Rful027883.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Rhagonycha fulva
Gene Symbol
nfxl1
Assembly
GCA_905340355.1
Location
HG996555.1:78284601-78287831[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.1 1.9e+04 -3.3 0.3 14 18 120 124 120 125 0.73
2 20 2 3.3e+04 -5.0 1.9 15 19 164 168 164 168 0.85
3 20 0.13 2.1e+03 -0.3 0.4 4 10 199 205 198 205 0.95
4 20 2.9e-06 0.048 14.6 18.4 1 19 213 230 213 230 0.99
5 20 9.4e-07 0.015 16.1 13.9 3 18 268 283 266 284 0.92
6 20 0.7 1.2e+04 -2.7 1.9 6 10 309 313 308 313 0.90
7 20 4.8e-09 7.9e-05 23.4 6.4 1 18 319 336 319 337 0.98
8 20 0.51 8.4e+03 -2.2 1.4 5 10 361 366 361 366 0.95
9 20 6.7e-06 0.11 13.4 11.9 1 18 372 389 372 390 0.99
10 20 0.37 6e+03 -1.8 0.3 1 5 399 403 399 403 0.95
11 20 0.078 1.3e+03 0.4 15.1 1 18 424 441 424 442 0.94
12 20 3.8e-09 6.2e-05 23.8 15.7 1 18 451 468 451 469 0.97
13 20 0.59 9.8e+03 -2.4 1.0 5 10 497 502 497 502 0.94
14 20 0.00016 2.6 9.0 6.1 9 19 517 527 515 527 0.88
15 20 0.0068 1.1e+02 3.8 5.9 1 12 537 547 537 547 0.90
16 20 2 3.3e+04 -6.9 4.5 14 18 575 579 575 579 0.86
17 20 3.9e-05 0.65 10.9 6.6 1 11 616 626 616 627 0.97
18 20 1.1e-05 0.18 12.7 14.2 3 19 657 673 656 673 0.94
19 20 6.2e-06 0.1 13.5 9.5 1 15 716 729 716 731 0.97
20 20 1.9 3.2e+04 -4.1 1.2 6 10 766 770 765 770 0.86

Sequence Information

Coding Sequence
ATGAGTACTTCTGCTAGAAATGCTCGAAATCCGTGGTCTAAAAATGAACAACCAAATAAGAAGCCGCGGCAAAATCCAATTAACAGCACTTCAAAATCGGAGAAAAAGTTTCAAGAGGTTCAACAAAAATTGCAAGCAGCTGTTAAGAAGCATGTAAAAGAATACGATTCTTCATCCGAAGAAGAAGAGTTGGAATCAAATACCATATTAGAATCAATTTTAAAGACTTACCATCAAACTGGAGCATCTAAAAATGGTTTACAGAGAACTCAAGAAATAATAAGTGATACTTTTTCATCTGGAACTACGACATGTTTAATATGCATATCATCGATTAAGAGAAACGAATCAGTATGGAACTGTGGAGAATGTTATTGTATGTTTCATTTATCATGTATACAACGTTGGTCGAAGGATACTATAGTGCAACAAAAACAAGCATTGGAGGGTCCAATTGTGGTTTCTTACAAAAAGGAAATTGCATGGGGATGTCCAAAATGTAGGCAAGAATATGGTCCCAATGATATTCCAACGACTTGCACTTGTTTTTGTAAGAAAGCTGTTAATCCACAGTTTCAACCATTTTTGGTACCACATTCTTGTGGTGAGATATGTGGGAAGAATTTGAAACCACATTGTGGTCATGGTTGTGTCTTACTATGTCATCCAGGTCCTTGTCCACCCTGCCCTCAAATGGTTACAGTTACATGTTACTGTGGTGTGAAACCTCCTCAACCGCAAAGATGTTGCAATAAAGAATGGTCATGTGGTTCAGCATGTAATAAATTATTAGCATGCAAGAAACATAAATGTTCACAACGTTGTCATAAAGGGGAGTGTGAACCCTGCGCAAAGAAGAGCATTCAAAAATGCATATGTGGTTCAAACAGTAAATTAAGAAATTGTGCAACCCCAATGTGGCAATGCGAGAAGGTATGTAATAAATCTTTAGAATGTGGGTTTCATAAATGCTTAGAGGTGTGTCACATTGGAGATTGTGATTCATGTGTTCTATCAAAACCTCGTACTTGTTCGTGTGGTAAATCTATATACAATTTACCTTGTACTGAAGAAACCCCAACTTGTGAAGATACATGTGGAAAAATGTTGGAATGTGGTGTCCACCCTTGTAACCAAAAGTGTCATAAGGATAATTGCGGCACATGTTTTCAAACTGTAACCAAAGTTTGTCGTTGTGGATTACATACCAAAGATGTTCAGTGTAGAAAAGTTTACTTATGTGACACTAAATGTAAGGAGATTAAAGACTGTAACAAGCATCCATGTAATCGAAAGTGCTGTGACAAAAATTGTTCACCATGCGAAAAACCATGTGGTCGTACTTTGTCCTGTGGAAATCACAAATGTACCTCAATTTGTCATCATGGCCCTTGTTATCCATGCAATTTAACAGAAAGTGTTAGTTGCTATTGTGGAAAAACTTCCATTACAGTTCCATGTGGTAGAAAACAAAAAACTAAACCGCCAAAATGTAATAAGTTGTGTTTGAATCCACCCAATTGTCATCATTTAAAACGTGAGGAGCATCGTTGTCATTTCGGGGATTGCCCACCTTGCAAACAAATATGTAATCAAGACAGGACAAATTGTTCTCACAAGTGTCCCGCCTCTTGCCATTCTGCAGTCCTTGTTAAAGTTGAATTTGAAAAACCATCCATGCCTTGGGAACAAGTCAAACCCCAACTAGAATTAAAAGCACTGCCATGTCCTGATTGCATAGTCGATGTACCAATGACTTGTTTAGGAAAACATGAAACTTCTAATTTTCCTTGTTATATGGCAAGAGTTTCAAGTTGTGGTAGAACATGTGGTCGCTTAATGGAATGTGGTAACCATCAATGCACCCAAATGTGTCATTTGGTAGAAAATGCCAAAAATGAACTACTGGCTGGAATTAATTGTGAAAAGTGTGAAACAGCATGTGAGAAACCTCGACCGGAAGGATGTCAACATATTTGTTTTAAACCTTGTCATCCTGGTGCTTGTCCACCTTGTAAGCAAATGATTCGTTTGAAATGCCATTGTGGTCTTAATCAACCATACGTTTTATGCAGTACTTGGACTGCCAGCGATAATAAAGAAGAACTACAAACTTGTGGAGATCGGTGTCCTAAAAATTATGAGTGTGGTCATCGATGTCGTTCTAACTGCCATTCAGGTCCATGTGTTACTTTCGAACTATGCAAGAAAAAAATTAAAGTGACTTGCAGCTGCAGACGGATTAAGAAGGATTTTACTTGCGAAATGGTAAAATCCAAACTTGCTATTGTAGAATGTGACGAGACGTGCTTAAAAAAGCAAGAAGAAGAAAAGAAATTGAAAGACAAAGAAGAAGAAATAAAGAAGAAAGAGGAAGAGTTGAAAAATAAGATTGAATTAGAGAAGTTTGAAAAGAAATTTCAAGGAAAAAAGCGCTACAAGGAAAAACGTGTTCTTAATGAATCTGACAATCGGTCTTTTGTACAAAAAAACTGGGTAATGATTTTATCCATTATGATCTTTGTTATTTCCTTAATGTTTTATTATTTACTTTTATAA
Protein Sequence
MSTSARNARNPWSKNEQPNKKPRQNPINSTSKSEKKFQEVQQKLQAAVKKHVKEYDSSSEEEELESNTILESILKTYHQTGASKNGLQRTQEIISDTFSSGTTTCLICISSIKRNESVWNCGECYCMFHLSCIQRWSKDTIVQQKQALEGPIVVSYKKEIAWGCPKCRQEYGPNDIPTTCTCFCKKAVNPQFQPFLVPHSCGEICGKNLKPHCGHGCVLLCHPGPCPPCPQMVTVTCYCGVKPPQPQRCCNKEWSCGSACNKLLACKKHKCSQRCHKGECEPCAKKSIQKCICGSNSKLRNCATPMWQCEKVCNKSLECGFHKCLEVCHIGDCDSCVLSKPRTCSCGKSIYNLPCTEETPTCEDTCGKMLECGVHPCNQKCHKDNCGTCFQTVTKVCRCGLHTKDVQCRKVYLCDTKCKEIKDCNKHPCNRKCCDKNCSPCEKPCGRTLSCGNHKCTSICHHGPCYPCNLTESVSCYCGKTSITVPCGRKQKTKPPKCNKLCLNPPNCHHLKREEHRCHFGDCPPCKQICNQDRTNCSHKCPASCHSAVLVKVEFEKPSMPWEQVKPQLELKALPCPDCIVDVPMTCLGKHETSNFPCYMARVSSCGRTCGRLMECGNHQCTQMCHLVENAKNELLAGINCEKCETACEKPRPEGCQHICFKPCHPGACPPCKQMIRLKCHCGLNQPYVLCSTWTASDNKEELQTCGDRCPKNYECGHRCRSNCHSGPCVTFELCKKKIKVTCSCRRIKKDFTCEMVKSKLAIVECDETCLKKQEEEKKLKDKEEEIKKKEEELKNKIELEKFEKKFQGKKRYKEKRVLNESDNRSFVQKNWVMILSIMIFVISLMFYYLLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01294648;
90% Identity
iTF_00269428;
80% Identity
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