Basic Information

Insect: Rhagonycha fulva
Gene Symbol: ZNF236
Assembly: GCA_905340355.1
Location: HG996559.1:3270748-3278757[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0091 0.26 12.6 6.1 1 23 121 143 121 143 0.99

2 23 0.041 1.2 10.6 0.5 1 23 148 170 148 170 0.98

3 23 7.5e-05 0.0022 19.2 1.0 2 23 176 197 175 197 0.94

4 23 0.021 0.6 11.5 0.2 1 23 203 225 203 225 0.98

5 23 0.045 1.3 10.5 0.9 2 23 239 260 238 260 0.94

6 23 0.0045 0.13 13.6 6.9 1 23 287 309 287 309 0.98

7 23 3.8e-05 0.0011 20.1 0.2 1 23 315 337 315 337 0.98

8 23 0.00024 0.0069 17.6 3.4 1 23 343 366 343 366 0.98

9 23 0.056 1.6 10.2 1.5 1 23 376 399 376 399 0.96

10 23 1.1e-06 3.2e-05 24.9 0.3 1 23 474 496 474 496 0.98

11 23 0.00025 0.0071 17.6 5.5 1 23 502 524 502 524 0.97

12 23 0.0034 0.1 14.0 1.0 1 17 530 546 530 547 0.94

13 23 0.72 21 6.7 4.8 5 23 634 652 625 652 0.92

14 23 0.0013 0.037 15.3 4.3 1 23 658 681 658 681 0.96

15 23 0.0011 0.032 15.5 1.0 1 23 687 709 687 709 0.95

16 23 0.23 6.7 8.2 6.0 1 23 715 737 715 737 0.96

17 23 3.5e-05 0.001 20.3 1.8 3 23 1130 1150 1129 1150 0.98

18 23 1e-05 0.0003 21.9 3.3 1 23 1156 1178 1156 1178 0.98

19 23 0.00034 0.0099 17.1 0.1 1 23 1186 1208 1186 1208 0.97

20 23 0.0011 0.032 15.5 3.6 1 23 1214 1236 1214 1236 0.99

21 23 8.4e-05 0.0024 19.1 4.0 1 23 1376 1398 1376 1398 0.98

22 23 0.003 0.088 14.1 1.7 2 23 1402 1423 1401 1423 0.96

23 23 0.00056 0.016 16.4 1.1 1 23 1429 1452 1429 1452 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0091	0.26	12.6	6.1	1	23	121	143	121	143	0.99
2	23	0.041	1.2	10.6	0.5	1	23	148	170	148	170	0.98
3	23	7.5e-05	0.0022	19.2	1.0	2	23	176	197	175	197	0.94
4	23	0.021	0.6	11.5	0.2	1	23	203	225	203	225	0.98
5	23	0.045	1.3	10.5	0.9	2	23	239	260	238	260	0.94
6	23	0.0045	0.13	13.6	6.9	1	23	287	309	287	309	0.98
7	23	3.8e-05	0.0011	20.1	0.2	1	23	315	337	315	337	0.98
8	23	0.00024	0.0069	17.6	3.4	1	23	343	366	343	366	0.98
9	23	0.056	1.6	10.2	1.5	1	23	376	399	376	399	0.96
10	23	1.1e-06	3.2e-05	24.9	0.3	1	23	474	496	474	496	0.98
11	23	0.00025	0.0071	17.6	5.5	1	23	502	524	502	524	0.97
12	23	0.0034	0.1	14.0	1.0	1	17	530	546	530	547	0.94
13	23	0.72	21	6.7	4.8	5	23	634	652	625	652	0.92
14	23	0.0013	0.037	15.3	4.3	1	23	658	681	658	681	0.96
15	23	0.0011	0.032	15.5	1.0	1	23	687	709	687	709	0.95
16	23	0.23	6.7	8.2	6.0	1	23	715	737	715	737	0.96
17	23	3.5e-05	0.001	20.3	1.8	3	23	1130	1150	1129	1150	0.98
18	23	1e-05	0.0003	21.9	3.3	1	23	1156	1178	1156	1178	0.98
19	23	0.00034	0.0099	17.1	0.1	1	23	1186	1208	1186	1208	0.97
20	23	0.0011	0.032	15.5	3.6	1	23	1214	1236	1214	1236	0.99
21	23	8.4e-05	0.0024	19.1	4.0	1	23	1376	1398	1376	1398	0.98
22	23	0.003	0.088	14.1	1.7	2	23	1402	1423	1401	1423	0.96
23	23	0.00056	0.016	16.4	1.1	1	23	1429	1452	1429	1452	0.97

