Lyun020110.2
Basic Information
- Insect
- Lycocerus yunnanus
- Gene Symbol
- pnr
- Assembly
- GCA_036346125.1
- Location
- JARFIX010000045.1:1383887-1389740[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 1e-13 51.8 2.4 1 35 328 361 328 362 0.97 2 2 1.5e-18 7.9e-15 55.4 5.7 1 35 384 417 384 418 0.98
Sequence Information
- Coding Sequence
- ATGGAAGAGCCACAAGATAAAGAAACTTATTTTGATGATATTAAAGTTAAAGTGGAACATAAACAAGCACTAAATTCATCAGAAGCGGAACCCAATAATATGTCGTCGGTGATAATTAGGCGACAAGTAATTACCACTGCAGGAACCATAGAACAACCGCCCCCGGAACCGAAAATTGAACAAGTTGTGGCCGAAGAAGTTGTGAAAACATCGACGTCAACTCCTCTTAATGGAAGTCCCCAGGAGCCATCTCCGGTAGCAGCTCAAGAAATTCAGCAATACGAGGAACATTCCAATTTGGCGGAGGTGCAATACGAAGTGGAACCGCAGCACTTTTCAGAACAAGGTGTAGTTGCGACAGAACAATATTCGACAACGAATCAAGAATATTCGCAAGAGCAACCTATAGAATACACGACGACAATTGAAACAGCAAATATACAGGGTTCAGTTCCTCATATTCAAATCGAAGGTGTTCAGTTTAGTGAATCGCACGACGATGTTAAAGTTAGTGTGAAATACACAGATTTGGATTCGGTTCCTTCTGCACAATACCAAACATCTCATTTCGCTGCGGACGGAAATCAGTACATACATCAACCACAGTACCAACAATATCAAAGTTTTGGAATTGCACAAGGACCAGACGACAGTCCACCTAATTCGGTACTATACAAAGGCGATCCAAATTTAGGTTCTTCTAGAATTTATCAGAGTTATGAGGTGCAAAACTCCCAATCGTCAAACAACCATGTAACCCTTATTGGTCATAGTGGAAATAGTTATCAGTATTCTGTTTCTGCAAATCCAACATGGACACCCACCACTGCTAACTCATCGGAGTATACCACATATTCTGGTTTGCAAGCTGGATCCGAGAGCATTGCATATCAAAATTTTCCTGGAAACTCTGCCACGTGGACGCAAATTGAAGATGGGTACGAAGCTGGAACACCGATACAGGATGTGGACATAAAGGAGTGTGTTAATTGCGGAGCAAGCATAACGCCTCTTTGGCGACGAGATGGTACCGGACATTATTTGTGCAATGCCTGTGGACTATACAATAGGATTAATGGTGTTAATCGACCTCCTGTACGTACAACCAAAAAACCACCAACGAATGGAAATCGACGAAGTGGTGTATCATGTGCCAATTGCCAAACGAGAACGACTACTTTATGGAGACGAAATAATCAAGGCGAGCCTGTTTGTAACGCGTGTGGATTATACTTCAAATTACATGGGgtgAATAGGCCACTGACGATGAAGAAAGATGGCATTCAAACACGAAAAAGGAAACCGAAAAGTGGTGGACCAATTTCATCAGGAGGATCGGGCTTGGGATTGCAATCCCCACGGACCATGATGATTCATAATTCGATGTATCAAAATAGCATACAAGATTTACCACCTCCTCCAGATCAGTATCAGTTTCCTCTTACATTACCACAAAATATCCAAACAATACGATTGCCAAGCGCAGATCATTTAAGTCGACAAACGATATCTAAtttgccCCCTTTGGAACCAGTCATGATACCCCGTACTGTCGATGAACAAGCCACTGTTATTACATCAACATCTGCAGCTAACGATTTACAACGTtcgtaa
- Protein Sequence
- MEEPQDKETYFDDIKVKVEHKQALNSSEAEPNNMSSVIIRRQVITTAGTIEQPPPEPKIEQVVAEEVVKTSTSTPLNGSPQEPSPVAAQEIQQYEEHSNLAEVQYEVEPQHFSEQGVVATEQYSTTNQEYSQEQPIEYTTTIETANIQGSVPHIQIEGVQFSESHDDVKVSVKYTDLDSVPSAQYQTSHFAADGNQYIHQPQYQQYQSFGIAQGPDDSPPNSVLYKGDPNLGSSRIYQSYEVQNSQSSNNHVTLIGHSGNSYQYSVSANPTWTPTTANSSEYTTYSGLQAGSESIAYQNFPGNSATWTQIEDGYEAGTPIQDVDIKECVNCGASITPLWRRDGTGHYLCNACGLYNRINGVNRPPVRTTKKPPTNGNRRSGVSCANCQTRTTTLWRRNNQGEPVCNACGLYFKLHGVNRPLTMKKDGIQTRKRKPKSGGPISSGGSGLGLQSPRTMMIHNSMYQNSIQDLPPPPDQYQFPLTLPQNIQTIRLPSADHLSRQTISNLPPLEPVMIPRTVDEQATVITSTSAANDLQRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00273279;
- 90% Identity
- iTF_00269412; iTF_00272119; iTF_00273279; iTF_01294633; iTF_00270714;
- 80% Identity
- -