Rlut007010.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- pnr
- Assembly
- GCA_958510855.1
- Location
- OY294036.1:91662229-91668296[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-17 8.6e-14 51.8 2.4 1 35 327 360 327 361 0.97 2 2 1.3e-18 6.7e-15 55.4 5.7 1 35 383 416 383 417 0.98
Sequence Information
- Coding Sequence
- ATGGAAGAGCCACAAGATAAAGAGCCATATTATGATGAAATTAAAGTTAAAGTGGAAAATAAACAAGCATTAAATTCATCAGAAGTGGAAAAGAATATGTCGTCGGTGATAATCCGGCGACAAGTGATTACCACCGCAGGAACCATAGAACAACCGACCGAGGAACCAAAAATTGAACAAGTTGCTGCCGAAGAGGTTGTCAAAACATCCACGTCAACTCCACTTAATGGAAGTCCCCAAGAACCATCATCAGTTGCGTCTCAAGATATTCAGCAATACGAGGAACATTCCACACTTGCGGAAGTGCAATACGAAGTAGAACCACAGCACTTTTCGGAACAAGGTGTAGTTTCTACCGAACAATATTCCGCAACGAATCATGAATATTCACAAGAACAACCTATAGAATACACGACGACAATTGAAACGGCAAATATACAGGGTTCAGTTCCTCACATTCAAATTGATGGTGTTCAGTTTAGTGAATCGCCCGAAGATATCAAAGTTAGTGTAAAATACACCGATTTGGATTCGGTTCCTTCTGCCCAATATCAAACAACACATTTTTCTGCCGATGGAAACCAGTACATACATCAACCACAGTACCAACAGTATCAAAGTTTTGGAATCGCACAAGGACCAGACGATAGTCCACCCAATTCGGTGTTGTACAAAAGCAGCGATCCAAATTTAAGCTCTTCTAGAATTTATCACCAGaGTTATGAAGTACAAAACTCTCAATCGTCGAACAACCATGTAACTCTTATAGGCCATAGCGGAAACAGTTATCAGTATTCCGTTTCTGCAAATCCTGCATGGACACCTACGACTGTGAACTCGTCCGAGTATTCTACATATCCTAGTTTGCAAGGAGGATCCGAAGGCATCGCATACCAAAATTTTCCTGGAAATTCGGCAACGTGGACGCAAATTGAAGATGGGTACGAAGCACCAATTCAGGATGTTGACATTAAGGAGTGTGTTAATTGTGGAGCAAGTATAACACCGCTTTGGAGACGGGATGGAACTGGACATTATTTGTGTAATGCCTGTGGACTGTATAACAGAATTAATGGAGTTAATCGACCTCCCGTACGTACTACCAAAAAACCACCAACGAATGGAAATCGACGTAGTGGTGTATCATGTGCCAATTGCCAAACCAGAACGACTACTTTATGGAGGCGAAATAATCAAGGCGAGCCTGTTTGCAACGCTTGTGGATTATACTTCAAATTACATGGGGTGAATAGACCGTTGACAATGAAGAAAGATGGTATTCAAACACGAAAGAGGAAACCGAAAAGTGGAGGGTCAATTTCTTCAGGTGGATCAGGATTGGGATTGCAATCACGGACCATGATGATCCATAATCCGATGTATCAAAACAGCATACAAGATTTACCACCTCCTCCAGATCAGTATCAGTTTCCTCTTACGTTACCACAAAATATACAAACTATACGGTTGCCAAGCGCAGATCACTTAAGTCGACAAACAATTTCCAActTACCCGCTTTGGAACCAGTCATGATCCCTCGCACTGTCGATGAACAAGCCACTGTCATTACATCAACTTCTGCAGCTAACGATTTACAAcgttcataa
- Protein Sequence
- MEEPQDKEPYYDEIKVKVENKQALNSSEVEKNMSSVIIRRQVITTAGTIEQPTEEPKIEQVAAEEVVKTSTSTPLNGSPQEPSSVASQDIQQYEEHSTLAEVQYEVEPQHFSEQGVVSTEQYSATNHEYSQEQPIEYTTTIETANIQGSVPHIQIDGVQFSESPEDIKVSVKYTDLDSVPSAQYQTTHFSADGNQYIHQPQYQQYQSFGIAQGPDDSPPNSVLYKSSDPNLSSSRIYHQSYEVQNSQSSNNHVTLIGHSGNSYQYSVSANPAWTPTTVNSSEYSTYPSLQGGSEGIAYQNFPGNSATWTQIEDGYEAPIQDVDIKECVNCGASITPLWRRDGTGHYLCNACGLYNRINGVNRPPVRTTKKPPTNGNRRSGVSCANCQTRTTTLWRRNNQGEPVCNACGLYFKLHGVNRPLTMKKDGIQTRKRKPKSGGSISSGGSGLGLQSRTMMIHNPMYQNSIQDLPPPPDQYQFPLTLPQNIQTIRLPSADHLSRQTISNLPALEPVMIPRTVDEQATVITSTSAANDLQRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00273279;
- 90% Identity
- iTF_00928332;
- 80% Identity
- -