Rbic060220.1
Basic Information
- Insect
- Rhamnusium bicolor
- Gene Symbol
- CSRNP3
- Assembly
- GCA_029963845.1
- Location
- JANEYF010004991.1:58441-60750[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1 4.3e+04 -3.8 0.3 57 84 65 92 48 113 0.41 2 3 5.5e-104 2.2e-99 333.9 7.3 1 218 245 454 245 456 0.94 3 3 0.16 6.4e+03 -1.1 0.3 73 105 459 491 452 515 0.35
Sequence Information
- Coding Sequence
- ATGGGGTCTAACGAATCAACGATGGAGTCTTCATCAATCCCAATGATGCAAGCCGAAAACCAGACCGTACTACATCCAACGCATGGAACATTATTCGAAAATCCGAATGTTTTTGATCCTGTTAATGTTATTGTTGAAAAACCTTCAAGTACAAATCACACAGACTTGAGCGACTATAATGAGGTGCGTGATAATTCTAAAATAAGTATGAAGCCAAAATCAAACGAAGAAGCAATAGATAATGGTGATGAAAGGTTAGGAACTGATTCACTTAATCTGAAAAACGAAGATGAACATTTAAATGATGGCGAGGATTCTGCTACGGAAAGTTTACCCCCTGCAGAAGAACTTACCGAAGAACCCCACGACAGATCCGATGGTTCTGATTCGGGACTCGGATCAGAGTTATGTGAAGAGAGGCCGCAGGAAAATGCTACAAACATAGAAAGCGACAGCGAAACATCGTTTTTGTACAGAATAAATGATGAGACCATCACCAATAATCACTTTGATGACTTTACTAGTCAAAAAACTCAATCAGACTTCGATCTGCCCTCCACTAGCTCGCAGGAATCTTCAAAAGATAACGAGCTGAATGGTTTAGCGGAAAGCGCTAAAgaaatagcaaaaaatattgGGGACATTCTGAGTGCAGCACAATCAAAAAAGCCTATCAAAAGTAGTTTAAAACGAAAAATCTCTTCTGACAATGATACGGATCAGCCTAACGTTAAGAAAAGACGAGGGATAACCTTCGACAGCGTTACAGTTTTCTACTTCCCCAGAGCGCAGGGTTTCACGTGCGTTCCCTCACAAGGCGGCTCGACGCTGGGCATGGGAGCTCAACATTCATATGCTAAGAAATTCTCCCTTACAGAACACGCTGTAGAGCAACGCAGGATCCATCGACAACTTCTGCAACAGTTAAGATCGGAGCGCAACGTAACAGGCGGTAACGCGGCTTCATCCAGTGACGAGAGCGACAGCGAAGACGAACCCAGCGACGCTTCCGAGTCCGAAATGGATCTGGATAATTATTACTTTCTGCAACCTGTTCCCACCAGACAACGGCGGGCGTTATTGAGAGCAGCAGGTGTACGTAAAATAGATTCGCTAGAGAAAGACGAATGTCGAGATATTCGCTCATCACGAGAATTTTGTGGTTGTGGATGTAAAGGTTACTGTGATCCGGACACTTGTTCGTGCAGCCAGGCTGGCATTAAATGCCAAGTTGACCGGTTAAACTTCCCATGCGGTTGCTCACGCGATAATTGTGGAAATTCTAGCGGTCGCATAGAGTTCAACCCTGTTCGTGTTCGTACACATTTCATTCATACTCTTATGAGACTGGAATTGGAAAAGAAACAGGAGAAAGAAGAAGAGATGAAAACCGATAAAAAAGACACGGCCAATTGGATGAACAATGAAAGGCTCAACggaaattatcaaaataaagaGGACCACACAGAAACAACGTCGAATAGTAaaggtgtaaataaatataacagtaaTCTTTTAAGAGACGTTAGCTTAAACGCACACGTGGAAGTGGAAAACTGCGTACACAACGGCAGCTTTACAAATCTGCATTACGGAGCTCCAGGTGAGGGCCCGGGGACTCTTACTCATAGCCCGCCCGGATTCTCGAACCTACCAGATCGCGGAGATTCCTTAGACTTGTATACTTTTCGCGAAAATTGTTACGGAGATGAGACAGGACGGGACGGTCCCGCGATGGAAAGAAAACAGCAGCAGCCCTTTCCGCCCACACAAGGGTTTCACTTCCCCGACCCCAGGTTTTCTGATGTCGGTTTCCCGGCCGATGCCGCCCCCTACCCTTCGCCATCCAATCAATACACGCAGCCGTACCAGACTAGTTTCGCCGACTTCTCTCCAGTCTTCAACCCTTACGGAGGAATGTACGCCCCTGAATTCGGCACGAAGCCGCTAGAAGGGACCTTTCACCAACCTTCCACCGGATACGAGCACTTTTCTAATGATAATTTTCCAGCCGCTAGCGTAGAATCCAAAGAGAACCAATACACTAGTTTAAATCCCATAGGGGCCAATAACAAAATCGAATCCTtttctgaattattaaatgGTCGTTATAATTATGTGGGGTATGAGGAGAGGAACAGTTTTTCCGGCTTAGATCATACCGAAGCGCCTGCCAATAACACTAATGAAAGGACAGAGAAAACCACCGTAAACTTGACCAATAATATCAATGCAAATAGTTCTGACGACTGCGACGAGAACTTTGGGGAAATTATAAAGAAGTCTATGGTAGAAACCGTTTCagcataa
- Protein Sequence
- MGSNESTMESSSIPMMQAENQTVLHPTHGTLFENPNVFDPVNVIVEKPSSTNHTDLSDYNEVRDNSKISMKPKSNEEAIDNGDERLGTDSLNLKNEDEHLNDGEDSATESLPPAEELTEEPHDRSDGSDSGLGSELCEERPQENATNIESDSETSFLYRINDETITNNHFDDFTSQKTQSDFDLPSTSSQESSKDNELNGLAESAKEIAKNIGDILSAAQSKKPIKSSLKRKISSDNDTDQPNVKKRRGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMGAQHSYAKKFSLTEHAVEQRRIHRQLLQQLRSERNVTGGNAASSSDESDSEDEPSDASESEMDLDNYYFLQPVPTRQRRALLRAAGVRKIDSLEKDECRDIRSSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKKQEKEEEMKTDKKDTANWMNNERLNGNYQNKEDHTETTSNSKGVNKYNSNLLRDVSLNAHVEVENCVHNGSFTNLHYGAPGEGPGTLTHSPPGFSNLPDRGDSLDLYTFRENCYGDETGRDGPAMERKQQQPFPPTQGFHFPDPRFSDVGFPADAAPYPSPSNQYTQPYQTSFADFSPVFNPYGGMYAPEFGTKPLEGTFHQPSTGYEHFSNDNFPAASVESKENQYTSLNPIGANNKIESFSELLNGRYNYVGYEERNSFSGLDHTEAPANNTNERTEKTTVNLTNNINANSSDDCDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01226907;
- 90% Identity
- iTF_01289984;
- 80% Identity
- -