Rgig025319.1
Basic Information
- Insect
- Rhagophthalmus giganteus
- Gene Symbol
- BTBD9
- Assembly
- GCA_036326145.1
- Location
- JARFJA010000093.1:5944183-5950372[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.39 1.7e+02 3.2 0.0 5 31 129 155 125 159 0.86 2 4 0.42 1.8e+02 3.1 0.0 62 108 176 225 166 227 0.83 3 4 1.1e-16 5e-14 53.2 0.0 23 106 613 698 605 702 0.91 4 4 1.2 5e+02 1.7 0.0 78 107 702 731 696 734 0.86
Sequence Information
- Coding Sequence
- ATGGCTGCTCGATCGTTTATTGGAACCTGGgaggtGATTGGATGTGGGTATATTAATGGAAGCCATACAGAGAATGTAGGACTGGAAGGTGTTCGATTTCGATTAGACGAAACCGGAGACGTTATTTGGACAGTATGCGAAGAATTAAAAGCAGTTCCCTTGTTCAGTTGTGAAACATACGAAATATACAGCACTTCGGTTTTAGGAACGGTTTTACGGTTTGGTGCATATGCGGGACATATCATCGAATTTAAGTGCGATCAAATTGAACCCAGAGATACTGTAATAATGACGTGCGAGGGATGGTGCATATTGCGTTGTAAACGAATTCAAGAAGAACCGAACGAACATTCTTTAAACACGACATTTTCATTGAAGCCCGCATTAGAAGATGGTTATTTCGGCGACGTCAAGATCACTGCCGCTAATAATAAACATTTTCAGTTACATTCGATCATTCTTCAGTTGCTCGGAAATGAAATACCGTGGCAGTCACAACCGCCCCCATTCTCTGGATTGCCAGAGGACGTGTTGGGGACgatattgaattttttgtatgCCGAATGCTTGCCGGAAACTTTAACTGAATTGACTGCTCGTCAAGTGATTACTGCCAGTGCACAATACGAAAGCCTTGCTAAGCTCGTGACGCTGTGTCAgctctatttaaaaaacatggCTTTAAAACAACaaataataggACTAGTCAACGATATGCATACGTCTGCAAATCAAATAATCGAACATTTTCACACTCGGCATAAACACTCGCCAGCAAATACTATAGGATCGAACCCTGCCAAGCTATGTTTTGTCGTTAAACAGTCGGTGCGCGATGCCGCCGTAGtcGGCGCTAAACTGCTTCTGCTGTGCGATTTGTTTACGAAACGAAAAAACGAACTGTCGAAAGAGGAGAGGCACGAAATCATTCGCTATGCCAAGTCTCGTTTGTCCATATTCATGATGCAACTGCACAAGTTCTTGCAGGCCGTTAAAAACACGTTTAGTTCGATGACTGCCGTGCACAGAAATGAAGTTGCCACGTACCTAGTGCCGGAGATAGAAATAATACTCGATACGATATCTACGTTTATAGTGGAAGTGGAGAAGGCGTTGCACCAAATAATTCAGGTCCTCTCCCCGCACGACGACGTACGGAAAAAGTCGAGCATCGGCGACATGCTCGGCAAATCGCTCAGGAATGTGTTGCATATTCGCGAATTAACGAAATTACGAAATTTCCACGAACACATCACGTGTAGCCTTGAATTGCTGTTGCACAAAAAggagaatttttattacatgaCTCCCGCTCAAAAAGTTAGGTCCGTGGCGAGAAATCTCGAACTGTTAATAGAAGAGTTGCCTCTATTTTTGTTCAACTTCGAGCAAGTTACAGATGCCTTAGACGATAAATTGGAATGGagagaatttaaattttgttttaaagtaGGAACCAGCAAAGTGGACGTTATGGTGCAAGTGTGCGAATTGGTCCAAAGAGATGCGTTCACGCAATCTATTTACAGTTTAGGTTTATTAGATGCTAGTAAGGTGACGTCGTACGCGGAGGACTGCCAAAGAATTCCCTCGAGCGCGTCGAGTTCCACACCGAAACAACATCATCACGGATATACGTTAAATTTAGTCGAATCTTTGTGCATCTCCCCTTCGCCGGTTAACAGCGACCTTTCCAAGCTGTGCCTACAACTGTTAAAAACCGAAATCGGCACGGACATGGAATTCGAAATAATAGTGAGCAACGGTTCGTCCGAGCAGACAGTCAGAGAGCACGCGCAAGAAGTTGCTAGTCCTGTCGAATACGAACGTTGCGTTATAAAAGCCCATAGGGTCGTAGTTGCGGCCAGGTGCGATTGGTTTCGAAGAGCGCTCCTATCCGGCATGCGAGAAGCCATAGATAAGAAAATTACAATTCACGACACCAATCCGGTTGTGTTTCgtctatttttgaaatatttatatagcgGACGATTACGTCAAAATTCGCTATCCGTCGATCAACTCGCCGAATTGCTGTTGTTAAGCGACCGTTACGAGGTCGACTCCTTAAAGCAAGTCTGCGAGTACGGTTTACATTCCGGCATCGACGAAGATTCGGTTTTGTATTTTCTCAGCATGGCCGATCAGTATAACGCGAGGATATTGAGGAACGcctgtttaaattttatatctgtGCATAACGAAATAACCGAAAGCGAATTGTTCTTCGAATTGCCCGTTGCCTTACAAGCCGAAATTTTCGATTGCGTCTGGACGCAGCCCCCGTCGAGAAAATCGACGGCCGCAGATCCCCTGTTGCCTGCACAGAGCACGCCGGCTAGTCTGGGTACGAGCAATTCCGAACTGCAAAGGGGCGATCCCGATTTGCAGTTCACGATACAGGCCGGAAATTCGAACAGTAGCTCTTTAGAAGATTTACCTATCAGTCGTGATTCGGCGCGTCTAGAAAATTCCATATTACTATTACGGGACATACTTGGCGAGACCGTTCCTCGAGAGGAGTTAGTTCAAGTAATTTTGGCCGCAGATTATGATTTATGTCGTGCagtaaatttcttttattctgAAACCGATGACGCGTAG
- Protein Sequence
- MAARSFIGTWEVIGCGYINGSHTENVGLEGVRFRLDETGDVIWTVCEELKAVPLFSCETYEIYSTSVLGTVLRFGAYAGHIIEFKCDQIEPRDTVIMTCEGWCILRCKRIQEEPNEHSLNTTFSLKPALEDGYFGDVKITAANNKHFQLHSIILQLLGNEIPWQSQPPPFSGLPEDVLGTILNFLYAECLPETLTELTARQVITASAQYESLAKLVTLCQLYLKNMALKQQIIGLVNDMHTSANQIIEHFHTRHKHSPANTIGSNPAKLCFVVKQSVRDAAVVGAKLLLLCDLFTKRKNELSKEERHEIIRYAKSRLSIFMMQLHKFLQAVKNTFSSMTAVHRNEVATYLVPEIEIILDTISTFIVEVEKALHQIIQVLSPHDDVRKKSSIGDMLGKSLRNVLHIRELTKLRNFHEHITCSLELLLHKKENFYYMTPAQKVRSVARNLELLIEELPLFLFNFEQVTDALDDKLEWREFKFCFKVGTSKVDVMVQVCELVQRDAFTQSIYSLGLLDASKVTSYAEDCQRIPSSASSSTPKQHHHGYTLNLVESLCISPSPVNSDLSKLCLQLLKTEIGTDMEFEIIVSNGSSEQTVREHAQEVASPVEYERCVIKAHRVVVAARCDWFRRALLSGMREAIDKKITIHDTNPVVFRLFLKYLYSGRLRQNSLSVDQLAELLLLSDRYEVDSLKQVCEYGLHSGIDEDSVLYFLSMADQYNARILRNACLNFISVHNEITESELFFELPVALQAEIFDCVWTQPPSRKSTAADPLLPAQSTPASLGTSNSELQRGDPDLQFTIQAGNSNSSSLEDLPISRDSARLENSILLLRDILGETVPREELVQVILAADYDLCRAVNFFYSETDDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00789493; iTF_00978524; iTF_00399680; iTF_00153639; iTF_01345844; iTF_00641689;
- 90% Identity
- -
- 80% Identity
- -