Phis014155.1
Basic Information
- Insect
- Pogonocherus hispidulus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963924545.1
- Location
- OZ004694.1:7069621-7071909[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.68 1.9e+04 -3.1 1.2 70 89 52 71 8 97 0.42 2 3 1.9e-104 5.5e-100 335.4 8.1 1 218 238 447 238 447 0.94 3 3 0.11 3e+03 -0.5 0.6 71 105 450 485 445 509 0.38
Sequence Information
- Coding Sequence
- ATGGGGTCTAACGAGTCTACTATGGAATCGTCATCGTCCACCATTATGCAAGACGGAACCCAGAACAGCAAAAATGCAACAGTTCAAACGCTGATCGAGAAATGTAATGTAGAATCTGTAAATGTTATTGTTGAAAAGCCTTCTAGTACAAACCAGATAGACTTGAACGACTGTAATGAGACGCGTGATAATCCTAAAGACAATGCGGAGCCAAAATCAAACGAAGAAGCAATAATTAATAGTGAGGAGATCGATTCGCTTAATCTGAAAGACGGCCAAGAAAACTTGAATGATGGCGAGGATTCGGCCACGGAAAGTTTACCCCCACCAGAAGAACTGATCGAGGAACCCCACGATAGATCTGATGGTTCCGACTCGGGACTGGGATCGGAGCTGTGCGAGGAACGGCCCCAAGAAAGCGCAACAAACATTGAAAGTGACAATGAATCGTCATTTTTATACAGGATAAACGACGAAGCTATGACAAATAATCACTTCGAAGATTTTCCTAGTCAAAAAGCTCACACAGATTTTGAGCTACCCTCCACAAGTTCGCAAGCATGTTTAAAAGATAACGAGCTGGAAGAAAGCGCTAAAGACATAGCAAAAGACATCGGCGACATCCTGAACGCAGCACAATCAAAAAAGCCGATCAAAAGTAGTTTAAAACGAAAAATCTCCACTGACAGTGACGCCGACGAACCTAAAATGAAGAAAAGACGTGGCATAACCTTTGACAGCGTCACAGTATTTTACTTCCCTAGAGCGCAGGGATTTACCTGCGTCCCCTCGCAAGGAGGATCCACGCTGGGTATGGGATCGCTCCATACGCACGTGAAGAAGTTCTCGCTCACTGAACATGCAGTAGAGCAACGCAGGATCCATCGCCAGCTGCTGCAACAATTGCGATCGGAGAGAAACGTAACAAGCGCGACGACGGCATCTTCCAGCGACGAGAGCGATAGCGAGGATGAACCCAGCGACGCGTCCGAGTCCGAAATGGACGTCGACAATTACTATTTCCTGCAACCTGTTCCCACGAGGCAGCGCAGAGCGCTACTCAGGGCCGCAGGTGTCCGCAAGATAGATTCTCTAGAGAAAGACGAATGCAGAGATATTCGCTCCTCCCGAGAGTTTTGTGGCTGTGGATGTAAAGGTTACTGTGATCCGGACACTTGTTCGTGTAGCCAAGCGGGCATCAAATGCCAGGTAGATCGACTAAACTTCCCATGCGGCTGCTCGCGAGATAACTGCGGGAATTCCAGCGGACGTATAGAATTCAATCCTGTACGCGTCCGCACTCATTTTATTCACACCTTGATGAGATTGGAACTGGAGAAGAAGCAAGAGAAGGAGGAGGAAATGAAAACGGACAAGAAGGACACGGCTAGCTGGATGAACAATGAAAGGCTAAGCGCGAACTATCAGCACAAGGAGGACCACACAGACTCGACGTCGAACAGTAAACTAGGTGTGAATAAGTACAACAGCAATCTTTTAAGAGACATTAGTTTAAACGCACACGTGGAGGTGGAGAACTGCGTGCACAACGGCAGCTTCACCAACCTGCATTACGGAGCTCCGGGCGAAGGGCCGGGGCTGCTCTCCCACAGTCCGCCCGGATTTTCCAACCTACCAGATCGAGGAGACTCTCTGGATTTGTACACGTTTCGCGAGAATTGCTACGGAGAAGAGACTGTGCGGGACGGTCCCCCGATGGAAAGAAAGCAGCAGCAGCCGTTTCTGCCCACCCAAGGGTTCCACTTCCCCGACCCCAGATTTGCCGATGTTGGATTCCCAGCCGGTGGCGCGCCCTACTCGGCGCCGTCCAATCAATACACGCAGCCGTACCAAACCAACTTCGCCGACTTCTCTCCTGTCTTCAACCCATACGGAGGAATGTACGCTCCTGATTTCGGCGCGAAACCTATAGAAAGCGGTTTCCAGCAGCCCAGCGCCAGTTACGAGCACTTTTCCAGCGATAACTTCACTTCAGCAAGCAGCGTGGACACCAAGGAGAACCTTTACACCAGCTTGAATCCGATCGGGGCCAATAACAAGATCGAATCCTTTTCTGAGCTGTTAAACGGCCGTTATAATTATTCTACTTACGAGGAGACCAACGCATTTTCTGGATTAGGCCCCGCCGAAGAGGCCGGCGATAACGCCAATGAAAGGATAGAGAAAACCAACACGAATTCGACCATTAACTCGAGCAATTCCGAGGACTGTGACGAGAATTTTGGAGAAATTATTAAGAAATCCATAGTAGAAACTGTTTCagcataa
- Protein Sequence
- MGSNESTMESSSSTIMQDGTQNSKNATVQTLIEKCNVESVNVIVEKPSSTNQIDLNDCNETRDNPKDNAEPKSNEEAIINSEEIDSLNLKDGQENLNDGEDSATESLPPPEELIEEPHDRSDGSDSGLGSELCEERPQESATNIESDNESSFLYRINDEAMTNNHFEDFPSQKAHTDFELPSTSSQACLKDNELEESAKDIAKDIGDILNAAQSKKPIKSSLKRKISTDSDADEPKMKKRRGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMGSLHTHVKKFSLTEHAVEQRRIHRQLLQQLRSERNVTSATTASSSDESDSEDEPSDASESEMDVDNYYFLQPVPTRQRRALLRAAGVRKIDSLEKDECRDIRSSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKKQEKEEEMKTDKKDTASWMNNERLSANYQHKEDHTDSTSNSKLGVNKYNSNLLRDISLNAHVEVENCVHNGSFTNLHYGAPGEGPGLLSHSPPGFSNLPDRGDSLDLYTFRENCYGEETVRDGPPMERKQQQPFLPTQGFHFPDPRFADVGFPAGGAPYSAPSNQYTQPYQTNFADFSPVFNPYGGMYAPDFGAKPIESGFQQPSASYEHFSSDNFTSASSVDTKENLYTSLNPIGANNKIESFSELLNGRYNYSTYEETNAFSGLGPAEEAGDNANERIEKTNTNSTINSSNSEDCDENFGEIIKKSIVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00110549; iTF_01014480; iTF_00722038; iTF_01369403; iTF_00886014; iTF_01289984; iTF_01296196; iTF_01310517;
- 90% Identity
- -
- 80% Identity
- -