Basic Information

Insect: Rhagonycha lutea
Gene Symbol: stc
Assembly: GCA_958510855.1
Location: OY294036.1:80308518-80320172[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4 3.6e+04 -4.2 1.6 15 19 416 420 415 420 0.81

2 14 0.13 1.2e+03 0.6 0.2 4 10 449 455 448 456 0.96

3 14 2.5e-06 0.023 15.7 13.1 4 19 465 480 462 480 0.93

4 14 7.3e-07 0.0066 17.4 10.1 3 18 518 533 516 534 0.90

5 14 2.1 1.9e+04 -3.2 1.2 6 10 564 568 563 568 0.90

6 14 6e-10 5.5e-06 27.3 13.4 1 19 574 592 574 592 0.98

7 14 8.2e-06 0.074 14.1 19.2 1 19 632 653 632 653 0.87

8 14 2.8 2.5e+04 -3.6 2.0 5 10 682 687 682 687 0.93

9 14 0.0056 51 5.0 11.0 1 11 693 703 693 715 0.91

10 14 2.3e-09 2.1e-05 25.4 17.5 1 19 720 738 720 738 0.98

11 14 2.9 2.6e+04 -3.7 1.9 6 10 767 771 766 772 0.64

12 14 0.00077 7 7.8 8.1 10 19 785 794 783 794 0.93

13 14 1e-07 0.00091 20.2 15.4 1 19 830 849 830 853 0.89

14 14 0.0078 71 4.5 12.0 1 18 859 877 859 878 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4	3.6e+04	-4.2	1.6	15	19	416	420	415	420	0.81
2	14	0.13	1.2e+03	0.6	0.2	4	10	449	455	448	456	0.96
3	14	2.5e-06	0.023	15.7	13.1	4	19	465	480	462	480	0.93
4	14	7.3e-07	0.0066	17.4	10.1	3	18	518	533	516	534	0.90
5	14	2.1	1.9e+04	-3.2	1.2	6	10	564	568	563	568	0.90
6	14	6e-10	5.5e-06	27.3	13.4	1	19	574	592	574	592	0.98
7	14	8.2e-06	0.074	14.1	19.2	1	19	632	653	632	653	0.87
8	14	2.8	2.5e+04	-3.6	2.0	5	10	682	687	682	687	0.93
9	14	0.0056	51	5.0	11.0	1	11	693	703	693	715	0.91
10	14	2.3e-09	2.1e-05	25.4	17.5	1	19	720	738	720	738	0.98
11	14	2.9	2.6e+04	-3.7	1.9	6	10	767	771	766	772	0.64
12	14	0.00077	7	7.8	8.1	10	19	785	794	783	794	0.93
13	14	1e-07	0.00091	20.2	15.4	1	19	830	849	830	853	0.89
14	14	0.0078	71	4.5	12.0	1	18	859	877	859	878	0.87

