Basic Information

Gene Symbol
grh
Assembly
GCA_949752835.1
Location
OX457088.1:58718470-58785150[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.74 7.8e+03 -3.3 0.3 112 133 73 93 48 117 0.58
2 3 0.13 1.3e+03 -0.8 0.8 85 116 264 297 243 316 0.53
3 3 4.1e-63 4.3e-59 200.3 0.2 27 221 571 760 557 762 0.94

Sequence Information

Coding Sequence
atgaataataataacGGTAATGGTGGTATTAATGGTGGTGTTGTTGTTTCACCAACATCTACAGATCAAGTAATTGGTACTGAAGTTATAAATCATGTTACAGCTGGTGGACAAATAACTGTAGTTACATCACAATCACAATATAATATGCAATCAACATCACCATCAATTCAAACACGTTATTTTCATCAACCATTACAAGTTAATGATacaaatacaatattaaatttaccatCCCAGCatcaaaatcataataataataataataataatattaataatcatcataatcatcatcatcaacaacaacaacaacaaccaccacCGCCacaatatcaacaacaacatcatatACAacatgatgataataataatggtgatttaaataatacaaattgttcatcaccaacaaaaatatttaatttaacaacatTAAATGGTGTACCACATCAGGTGCTCCATCAAGTACAAAATTCAAATGGTAGTACATcatatgtatatgaatattataaattatctgataaggataataataatggtggtaCTTTACATTGGAGTTCCCCTACCACAGGTAAATTAAATGGTCAGACCACACCTCTAGATGTATCTGGCCTATCACAAAGTGAAATACAAGGTATATTATTAGGTTCACACCCATCATcgtcaacatcatcatcaacaacaactacATCAACTGTTGTGTCGCAATCAAATGGtggtaatggtaataataatagtaatggtAATAATAGTAATGTTGCTGTTACTGGTAATACTGTTGTTGTAACTGAACataataatcaacaacaacaacaacaacatcatcataatcagcatcaacaacatcatcataATCAGCATCATCAAGGACAACAACAATCAATTAGTATTAAACGTGAACCAGAAGATTTACGTAAAGATCCAAATGGACGAAATCAAAAgGTTTTGGTTGTACAATCACCATCACCATCAATACAAATTAAAGACCCACCTCCCAGTCCTGGAAGTCCATCAAACGAAACAATGTACGCTGCCACAGGCGGCACTCAAATTTACCTTCAGGGACCACATCAAACAAGTTCAACAACACAATCAAATGTCAATGGAGGACACTCACCTAGCCCTGGACCATATGTAACAACTGATCAATATGGTATGTACACAACACGTTTAGCATCGGGACCAAGTTCAACATTTATATCAGAGCCATATTATCGTGAATATTTTGCACCTGATGGACATGGTTATGCACCAACAGCACGTACAATATATGGTGATAATGATGGACCACAACCTGGTACAACATATGAAGGTAGATTTACAACCGTTCATGCATCATCTGCAtcacatataacaaaaaatgttacACCAGTTTATGCTAAAACTGTAACAGCAGCTGGTTTAACAGTTGATTTACCAAGTCCTGATTCTGGTATTGGTGCTGATGCAATAACACCAAGAgatcaaaataatatacaacagTCATTTGATTATACAGAATTATGTCAACCGGGAACATTATTAGATGGTAATGGTGCAATACCAGTTTCAGTTAATAATATACAAAGAGCAGTTAGTGTACATCCAGGACAAAATAGTCCAACAACATCACTTGGTAATAGTAGTGCGGTAACAACAAGATCAAGACCATGGCATGATTTTGGTAGACAAAATGATGTTGATAAAATTCAAATACCAAAAATATTTATAAATGCAGGATTTAGATATATTCTGGAAAGTCCAATTAGTTCATCACAACGTCGTGAAGATGATCgaataacatatataaataaaggacAATTTTATGGTCTTACATTAGAATATATACCGGATGCAGATAAACCCCTTAAAAATACAACAGTCAAAaGTGTCATAATGTTAATGTTCCGAGAAGAGAAATCACCTGAAGATGAAATTAAAGCATGGCAATTTTGGCATAGTCGACAACATTCTATTAAACAAAGAATATTAGATGCTGATACAAAAAATTCTATTGGTCTTGTTGGATGCATAGAAGAAGTTGCCCATAATGCAATTGCTGTATATTGGAATCCATTGGAAAGTTCTGCAAAAatAAATGTTGCTGTACAATGTTTAAGTACCGATTTTAGCAGTCAGAAGGGAGTTAAGGGTCTACCACTTCACATTCAAATTGATACATTTGAGGATCCACGAGATTCTTCAATATTCCATCGAGGCTATTGCCAAATAAAAGTCTTTTGCGATAAAGGTGCTGAAAGAAAAACACGTGATGAAGAACGTCGTGCTGCTAAACGAAAAATGACAAATACTGGTcgaaaaaaattagaagaattATATCATACAGTTGCTGATCGATCTGAATTTTATTCAATGCAAGATTTGGTTAAATTACCAGTACTATTTACACCCTCGGAAGACATGGAAaagCTTTCTGGATTGATTCAACAGAACTTCTATGGTCAAGAGACTGATTCACTTTCAGATGGTCTTAAAAGTACACCGTTCGTTTTGCATGGACAAAAAGCATCAACACcaacattaaaatttcataatcatTTTCCACCTGATGTCCAGACTGATAAAAAGGATCATATATTGGAACAAGCTCTTGCACCTGGACCAATGACAGAATTTGGTCCACCAATGAAACGAGGCCGTATTACACCACCAATTAATGAACGTGTCATGTTATATGTACGACAAGAAAATGAAGAAGTTTATACACCATTACATGTTGTACCACCAACAACAATTGGACTCTTAAATGCgAtcgaaaataaatacaaaatatcaacaacaagtataaataacatttatcgAACAAATAAAAAAGGGATTACAGCGAAAATTGATGATGATATGTTATCTTATTATTTGAACGAAGATATATTCTTGTTAGAAGTACAACAAATTGAAGAAGATCTGTATGACATTACGTTAACTGAActtcaaaatcattaa
Protein Sequence
MNNNNGNGGINGGVVVSPTSTDQVIGTEVINHVTAGGQITVVTSQSQYNMQSTSPSIQTRYFHQPLQVNDTNTILNLPSQHQNHNNNNNNNINNHHNHHHQQQQQQPPPPQYQQQHHIQHDDNNNGDLNNTNCSSPTKIFNLTTLNGVPHQVLHQVQNSNGSTSYVYEYYKLSDKDNNNGGTLHWSSPTTGKLNGQTTPLDVSGLSQSEIQGILLGSHPSSSTSSSTTTTSTVVSQSNGGNGNNNSNGNNSNVAVTGNTVVVTEHNNQQQQQQHHHNQHQQHHHNQHHQGQQQSISIKREPEDLRKDPNGRNQKVLVVQSPSPSIQIKDPPPSPGSPSNETMYAATGGTQIYLQGPHQTSSTTQSNVNGGHSPSPGPYVTTDQYGMYTTRLASGPSSTFISEPYYREYFAPDGHGYAPTARTIYGDNDGPQPGTTYEGRFTTVHASSASHITKNVTPVYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGTLLDGNGAIPVSVNNIQRAVSVHPGQNSPTTSLGNSSAVTTRSRPWHDFGRQNDVDKIQIPKIFINAGFRYILESPISSSQRREDDRITYINKGQFYGLTLEYIPDADKPLKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSIKQRILDADTKNSIGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQIDTFEDPRDSSIFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTNTGRKKLEELYHTVADRSEFYSMQDLVKLPVLFTPSEDMEKLSGLIQQNFYGQETDSLSDGLKSTPFVLHGQKASTPTLKFHNHFPPDVQTDKKDHILEQALAPGPMTEFGPPMKRGRITPPINERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMLSYYLNEDIFLLEVQQIEEDLYDITLTELQNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01297136;
90% Identity
-
80% Identity
-