSSISPQVHHDLILNSEPAASINSVNMQIISQSSNSSSSSQQSPSPSQISTDLILNSAVPPSIMCSPNSDSMLVSHHHHHHPLHQVTIPTTILNSLQSQNAQETIINNIIMQQHHHHQQHQHQQHQQQQQQQHQQQQQQQPQQQTTQPIIVGQQQQQASTANANMIIKAAADYISCQEQHIRTTESTINALISLNSNPIMSTEQQQQVTQILNISPNSSISSSSPQSNSQSPKTQSNELIQTTVAQPSSPQQRQQQILNPFTNSVTNTAVPLVNILLNHHDSPRSTDYLANNQGTQILQAVSPQQNQESLLHAVSLAAQNSGLEKPNLSGGSTVEQIAAIAVAAVAQTTQTPVIAPATATATTAIPQELTTMSDQDLISYINPSAFDQNLTTEYRPNFDNMHMENNDNDPVISEIDVMLNFFEDTSNECYSSSAKLQSFYSSQNDIFSRNKEGFSDELIKRFWI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643856; iTF_00642983;
- 90% Identity
- -
- 80% Identity
- -