Rlae033411.2
Basic Information
- Insect
- Rhamphomyia laevipes
- Gene Symbol
- grh
- Assembly
- GCA_963920725.1
- Location
- OY987259.1:38517644-38603309[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.12 1.6e+03 -0.8 0.9 77 109 89 121 75 152 0.63 2 3 0.058 7.4e+02 0.3 0.8 77 112 255 290 237 316 0.62 3 3 1.5e-63 1.9e-59 201.7 0.4 24 221 570 762 556 764 0.94
Sequence Information
- Coding Sequence
- ATGGGTAGTAGAACAAAACACGTTAGAATGGGTtgcgctgaacaacgTCGTACAACTTGTTCATCAAATCCAGATTCACCATCAATGAATGgtggtgttgttgttgctgctacaTCATCTGATCAAGTTATAGCTACTGAGGTTATTAATCATGTTACAGCTGGTGGACAAATTACAGTAGTTACATCAAATTCACAATATATGCAATCATCATCACCACCAATACAATCACGTTATTTTCAACATCCTTTAgttaataatggtaataataatacaatgataaatataacatcacaacagcaacaacaacaacaacaaaatcataatagtcatcatcatcatcatcatcaacaacaacaaccgcCACCTCAAtatcaacaacagcaacatcaTATGCaacatgatgatgatgattcacatattaataataataataataataattgttcatCGCCAACAAGTATTAGTTTAGCAACATTAAATGGTGTACCACATCAGGTGCATCAAGTACAAAATTCAAATGGTAGTACGTCATatgtttatgaatattataaattatctgataaggataataataatggtacTCTACATTGGAGtTCCCCTACCAATGGTAAATTAAATGGTCAGACCACACCTCTAGATGTATCTGGCCTATCACAAAGTGAAATACAAGGTATATTATTAGGTTCACACCCATCATcgtcaacatcatcatcaacaacaactacaTCAACTGTTGTGTCGCCACAACAATCAGCTGGTACTGCTGGTAGTGCTGTTACTGTTGTAActgaacataataataataataatcaacatcatcaacaacaacaacaacatcatcaacatcatcatcagcaacaacaacaacatcatcaaggACAACAATCAATTAGTATTAAACGTGAACCAGAAGATTTACGTAAAGATCCAAATGGTCGTAATCAAAAGGTTTTGGTTGTACAATCACCATCACCATCAATACAAATTAAGGAACCACCTCCTAGTCCTGGAAGTCCATCAAACGAAACAATGTACGCTGCCACAGGCGGCACTCAAATTTACCTTCAGgGACCACATCAAACAAgttcaacaacaacatcaaatgTTAATGGACAATCACCTAGCCCTGGACCATATGTAACAACTGATCAATATGGTATGTACACAACACGTTTAGCAACTGGACCAAGTTCAACATTTATATCAGAACCATATTATCGTGAATATTTTGCACCTGATGGTCCTGGTTATGCACCAACTGCACGGACAATATATGGTGATAATGATGGACCACAACCAGGTACAACATATGAGGGTAGATTTACAACAGCACAACCAACATCAGCATCgcatacaacaaaaaatggtACACCTGTTTATGCTAAAACAGTTACAGCGGCTGGTTTAACAGTTGATTTACCAAGTCCTGATTCTGGTATTGGTGCTGATGCAATTACACCTCGtgatcaaaataatatacaacagtcATTTGATTATACAGAATTATGTCAACCGGGAACATTATTAGATGGCAATGGTGCAATACCAGTTTCAgttaataatatacaaagaaCTGTTAATGTACATCCAGGACAAAATAGTCCAACAACATCACTTGGTAATAGTAGTGCGGCAACAACAAGATCAAGACCATGGCATGATTTTGGTAGACAAAATGATGCTGATAAAATTCAAATACCAAAAATatttacaAATGTAGGATTCAAATATAATCTGGAAAGTCCAATTAGTTCATCACAACGCCGAGAAGATGATCgaataacatatataaataaaggacAATTTTATGGTATTACATTAGAATATATACCGGATGCAGATAAACCCCTTAAAAATACAACAGTCAAAAGTGTCATAATGTTAATGTTCCGAGAAGAAAAATCACCTGAAGATGAAATTAAAGCCTGGCAATTTTGGCATAGTCGACAACATTCTGTCAAACAACGAATATTAGATGCTgatACAAAAAATTCTGTTGGTCTTGTTGGATGTATAGAAGAAGTTGCACATAATGCAATTGCAGTTTATTGGAATCCATTGGAAAGTTCTGcaaaaATAAATATTGCTGTACAATGTTTGAGTACCGATTTTAGCAGTCAGAAAGGAGTTAAGgGTCTACCACTTCATGTACAAATAGATACATTTGAGGATCCACGAGATACACAAGTCTTCCATCGAGGCTATTGCCAAATAAAAGTCTTTTGCGATAAGGGTGCTGAAAGAAAAACACGTGATGAAGAACGTCGTGCTGCTAAACGAAAAATGACAGCTACTGGTCGAAAAAAAATGGATGAATTATATCATTCAGTTGCTGATCGATCTGAATTTTATGCAATGCAAGATTTGGGTAAATTACCAGTACTATTTACACCTGCTGAAGACATGGAAaagCTTTCTGGATTGATTCAACAGAACTTCTATGGTCATGAGACTGATTCACTTTCTGGTACACCAGATGGTCTTAAAGGTACACCACCGTTCCTTTTACATGGACAAAAAGCAACAACACcaacattaaaatttcacaatCATTTTCCACCTGATGTCCAGACTGACAAAAAAGATCATATATTGGAACAAGCTCTTGTACCTGGACCAATGTCCAATGATTTTGGTCCACCAATGAAACGAGGCCGAATGACACCACCAATTAATGAACGTATTATGTTATATGTACGACAAGAAAATGAAGAAGTTTATACACCATTACATGTTGTACCACCAACAACAATTGGACTTTTAAATGCGGTATGTTGA
- Protein Sequence
- MGSRTKHVRMGCAEQRRTTCSSNPDSPSMNGGVVVAATSSDQVIATEVINHVTAGGQITVVTSNSQYMQSSSPPIQSRYFQHPLVNNGNNNTMINITSQQQQQQQQNHNSHHHHHHQQQQPPPQYQQQQHHMQHDDDDSHINNNNNNNCSSPTSISLATLNGVPHQVHQVQNSNGSTSYVYEYYKLSDKDNNNGTLHWSSPTNGKLNGQTTPLDVSGLSQSEIQGILLGSHPSSSTSSSTTTTSTVVSPQQSAGTAGSAVTVVTEHNNNNNQHHQQQQQHHQHHHQQQQQHHQGQQSISIKREPEDLRKDPNGRNQKVLVVQSPSPSIQIKEPPPSPGSPSNETMYAATGGTQIYLQGPHQTSSTTTSNVNGQSPSPGPYVTTDQYGMYTTRLATGPSSTFISEPYYREYFAPDGPGYAPTARTIYGDNDGPQPGTTYEGRFTTAQPTSASHTTKNGTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGTLLDGNGAIPVSVNNIQRTVNVHPGQNSPTTSLGNSSAATTRSRPWHDFGRQNDADKIQIPKIFTNVGFKYNLESPISSSQRREDDRITYINKGQFYGITLEYIPDADKPLKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKMDELYHSVADRSEFYAMQDLGKLPVLFTPAEDMEKLSGLIQQNFYGHETDSLSGTPDGLKGTPPFLLHGQKATTPTLKFHNHFPPDVQTDKKDHILEQALVPGPMSNDFGPPMKRGRMTPPINERIMLYVRQENEEVYTPLHVVPPTTIGLLNAVC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00643848; iTF_00642975;
- 90% Identity
- iTF_00642975;
- 80% Identity
- -