Basic Information

Insect: Rhagonycha fulva
Gene Symbol: stc
Assembly: GCA_905340355.1
Location: HG996555.1:25424790-25433878[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 3.3e+04 -4.2 1.6 15 19 416 420 415 420 0.81

2 15 0.066 1.1e+03 0.6 0.2 4 10 449 455 448 456 0.96

3 15 1.3e-06 0.021 15.7 13.1 4 19 465 480 462 480 0.93

4 15 3.7e-07 0.006 17.4 10.1 3 18 518 533 516 534 0.90

5 15 1 1.7e+04 -3.2 1.2 6 10 564 568 563 568 0.90

6 15 2.6e-09 4.4e-05 24.3 12.1 1 19 574 592 574 592 0.97

7 15 2 3.3e+04 -4.5 1.3 6 10 622 626 622 626 0.96

8 15 4.1e-06 0.068 14.1 19.2 1 19 632 653 632 653 0.87

9 15 1.4 2.3e+04 -3.6 2.0 5 10 682 687 682 687 0.93

10 15 0.0028 46 5.0 11.0 1 11 693 703 693 715 0.91

11 15 1.2e-09 1.9e-05 25.4 17.5 1 19 720 738 720 738 0.98

12 15 1.5 2.4e+04 -3.7 1.9 6 10 767 771 766 772 0.64

13 15 0.00023 3.7 8.5 9.7 10 19 785 794 783 794 0.93

14 15 5e-08 0.00083 20.2 15.4 1 19 830 849 830 853 0.89

15 15 0.002 34 5.4 10.9 1 16 859 873 859 878 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	3.3e+04	-4.2	1.6	15	19	416	420	415	420	0.81
2	15	0.066	1.1e+03	0.6	0.2	4	10	449	455	448	456	0.96
3	15	1.3e-06	0.021	15.7	13.1	4	19	465	480	462	480	0.93
4	15	3.7e-07	0.006	17.4	10.1	3	18	518	533	516	534	0.90
5	15	1	1.7e+04	-3.2	1.2	6	10	564	568	563	568	0.90
6	15	2.6e-09	4.4e-05	24.3	12.1	1	19	574	592	574	592	0.97
7	15	2	3.3e+04	-4.5	1.3	6	10	622	626	622	626	0.96
8	15	4.1e-06	0.068	14.1	19.2	1	19	632	653	632	653	0.87
9	15	1.4	2.3e+04	-3.6	2.0	5	10	682	687	682	687	0.93
10	15	0.0028	46	5.0	11.0	1	11	693	703	693	715	0.91
11	15	1.2e-09	1.9e-05	25.4	17.5	1	19	720	738	720	738	0.98
12	15	1.5	2.4e+04	-3.7	1.9	6	10	767	771	766	772	0.64
13	15	0.00023	3.7	8.5	9.7	10	19	785	794	783	794	0.93
14	15	5e-08	0.00083	20.2	15.4	1	19	830	849	830	853	0.89
15	15	0.002	34	5.4	10.9	1	16	859	873	859	878	0.89

Sequence Information

Coding Sequence: ATGGAATCTTTTGATTCGAATTTTGTAGAAGCTAATAGGTGGACTGAAGAATTTTATAATAATTTACGACCAAGTGAATCAAATCGAAGCATGCTGCCTACCCATACCTACTCCAACAGCATGCAATTCGAAGAAACTACTTCTAATACGGTGCCTACTTTTACATCCAATTTAACCGCTTCCGCTAGAGAGTTTATTCCCAGTTCAAGCACTTTACCAGCAAATTTGGTTCAAGATAATAGAAGTAAAAATGGCGCTGTGAGGAAAACAACATATTGGAACAATAAAGATAATTGGTATAGAAATACCAACAACTCGCAATTTCCATCGAATTCCAAATCAAACGAGGGTGGATTTGAGAGAAATAGAAATAGGAATGGACCCAACTCTGCCAACAGATTTAAAAATGGCGAACAACGCTTTCGGTCCGGTGGTGCTAGTGAATCCAGTAGAAGTGTAAATAACGACCAATCTTTTAGCAATAACATTGACAATAACGAAAGTGTAAGCAGTAAAAGTTACTTTAATAGCAATAAAAGAGATTTCAATAGAGGCAGGAAAAATTTCGATCACGAACAAGAGCAGAGAACCACCCAGAAATTTTGGAACAGGCGCGAAAATGTTCCTCATTCTCAAGATTTTAGAAATTATAACAATAAGAAAGTATATCCCAGACGAAATGACGATGAGGTTGAACCACCTTTTAATAGTAATAGAAAAGTTTATCCAAGGAGGAACGAAGAGGAAACGGAACCGTCTAGTAATAGTAGGAAATCTTACCTCAGAAGGAATGAAGAAGATATTGAATCATCTTTCAACAGTAGAAAAGTTTACACTCGACGTAACGACGAAGAATCTGAACCGCTTTTTAATAGTAAGAAATCTTATCCTAGAAGGAACGAAGAAGAAACTGAGCCACCTTTCTATGGACACAATCGCAGAAGAAACGATTACCATGACGGTTATAAGAAACGAAATGGATACAACAAAATTGAAACTGCATGTGAAAATCGAATAAAATCATCTTTGGAAAGTAAGAGGAAGTTGGAAAAAAATTTGGATTCTGCATCACAAAGAGAGAGACTTCAACAATTAATCCAGTGCTCCCAACTTGAATGCTTGGTTTGTTGCGAAAAATTGCGAAATACGGATAAGACCTGGTGCTGCAAGCAGTGTTTCCATATCCTACATTTGCAGTGCACGAAAAAGTGGGCCAACTCCTCAAAATTAGAGACCGGTTGGAGATGCCCAGCCTGCCAAAATGTTTACGAAGAAGTACCAACTAAGTATATGTGCTACTGTAACAAAGTTACAAATCCACCTATGGATCCAAGTGAAACTCCTCACAGTTGTGGACAAGTGTGTGGTCGTTTAGGACGAAGTGGATGTCTTCATAAGTGTACTTTAGTGTGTCATCCGGGTCCTTGTCCCGATTGTTCTGTGATGACTTCTCGTTCCTGCGGATGTGGTGCCACAAAACCACTCATAAAGTGTAGTTCTACCGTTCCAATTACTTGTGGAAATATTTGTGGTAAAGAGTTGGCCTGTACATTCCACACTTGTGAAAAAAAATGTCACGAAGGTGAATGTGACGATTGCGATGTGGATTTAGAACAAGAATGTTACTGTGGAAAAGAACAACGTACACTAAAGTGTTCAGAAGAAGTTAAAGGTTCTAAACTGTACGAATGTGAAAATGTGTGTGATAAGATGTTATCTTGTAGCAATCATAAATGCGAACGTAAGTGCCACAAGGGTTTGTGTGATCCGTGCTCTTTAGCACCTGAAAATATTAAGGAGTGCCCTTGTGGTCAAACAAAACTTGTGGAAGAAAGAAAATCTTGTTTGGATCCAATTGCTTGCTGTGAAAAAATCTGTAGTAAACTTTTACAATGTGGTGAACCCAACGTACATCAATGTCAAGTTCCTTGTCATCATGGTCCTTGCCCACCATGTCCACTTACAACAACTGTGGTGTGTCGTTGTTCATCTATAGAAAAAGATTTACTTTGTTCTACTCTCGAAACAAATGGAATTGATTTACGTTGTGAGAAGAAATGCACAAAAAAACGCTCGTGTGGAAAACATAAGTGTAATCAATTGTGCTGCATAGATATTGATCACATTTGTCCGTTACCATGTAATCGTACCCTTACTTGTGGTCAACATAAATGTGAACAAACATGTCACAAAGGCCACTGCCAACCATGTTGGCATACAAGCTTTGATGAATTGTACTGTGAATGTGGATTTAGTGTAATTTATCCACCCGTATCATGTGGTACTCGACCTCCACCATGTAAGCAACCCTGTTCGAGACCTCGTTCTTGTGATCACGATGTATTCCATAATTGCCACACCGGTCCTTGTCCTCCATGCACAATTCTTTGTACACGTTGGTGTTATGGCAAGCATGAACAACGTTCGACAATTCAATGTCATCAAGAGAGTTTTAGTTGTGGATATGCATGCGGATTAGATATGCCTTGTGGAAAGCATAAGTGTAATCAACCTTGCCACGTTGGACCTTGCAAAGCAACTTGCAGTCAACCATGTTTGGAACCAAGACCCATATGTGGACATTCATGTAATCTACCGTGCCATGCGCCACCTTGTCGCGAGTCCATTTGTAAACAGGTAGTAACGGTTACCTGTCAATGTGGTCACCGAAAGAGTACTCGTGTTTGTAACGAGCTTGCTGCCGAGTACCAAAACATTGCGATGGCACAACTTGTATCCACCATGGAAGAAATGCAAATGGGACGAACAATCGACGTTGCTGCATCAATGAACAAACAACCACAAGGTGGAGTTATGAAAGTGTTGGAATGTACTGAAGAGTGTCGTGTAATCGAAAGAAACAGAAGATTAGCAATTGGTTTACAAATACGTAATCCGGATTTAAGTGCCAAATTAGCACCTCGTTATTCTGATTTTATGCGAGGTTGGGCAAAACGTGATCCAAAATTTTGTCAACATATACATGACAAGTTGTCAGAATTGGTTAAATTGGCAAAACAGAGTAAACAGAAGAGTCGTTCCTACTCCTTCGAAACCATGAATAAAGATAAGCGTCATTTTGTTCACGAGTATTGTGAACATTTTGGTTGCGATAGTGCAGCCTATGATCCAGAACCGAATCGAAACGTGGTAGCGACAGCACTTAAAGATAAGTCTTGGTTGCCCAGTTATAGTTTAGCAGAGATTATTCAAAGAGAAAATGGTCATCGAAAAGTACCGGGACCACACCAACTTGGAAAGGTATCCACTTCTAGATCATCGGAAACGGTTAGTTTGAAGTTACCAGGACGGATGCCTAGACCAACTACTCCACCCGGTGAATATGTAGAGTATTTAAATCCAACTAGTTAA
Protein Sequence: MESFDSNFVEANRWTEEFYNNLRPSESNRSMLPTHTYSNSMQFEETTSNTVPTFTSNLTASAREFIPSSSTLPANLVQDNRSKNGAVRKTTYWNNKDNWYRNTNNSQFPSNSKSNEGGFERNRNRNGPNSANRFKNGEQRFRSGGASESSRSVNNDQSFSNNIDNNESVSSKSYFNSNKRDFNRGRKNFDHEQEQRTTQKFWNRRENVPHSQDFRNYNNKKVYPRRNDDEVEPPFNSNRKVYPRRNEEETEPSSNSRKSYLRRNEEDIESSFNSRKVYTRRNDEESEPLFNSKKSYPRRNEEETEPPFYGHNRRRNDYHDGYKKRNGYNKIETACENRIKSSLESKRKLEKNLDSASQRERLQQLIQCSQLECLVCCEKLRNTDKTWCCKQCFHILHLQCTKKWANSSKLETGWRCPACQNVYEEVPTKYMCYCNKVTNPPMDPSETPHSCGQVCGRLGRSGCLHKCTLVCHPGPCPDCSVMTSRSCGCGATKPLIKCSSTVPITCGNICGKELACTFHTCEKKCHEGECDDCDVDLEQECYCGKEQRTLKCSEEVKGSKLYECENVCDKMLSCSNHKCERKCHKGLCDPCSLAPENIKECPCGQTKLVEERKSCLDPIACCEKICSKLLQCGEPNVHQCQVPCHHGPCPPCPLTTTVVCRCSSIEKDLLCSTLETNGIDLRCEKKCTKKRSCGKHKCNQLCCIDIDHICPLPCNRTLTCGQHKCEQTCHKGHCQPCWHTSFDELYCECGFSVIYPPVSCGTRPPPCKQPCSRPRSCDHDVFHNCHTGPCPPCTILCTRWCYGKHEQRSTIQCHQESFSCGYACGLDMPCGKHKCNQPCHVGPCKATCSQPCLEPRPICGHSCNLPCHAPPCRESICKQVVTVTCQCGHRKSTRVCNELAAEYQNIAMAQLVSTMEEMQMGRTIDVAASMNKQPQGGVMKVLECTEECRVIERNRRLAIGLQIRNPDLSAKLAPRYSDFMRGWAKRDPKFCQHIHDKLSELVKLAKQSKQKSRSYSFETMNKDKRHFVHEYCEHFGCDSAAYDPEPNRNVVATALKDKSWLPSYSLAEIIQRENGHRKVPGPHQLGKVSTSRSSETVSLKLPGRMPRPTTPPGEYVEYLNPTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00272136;
90% Identity: iTF_01294647; iTF_00270727; iTF_00269427; iTF_00272136; iTF_00273293; iTF_00928343;
80% Identity: -