Sequence Information

Coding Sequence: ATGGAATTTTTTGATTCGAATTTTGTAGAAGCTAATAGGTGGActgaagaattttataataatttacgaCCAAGTGAATCGAATAGAAGCATGCTGCCTACCCATACCTACTCCAACAGCATGCAATTCGAAGAAACTACTTCTAATACGTTGCCTACTTTTACATCCAATTTAACCGCTTCGGCTAGAGAGTTTATTCCCAGCTCAAGTACTTTACCAGTAAATTTGGTTCAAGATAATAGAAGTAAAAATGGCGCTGTGAGGAAAACAACATATTGGAACAATAAAGATAATTGGTATAGAAATACCAACAACTCGCAATTTCCTTCGAATTCCAAGTCAAACGAGGGTGGGTTTGAGAGAAATAGAAATAGGAATGGACCCAACTCAACCAACAGATTTAAAAATGGTGAACAACGCTTTCGGTCCGGTGGTGCTAGTGAATCCAGTAGAAGTGTAAATAACGACCAATCTTTTAGCAATAACATTGACAATAACGAAAGTGTAAGCAGTAAAAGTTACTTTAATAGCAATAAAAGAGATTATAATAGAGGCAGGAAAAATTTTGATCACGAACAAGAGCAGAGAACCACCCAGAAATTTTGGAACAGACGCGAAAATGTTCCTCATTCTCAAGATTTtagaaattacaataataagaAAGTATATCCCAGACGAAATGACGATGAGGTTGAACCACCTTTTAATAGTAATAGAAAAGTTTATCCAAGGAGGAACGAAGAGGAAACAGAACCGTCTATTAATAGTAGGAAATCTTACCTCAGGAGAAACGAAGAAGACATTGAACCATCTTTCAACAGTAGAAAAGCTTACACTCGACGTAACGAAGAAGAATCTGAACCGCTTTTTAATAGTAAGAAATCTTATCCTAGAAGGAATGAAGAAGAAACTGAACCACCTTTTTATGGACACAATCGCAGAAGAAACGATTACCATGACGGTTATAAGAAACGAAACGGTTATAACAAACTTGAAACTGCATGtgaaaatcgaataaaatctTCTTTGGAAAGTAAGaggaatttagaaaaaaattTGGATTCCGCATCACAAAGAGAGAGACTTCAACAGTTAATCCAGTGCTCCCAACTTGAATGCTTGGTTTGTTGCGAAAAATTGCGAAATACTGATAAGACCTGGTGTTGCAAACAGTGTTTCCATATCCTACATTTGCAGTGCACGAAAAAATGGGCCAACTCCTCGAAATTAGAGACAGGTTGGAGATGCCCAGCCTGCCAAAATGTTTACGAAGAAGTACCGACTAAGTATATGTGCTACTGTAACAAAGTTACAAATCCACCTATGGATCCAAGTGAAATTCCTCACAGTTGTGGACAAGTGTGTGGTCGTTTAGGACGAAGTGGATGTCTTCATAAGTGTACTTTAGTGTGTCACCCGGGTCCTTGTCCCGATTGTTCTGTGATGACTTCTCGTTCCTGTGGATGTGGTGCCACAAAACCACTCATAAAGTGTAGTTCTACCGTTCCAATTACTTGTGGAAATATTTGTGGTAAAGAATTGGCCTGTACATTCCACACTTGTGAAAAAAAATGTCACGAAGGTGAATGTGATGATTGCGATGTGGATTTAGAACAAGAGTGTTACTGTGGAAAAGAACAACGTACACTAAAGTGTTCAGAAGAAGTTAAAGGTTCTAAACTGTACGAATGTGAAAATGTGTGTGATAAGATGTTATTTTGTGGGAATCATAAATGCGAACGTAAGTGCCACAAGGGTTTGTGTGATCCGTGCTCTTTAGCACCTGAAAATATTAAGCAATGCCCTTGTGGTCAAACCAAACTTGTGGAAGAAAGAAAATCTTGTTTGGATCCAATTGCTTGCTGTGATAAAATTTGTAGTAAACTTTTGCAATGTGGTGAACCCAACGTACATCAATGTCAAGTTCCTTGTCATCATGGTCCTTGCCCACCGTGTCCACTTACAACAACTGTGGTGTGTCGTTGTTCATCTATAGAAAAAGATTTACCTTGTTTAACTCTCGAAACAAATGGAATTGATTTACGTTGTGAAAAGAAATGCACAAAGaaacGCTCTTGTGGAAAACATAAGTGTAATCAATTGTGCTGCATAGATATTGATCACATTTGTCCATTACCATGTAATCGTACTCTTACTTGTGGTCAACATAAATGTGAACAAACATGTCACAAAGGCCACTGCCAACCATGTTGGCATACAAGCTTTGATGAATTGTATTGCGAATGTGgatttagtgtaatttatcCACCCGTATCATGTGGTACTCGACCTCCACCATGTAAACAACCCTGTTCGAGACCTCGTTCTTGTGATCACGATGTATTCCATAATTGCCACACCGGTTCTTGTCCTCCATGCACAATTCTTTGTACACGTTGGTGTTACGGCAAACATGAACAGCGTTCAACAATTCAATGTCATCAAGAGAGTTTTAGTTGTGGATATGCATGTGGATTAGATATGCCTTGTGGAAAGCACAAATGTAATCAACCGTGCCACGTTGGACCTTGCAAAGCAACTTGCAGTCAACCATGTTTAGAACCAAGACCCGTATGTGGACATCAATGTAATCTACCGTGCCATGTGCCACCTTGTCGCGAGTCCGTTTGTAAACAAATAGTAACGGTTACCTGTCAATGTGGTCACCGAAAGAGTACTCGTGTTTGTAATGACCTTGCTGCCGAGTACCAGAACATTGCGATGGCACAACTTGTATCCACCATGGAAGAAATGCAAATGGGACGTACAATCGACGTTGCTGCATCAATGAATAAACAACCACAGGGTGGAGTTATGAAAGTGTTGGAATGTACTGAAGAGTGTCGTGTAATTGAAAGAAACAGAAGATTAGCAATTGGTTTACAAATACGTAATCCGGATTTAAGTGCCAAGTTAGCACCTCGTTATTCTGATTTTATGCGAGGTTGGGCAAAACGTGATCCAAAATTTTGTCAACATATACATGACAAATTGTCAGAATTGGTTAAATTGGCAAAACAGAGTAAACAGAAGAGTCGTTCCTACTCCTTCGAAACTATGAATAAAGATAAGCGTCATTTTGTTCACGAGTATTGTGAACATTTTGGTTGTGATAGTGCAGCCTATGATCCAGAACCAAATCGAAACGTGGTGGCGACAGCACTTAAAGAAAAGTCGTGGTTGCCTAGTTATAGTTTAGCAGAGATTATTCAAAGAGAAAATGGTCATCGAAAAGTACCGGGACCACACCAACTTGGAAAGGTATCCACTTCTAGATCATCAGAAAcggttagtttgaaattacctgGGCGGATGCCTAGACCAACTACTCCACCCGGTGAATATGTAGAGTATTTAAATCCAACTAGTTAA
Protein Sequence: MEFFDSNFVEANRWTEEFYNNLRPSESNRSMLPTHTYSNSMQFEETTSNTLPTFTSNLTASAREFIPSSSTLPVNLVQDNRSKNGAVRKTTYWNNKDNWYRNTNNSQFPSNSKSNEGGFERNRNRNGPNSTNRFKNGEQRFRSGGASESSRSVNNDQSFSNNIDNNESVSSKSYFNSNKRDYNRGRKNFDHEQEQRTTQKFWNRRENVPHSQDFRNYNNKKVYPRRNDDEVEPPFNSNRKVYPRRNEEETEPSINSRKSYLRRNEEDIEPSFNSRKAYTRRNEEESEPLFNSKKSYPRRNEEETEPPFYGHNRRRNDYHDGYKKRNGYNKLETACENRIKSSLESKRNLEKNLDSASQRERLQQLIQCSQLECLVCCEKLRNTDKTWCCKQCFHILHLQCTKKWANSSKLETGWRCPACQNVYEEVPTKYMCYCNKVTNPPMDPSEIPHSCGQVCGRLGRSGCLHKCTLVCHPGPCPDCSVMTSRSCGCGATKPLIKCSSTVPITCGNICGKELACTFHTCEKKCHEGECDDCDVDLEQECYCGKEQRTLKCSEEVKGSKLYECENVCDKMLFCGNHKCERKCHKGLCDPCSLAPENIKQCPCGQTKLVEERKSCLDPIACCDKICSKLLQCGEPNVHQCQVPCHHGPCPPCPLTTTVVCRCSSIEKDLPCLTLETNGIDLRCEKKCTKKRSCGKHKCNQLCCIDIDHICPLPCNRTLTCGQHKCEQTCHKGHCQPCWHTSFDELYCECGFSVIYPPVSCGTRPPPCKQPCSRPRSCDHDVFHNCHTGSCPPCTILCTRWCYGKHEQRSTIQCHQESFSCGYACGLDMPCGKHKCNQPCHVGPCKATCSQPCLEPRPVCGHQCNLPCHVPPCRESVCKQIVTVTCQCGHRKSTRVCNDLAAEYQNIAMAQLVSTMEEMQMGRTIDVAASMNKQPQGGVMKVLECTEECRVIERNRRLAIGLQIRNPDLSAKLAPRYSDFMRGWAKRDPKFCQHIHDKLSELVKLAKQSKQKSRSYSFETMNKDKRHFVHEYCEHFGCDSAAYDPEPNRNVVATALKEKSWLPSYSLAEIIQRENGHRKVPGPHQLGKVSTSRSSETVSLKLPGRMPRPTTPPGEYVEYLNPTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00272136;
90% Identity: iTF_01293246;
80% Identity: -