Rlut000736.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- dsx
- Assembly
- GCA_958510855.1
- Location
- OY294036.1:8159918-8160376[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-24 1.9e-20 73.5 13.4 2 47 25 70 24 70 0.97 2 2 0.84 1e+04 -2.5 0.1 7 16 119 128 117 130 0.69
Sequence Information
- Coding Sequence
- ATGTCGGATAATCAAGATTTCGATTCCAAAATGGAATTAAATGCCTCGAGTACTTCCTCAAATCCGCGCACCCCCCCTAATTGTGCACGTTGTAGGAATCATCGCATGAAAATTGCACTTAAAGGACACAAAAGGTACTGTAAATATCGTTCTTgcgaatgtgaaaagtgtcgatTGACTTCTGAGAGACAACGCGTTATGGCTATGCAAACGGCTTTGCGACGAGCACAGGCTCAGGATGAAGCTATGATGAGAACATCGCAAAACGGTTCTGTAATCAGTCTTCCTGCTAAAAGCCCGTCTCCACTTCAAACAATTGAACGCAGTCTCGATTGCGATTCTTCGGCTTCATCTCAGTGTTCAAATAACGGAAGAAATACAATCAGAAAGATTCCTTCCATCGATGCCACACCGTCCACTACAACTGGAGTTATGGGAACAGTTggtaagtttttttaa
- Protein Sequence
- MSDNQDFDSKMELNASSTSSNPRTPPNCARCRNHRMKIALKGHKRYCKYRSCECEKCRLTSERQRVMAMQTALRRAQAQDEAMMRTSQNGSVISLPAKSPSPLQTIERSLDCDSSASSQCSNNGRNTIRKIPSIDATPSTTTGVMGTVGKFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00268296;
- 90% Identity
- iTF_00269833;
- 80% Identity
- -