Rlut007009.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- gata5-a
- Assembly
- GCA_958510855.1
- Location
- OY294036.1:91616362-91641364[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4e-18 2.8e-14 53.4 2.7 1 34 324 356 324 358 0.97 2 2 9.4e-19 4.9e-15 55.8 4.4 1 35 378 411 378 412 0.98
Sequence Information
- Coding Sequence
- ATGACGCAAATCATCTCGTTGGTCCATGCTGGTTATCGGTCAGCCCCAGGAAGTCCGGTGCCTGTTCACCAGGATAACATGGCAGTTGATGGCTACACCGAGGATGTTTCCCAGTACAGTCCCGCCTCAAGACAAGAAGGGGCAGATCTTTCTCCCCATTCTAGGGCCACCACGCCTATCGAATGCATTTCGTACAGTGCGGAAGCCCAGCAGCAGGAGAATTATTCTACGGCAATGCGTGCCGATGGAGAATATGTTTTATTCAATCGCATCGACGAGGTACACCTAGAGGAACAAGGTGCTCAATATTTGCAATTAGACTCCGTTCCAGGAGTCACGACAACTTCACCAAACGGTAGCACCACATCCAATTCGGGGTCTCCTAGGAGAGTAGCGTTCACACATCTCCACTCCATCTCGTCTAATGACCAAGACCACTTAGCCAGTCCGCAACTTACTCAATTATCTAATCACATTAGTTACTCGGGAAATATCGATTGTGTTACATCAGGAAATATTTCAAGcTCCTTGTATTCGTCGGCTGTGGGCACTTACTCGGGCGGAGCAATGCCTTTCTACAGTACCGGATCACCTGAAATGGTGTCTCCACCATCATCACAGTTATGGACAAACTCTGGTGTAAACACATCATCGGGTATGCCGCTGTCGGATGATTATTCTAAAGGATCACCGTCTGGTCCGGGATCTGGAAGCAGTCTTCCGGCTTTTAATCGAATTCCTGCCTTCCACACCAGCACTCCAAATCACAGAAGTGCACCGTACTCCATTCCTCCAAGAACGGTGTATTCGGATTGGCAATATTCCGATTCTCCTAGCAGTTTACAGTACAGCCTCATGACACCTCAAAATAATCGTAACCGTCCACCACCTGTATCGGGACTCTCGGCAGCAGCTTCATTATCTGCAATAGATCCAAGAGCTGCGGAATATTTTACTGAAGGAAGAGAGTGCGTCAATTGTGGTGCTATCGATACACCTCTTTGGCGTCGTGACGGCACCGGACATTATCTATGTAATGCTTGCGGCCTTTACCACAAGATGAATGGCATGAATAGACCACTAGTAAAACAGCCTCGTAGAttgtctGCTTCACGACGCGTTGGGTTAACTTGCACCAATTGTCACACCAGCACCACTTCCTTGTGGAGAAGGAATTCTCTCGGGGAACCAGTTTGCAATGCATGCGGATTGTACTTTAAGCTACATGGAGTTAACAGGCCCATGGCTATGAAAAAAGATAGCATACAGACAAGAAAACGTAAGCCAAAAGGTGCTAAGGATAGCTCGGGAAACGGTAACGGCTTATCATCATCCCTTCCCATCAGTAACGGAAGCATCAAGATGGAACACAATTTACCTAGCATTAAGTTAGAACACAATCTACCTAGCATAAAATTAGAACACGGATCATTAGATAATTATGGTGATTTGAGAACGATGTCGTCGATGAGTCACCTGCAGCACAGTTCACCATCCAACAGCTACGTGTACAATGGTAATGCTGCTCAGAGGTTATCTCCATACGAATCTCAACATTCTCCTCAATTGAGTACTTACTACGAAATGTTACAACATAACAACTCTACCCCAAGCTCACCATCAACCACACCTAGTCCAAATGCTCCCCACATTGTTGCCAATAATTCAGTTAATACCTCTAAAATAATCATGAATGGTGATCAACATGTCGATAGGCCTTCAGTGGTATCGTCATTGTCTTCTTAA
- Protein Sequence
- MTQIISLVHAGYRSAPGSPVPVHQDNMAVDGYTEDVSQYSPASRQEGADLSPHSRATTPIECISYSAEAQQQENYSTAMRADGEYVLFNRIDEVHLEEQGAQYLQLDSVPGVTTTSPNGSTTSNSGSPRRVAFTHLHSISSNDQDHLASPQLTQLSNHISYSGNIDCVTSGNISSSLYSSAVGTYSGGAMPFYSTGSPEMVSPPSSQLWTNSGVNTSSGMPLSDDYSKGSPSGPGSGSSLPAFNRIPAFHTSTPNHRSAPYSIPPRTVYSDWQYSDSPSSLQYSLMTPQNNRNRPPPVSGLSAAASLSAIDPRAAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCHTSTTSLWRRNSLGEPVCNACGLYFKLHGVNRPMAMKKDSIQTRKRKPKGAKDSSGNGNGLSSSLPISNGSIKMEHNLPSIKLEHNLPSIKLEHGSLDNYGDLRTMSSMSHLQHSSPSNSYVYNGNAAQRLSPYESQHSPQLSTYYEMLQHNNSTPSSPSTTPSPNAPHIVANNSVNTSKIIMNGDQHVDRPSVVSSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00928331;
- 90% Identity
- iTF_01293232;
- 80% Identity
- -