Lyun020109.1
Basic Information
- Insect
- Lycocerus yunnanus
- Gene Symbol
- gata5-a
- Assembly
- GCA_036346125.1
- Location
- JARFIX010000045.1:1333213-1366675[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-18 3.3e-14 53.4 2.7 1 34 317 349 317 351 0.97 2 2 1.1e-18 5.7e-15 55.8 4.4 1 35 371 404 371 405 0.98
Sequence Information
- Coding Sequence
- ATGGATGTTGATTCTTTTATCGAAAATTTCGTGAACAATCTTAACATAGATTGGGATATAGCTGTTGATGGCTACACCGAGGATGTTTCCCAGTACAGTCCCGCCTCGAGACAAGAAGGGGCAGATCTTTCTCCCCATTCTAGGGCCACCACGCCTATCGAATGTATTTCGTACAGTACGGAAGCACAACAACAAGACAATTATCGCACGGCAATGCGTGCCGATGGAGAATATGTGTTATTCAATCGCATCGATGAGGTACACCTAGAGGAACAAGGTGCTCAATATTTGCAATTAGACTCCGTTCAAGGAGTCACCACAACTTCACCAAACGGTAGTACTACATCGAATTCTGGATCTCCCAGGAGAGTAGCGTTCACACATCTCAACTCCATCTCCTCTAATGACCAAGACCACTTAGCCACTCCGCAACTTATTCAATTATCTAATCACATTAGTTACTCGGGAAATATCGATTGTGTTACATCAGGAAATATTTCAAGctCCTTGTATTCGTCGGCTGTGGGTACTTACTCGGGTGGAGCAATGCCTTTCTACAGTACGGGATCACCTGAAATGGTGTCTCCTCCATCATCACAGTTATGGACTAATTCTGGTGTAAACACATCATCGGGATTACCGCTTACGGATGATTATTCTAAAGGATCGCCGTCTGGACCTGGCTCTGGAAGCAGCCTTCCGGCGTTCAATCGAATTCCAGCTTTCCACACCAGTACTCCAAATCACAGAAGTGCGCCGTACTCTCTTCCTCCAAGAACGGTGTACTCGGATTGGCAATATTCCGAATCTCCTAGCAGTTTACAGTACAGCCTCATGACACCTCAAAATAATCGTAACCGTCCACCACCAGTATCGGGACTATCGGCAGCAGCTTCGTTATCTGCAATAGATCCAAGAGCTGCTGAATATTTTACCGAAGGAAGAGAATGCGTCAATTGTGGTGCTATCGATACACCTCTTTGGCGTCGGGACGGCACCGGACATTATCTATGTAATGCTTGCGGCCTTTACCACAAGATGAATGGCATGAATAGACCACTAGTAAAACAGCCTCGCAGATTGtCGGCTTCACGACGTGTTGGATTAACTTGCACCAATTGTCATACCAGCACCACCTCCTTGTGGAGAAGAAATTCTCTCGGGGAACCTGTTTGCAATGCATGTGGATTGTACTTTAAACTACATGGAGTTAACAGGCCCATGGCTATGAAGAAAGATAGCATACAGACAAGAAAACGTAAGCCAAAAGGTGCCAAGGATAGCTCGGGTGGTGGTAACGGATTGTCGTCATCTCTTCCAATCGCTAACGGAAGCATTAAGATGGAACACAATTTACCTAGCATTAAGTTAGAACATAATCTACCTAGCATAAAATTAGAACACGGATCATTAgataattacGGCGATTTGAGAACGATGACGTCGATGAGTCACCTGCAGCATAGTTCACCATCCAACAGCTACGTGTACAATGGAAATGCTGCTCAGAGGTTATCTCCATACGAATCTCAACATTCTCCTCAATTGAGTACTTATTACGATATGTTACAACATAATTCCACTCCAAGCCCACCATCAACTACGCCTAGTCCAAATTCTCCCCATATTGTTGCCAACAATTCAGTTAATACCTCAAAAATAATCATGAATGGTGATCAACATGTCGACAGGCCTTCGGTGGTGTCATCATTGTCTTCTTAG
- Protein Sequence
- MDVDSFIENFVNNLNIDWDIAVDGYTEDVSQYSPASRQEGADLSPHSRATTPIECISYSTEAQQQDNYRTAMRADGEYVLFNRIDEVHLEEQGAQYLQLDSVQGVTTTSPNGSTTSNSGSPRRVAFTHLNSISSNDQDHLATPQLIQLSNHISYSGNIDCVTSGNISSSLYSSAVGTYSGGAMPFYSTGSPEMVSPPSSQLWTNSGVNTSSGLPLTDDYSKGSPSGPGSGSSLPAFNRIPAFHTSTPNHRSAPYSLPPRTVYSDWQYSESPSSLQYSLMTPQNNRNRPPPVSGLSAAASLSAIDPRAAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCHTSTTSLWRRNSLGEPVCNACGLYFKLHGVNRPMAMKKDSIQTRKRKPKGAKDSSGGGNGLSSSLPIANGSIKMEHNLPSIKLEHNLPSIKLEHGSLDNYGDLRTMTSMSHLQHSSPSNSYVYNGNAAQRLSPYESQHSPQLSTYYDMLQHNSTPSPPSTTPSPNSPHIVANNSVNTSKIIMNGDQHVDRPSVVSSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01294632; iTF_00269411; iTF_00270713; iTF_00273278; iTF_01293232;
- 90% Identity
- iTF_01293232;
- 80% Identity
- -