Rlut000351.1
Basic Information
- Insect
- Rhagonycha lutea
- Gene Symbol
- TSC22D1
- Assembly
- GCA_958510855.1
- Location
- OY294036.1:3119234-3124504[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2 3.6e+04 -4.8 3.4 46 57 272 283 257 288 0.71 2 2 2.6e-27 4.7e-23 82.1 1.5 1 47 527 573 527 580 0.96
Sequence Information
- Coding Sequence
- ATGATTCCTGGCAGTGTGGATCCACGACGACCAGATAAGGTGCAACGGTACAAGCCAAATGTTTCTACGAATAGCAATGCATCGGGTGAAGATTTGACTCCTGATTACATGAACATTTTAGGTCCAGATTCGACCCGGGGAAATGTACAAGGAGAAGTGAAGATAAACGAGAGTAATATAAATACTGTTGAAGCAAAAAGTGTGGCGATTCAACAGCAGAACGACGAAGCTACAAAATCTACCCAAGAAACGTCCACAACGACAGTTGTAAATAATGCGATACCCACAAGTCCTCAATATGGCGTTACTATAATTTCCACAAATGCAAATAACGACATACCAATAGAAGCTACCACTGCTGCCGTGAATACGATCACAGAATCTGTTACAAAAATTACTGACAACAATAACAGTGAACATAAAGAAATGCATTCGACTCCTAGCAAAAACGATCGCTTCAAGGTCGTGAAAATTGCCAGTTCGGAACCGTTTAGGAGGGGAAGGTGGAAGTGCATGGATTATGTTGACCAGGTCCCACCAACAACAAATCAGCAAGCTAAGACAAACCAAAGCACGGGAGTTACGGGTGTGCAAATTGGAGGTGGTGTTTACATGCAAACGCAAAGTTTACCTCCGCAACAAATTCAACAGTTGTTGCTACAAAGTGCATTGTGCGCCGTACAACCTCaatactttcaaaacaacatgCAATCTCAAATTCTACCACAAACGCAACAGTATTTCTACCCAGCCGCCGTTCAAAACCAAAACAGCCTACAACAACAAATGTTGAATCAATCGGGTGTTGTTCAACCTCAGTTTTTAAATCAACAACAGCAGCAGCAACAACAACAGCAGCAGCAGCAGTATTTCCAAGCGTCGGTGGTACAACCTGGAAACTTCCAAAACGTGCAATTTGTTCAACCGGCGTACCCAAATCAACCCAGTGCTTTTGTTCCCACCACTcaaaacatacaaaattttcaacaagCGCAAACGTACGGCGGCCAGCCCACCGTGACACAGCAGAATGTTGTTCAAAATCAATCCCAACCCGCGTCGGTAACTCAACCGCAACCAATAGTGAACGGTTACGCTTACCCCTCCCAAAACATAACAGAACAACAATTAGCCGCGAACAATTTACCCAACCAAGTTGCCAAAAGTGTGATCATCAATTCAAACCCTAACAATAACCAAGTAATTGTCCAACAAAATCAACAACCCGAATCTCAATCGGTTAATCAAAACTCGGTGGTACGAAATCAAGTGACTGAACAACCGGCAACCAATCAGACTTTTCAACAACATCCCCAAATTTCCATCATTCCAAACGTTAATCCCATGCAAAACGTCGTCGTTCTTCAATCCTACGACCCCCACCAAACCAACGACGTTTACGCCAACCCCCAGTTTGTCGCAAGCGTGCATAGTATACCAATTATGGAAAACACGGATGCTCAAGTCCCCGAAGGCTCAATGGACGTAGTCGTCGCAAATTCGACAGGAGAAAACACGGAAGACCCTAGTAAAACGAACCCCGTGGTGAACGCAATCGATAACAAAATAGAACAAGCAATGGATTTGGTTAAAAGCCACCTGATGTACACGGTACGAGAAGAAGTGGAAGTCTTAAAGGAAAAAATAGCAGAATTAATGGAACGAATTCAACAGTTAGAATCGGAAAATAATTTCTTAAGGTCACAATTGCCTAAAAATAACCCCAATGGTACTTCCGAACCCTCGTCACAACAATAa
- Protein Sequence
- MIPGSVDPRRPDKVQRYKPNVSTNSNASGEDLTPDYMNILGPDSTRGNVQGEVKINESNINTVEAKSVAIQQQNDEATKSTQETSTTTVVNNAIPTSPQYGVTIISTNANNDIPIEATTAAVNTITESVTKITDNNNSEHKEMHSTPSKNDRFKVVKIASSEPFRRGRWKCMDYVDQVPPTTNQQAKTNQSTGVTGVQIGGGVYMQTQSLPPQQIQQLLLQSALCAVQPQYFQNNMQSQILPQTQQYFYPAAVQNQNSLQQQMLNQSGVVQPQFLNQQQQQQQQQQQQQYFQASVVQPGNFQNVQFVQPAYPNQPSAFVPTTQNIQNFQQAQTYGGQPTVTQQNVVQNQSQPASVTQPQPIVNGYAYPSQNITEQQLAANNLPNQVAKSVIINSNPNNNQVIVQQNQQPESQSVNQNSVVRNQVTEQPATNQTFQQHPQISIIPNVNPMQNVVVLQSYDPHQTNDVYANPQFVASVHSIPIMENTDAQVPEGSMDVVVANSTGENTEDPSKTNPVVNAIDNKIEQAMDLVKSHLMYTVREEVEVLKEKIAELMERIQQLESENNFLRSQLPKNNPNGTSEPSSQQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01291228;
- 90% Identity
- iTF_01291228;
- 80% Identity
- -