Sequence Information

Coding Sequence: ATGAAAACCATTGACGACGAGATTCCAACAAACGCTGAAGGATGTGAAATTTACACTTACATAGCGATACCGATTAATAGTCTTAAGCAGGGCAATGATATTATTCAATCTGTGGAACCTATGGAAATTGCATCGAATGTGCTTTACAACGTTTTACCACACGACGTTGCCAACGAAAAAATTCAGACGTACACCTTAACAGATCAGTTCATCGAAACTTTGAGAGAGAACAATCGGGAGCACATTACAGGAGTAATTGAAAGTCAGGAAGGTTTGAGACCTACAGTTATAGAACAAATCAATAACACGAGGAAGTCGGTGATCTTGCAAACAAATTCAAATGAAGATGACGCATCTGATTACAAGTGTAAGAGTTGCAGTAAAGTGTTTAAAACGCGTTTGAGTTACCATAAGCATTTAAAAATACACAAGGAGAAGCCCTACAAGTGTTACGAGTGCTCGGCAAGTTACAACTATGAGATTAATTTGAAGTTGCACAAAATTGTACATGAAAATAACGTGACCCAATGTCCCGTGTGTGAGAAATCATTTAACAGAAAGGCCAGTTTGAAAAATCATGTTACTTTTCACGAAATCGAAGAGACTTATACGTGTTCCGAATGCTTGGCTGAATTTGATTCTGAGGAAGAATACAACAAACACATCCAAAATCACAAAAGTGAGGCCCAATTAAGGTCACTACAGAAATCGTTAACTTGTTCGGTTTGTGACCAACAGTTTGAAAATCGTGCCAAATATAAGGAACATTTATCATTTCACACCGAGGTGAAAAAATTAATGAAGATTAAGAAAACACGTAAAAAACGCCAAGTGGTGAAAAAAGTTCCATCAAAATCACATGTATGTGATGTGTGTAAAAAGACATTTTCCAAGTATTGCTTGCTTCTAAGACACAAGAGAACCCACACTGGTGAAAAGCCTTATTCTTGCCAGTATTGCGATCGCGCCTTTGCACAGAAGGGAACCTTAGACGTTCACATAAAAATTCACACCGGATTGAAGGCATACCAGTGCACAATTTGTCAGGCCAAATTTAATCAAAGGTGTAATCTAAGGGCTCACGTTCGAAGAACTCATTTGCACGCAAATATCTCGGAAAAAACCTACAGTTGCCAGCTTTGCGCGTGCGTTTTCACTAGAATTGCATCTTTAAATGCTCATACCACTCGGTACCACAGAGGTGATAAGGAATCCCACGATATTATGGACCTTATGCAGCAAATAGACCAACTAGAAAACCAAATGAACAATAAAAGCAATCTTTCACTGAGCGAACTCTCAAGAAGAAATACAATTCAAAACGATTCAGAAAAATTTGTAAGACTGGCCGATTCAAGTGTTGAAGGTTCTATACAATATTTAAGGGTGAAACAGAAAAAAACTCTGGATGGACTGTGGTATGCCTGCTCCTATTGTGAGAAGGAGTTTAAAAAACCTTCGGATTTAATTCGCCATATTAGGATCCACACCATGCAAAAGCCTTTCAAATGTAAACATTGTAATCGTCGGTTCTCATTGCAATCGACTCTTAAGAAACACGTAAATGATCATGCCAATTTACGCAGTTATGAATGTACTATGTGCAAGAAGACGTTCAGTTCTAAGAGTGGTTTGAAAAATATCGCCAGGGCTAATGAGAAAAACGCGGCGCCGAAACTTGCATGTGGTTCTTGCATGTCAGTTGTTTCTGAATTGAAAACCAAAAACATTAATATTGAAAAATTAGATACCCAAAAGATTCTAAATAATTTAAATATCGAGATTGAATTAAAACAACCAATTGTGGAAACTCCTGAAGGTTTGGTACCCATTATTTCACCCAAATCGAAGATTTATTCAGACAGTGCCAACTGCAATAAGCCTAAGTTGCACAAGTGTCATTGTGGATCTGAATTTTTCCGCCTGAAGAATTTACAGCAACACATGTTGATTCATACAAGTGAAAAGAAATTTAAATGCTCTGTTTGCCCTAAATGTTTCCACAGTTCAAGCCGATTAAAGGAACATTTAAATTTGGCTCATAATGCTGAAAGAAAGTTTTTGTGCAGAATATGTGACAAACGTTTTGTTTCAAACTCCATTTTAAAAAGACATCTAGACACACACAGTCATATCAAACCTTACATCTGCCCTTACTGCAAAAAGCGTTTTAGAACTGTCCTACATTGTCGTCAACACATCAAACTTCACAAAAAAGATGTCTTGTTAAACACATTGGCAGGATCCGATGCTAACAAATTTACTGCTAGTTTTGTGACGGAGGCAACACTTCCTGAAAATTTGTTTGCTAATTCGTTACCTGATGGTACCTACAATTTAGGTTTAAATTTTGATAATTTAACCGACTCCACTGCTATACCTGGTGGTTCCAATCTTTTATCTGAAGTTTCTGCAGAACAGAATGAAGGCGATTCTAGAACACAAATTTTGTACACAGATAAAAGCAGTGGAGTGGTAGTTTCCGCACCCTTAGATATTTCTCAGGCACATCAAGATGGGAAGAGTAAGCTGGATCAACAGTTGTTTTTAACGTCTACTGCTTTACCCAGTTATGATGACTCAACAAAAAATATTATTGCAGATAATTTAGAAAATGTGGATGATTCCATTACTAATTTACCACAAGAAAATTCGACGGTTTTTCTAAATTTTGACGATCTGCAATTATCTACTTCTAATCTGTATAGCTCATACCAAAATTTGAAAAATTTTGACCAACTGTTGGGAGAAATAAGTGAAATTCCAGACAACAACATTTTGTTGACTTCTGATGCTACTCTTAGTCAACTAACCGATTCTCAATTGGATTCTTCAAATTTTGATGGATTAATGCCCTTTGCTTTTAACACCAACTTATCCTTAAATAACGTTACTCTATCCAGCTCAAATCCCTTCCCAAACGTCATTCTTTCAAATGCTGATGAAGATGGATCTGATCTTAACCAAGCTCCACTACCTAATCTACCTTATGACGGTAAAAAAGGTTCCGAGGAAGAAGAATCAGAAAAAATGATGGAGACAGAGCAGGAAAATCCACTTTTATCCAACCTTCTTGAAACTTCGTCCAGCAGTGAGTCCATAATTCCAAACACGGAAGAATCGATTTTTGGAAACGTCGATTTCACCTGCTCTTCCTGCAAGGAATATTTGGATAATGTAGATGAGTTAGTGCATCATAGGTGCTCTAAAAAAATTTCTGCAGAAGGAAGTGAAAATGGTGGTTTACCAAGCTATGAAGATTCTATTCAAGCAAAGAAAAAGATTAAAGGTGGTCGTAAAAATAAGAAGGGCAATAAAACCATCCCCAACAAACTTGGTGTACAAACTGCAAATCACAAAGACAAAAAAACTGCAGCCTCAAATATTTGTTCCTATTGTCAGAAGGATTTTAAGAAGCGTTCAGATTTGCTAAGACATGTTAGAACTCATACCGGAGAGAAACCCTTCAGTTGTGATAAGTGCCAAAAGACTTTTACACTCAAATCGACGTTAGAGACCCATCAGAGAACTCACAATCCAGAATCACATCGAAAATTTGATTGTGGAGTTTGTGGTACGAATGTCAGCTCTAAGGCGAGTTTACGAGTTCACATGATGATGCACACAGGTGTAAAACCTTACCAGTGCTCCGTTTGCCTTGAAAGTTTTAGAACCACCGGGCACAGGAGATCTCACATGAGGACCCACTTAAATAACAACAAAGCAAGCAAGCAGTCGAAATCGGCTAAAGTAACCTCCATGCTGCAATCTGTTATCACAGAAACTCAAAACAATGAAGAAATGTTTGAAGAGGTTTTGTTATTAAACAATTCCCAACCGTTACAAGAAAATAAGGAACTCACTCTACATGACTCTGAGGTTCTCTTCCCCAATCAAACAGTTCAAGTGGATTCCTTAATTTTGCAGCAGTTACAAGAAAGTTGTGTTTTGCTAGAAGATGGAAACGAAAGAATTCCACCTTTTATTCAGGTTGATATTAATAACTTTGGAGAAATAACTAACGTCAAGTCGATTCGAGACATTCAGGAATCATTCAAAGCTGCCGAGCCGGATAAAAGCAGTGAAAGCACTTATGTTACGAAAAATGTATCTCTTGAACGGAATTTTGAGTGTGATATTTGCCATAAAAAGTACACCACTAAATCTGTGCTTACGAAACATAAGAGAATACACAATAAGTTGCATTGTTCAAAGTGTAACATTAACTTTACACAGACTGAAGAATTACAGGAACACTTGAAAATTCACAATGTAGATCGGCCCTTTGCTTGCTCTCTCTGTGACAATAGATTTAGTCTCAAGAAAAATTTAATAACGCATATGAAAAGAATTCATAGCTCTAGTTTTCAGTGA
Protein Sequence: MKTIDDEIPTNAEGCEIYTYIAIPINSLKQGNDIIQSVEPMEIASNVLYNVLPHDVANEKIQTYTLTDQFIETLRENNREHITGVIESQEGLRPTVIEQINNTRKSVILQTNSNEDDASDYKCKSCSKVFKTRLSYHKHLKIHKEKPYKCYECSASYNYEINLKLHKIVHENNVTQCPVCEKSFNRKASLKNHVTFHEIEETYTCSECLAEFDSEEEYNKHIQNHKSEAQLRSLQKSLTCSVCDQQFENRAKYKEHLSFHTEVKKLMKIKKTRKKRQVVKKVPSKSHVCDVCKKTFSKYCLLLRHKRTHTGEKPYSCQYCDRAFAQKGTLDVHIKIHTGLKAYQCTICQAKFNQRCNLRAHVRRTHLHANISEKTYSCQLCACVFTRIASLNAHTTRYHRGDKESHDIMDLMQQIDQLENQMNNKSNLSLSELSRRNTIQNDSEKFVRLADSSVEGSIQYLRVKQKKTLDGLWYACSYCEKEFKKPSDLIRHIRIHTMQKPFKCKHCNRRFSLQSTLKKHVNDHANLRSYECTMCKKTFSSKSGLKNIARANEKNAAPKLACGSCMSVVSELKTKNINIEKLDTQKILNNLNIEIELKQPIVETPEGLVPIISPKSKIYSDSANCNKPKLHKCHCGSEFFRLKNLQQHMLIHTSEKKFKCSVCPKCFHSSSRLKEHLNLAHNAERKFLCRICDKRFVSNSILKRHLDTHSHIKPYICPYCKKRFRTVLHCRQHIKLHKKDVLLNTLAGSDANKFTASFVTEATLPENLFANSLPDGTYNLGLNFDNLTDSTAIPGGSNLLSEVSAEQNEGDSRTQILYTDKSSGVVVSAPLDISQAHQDGKSKLDQQLFLTSTALPSYDDSTKNIIADNLENVDDSITNLPQENSTVFLNFDDLQLSTSNLYSSYQNLKNFDQLLGEISEIPDNNILLTSDATLSQLTDSQLDSSNFDGLMPFAFNTNLSLNNVTLSSSNPFPNVILSNADEDGSDLNQAPLPNLPYDGKKGSEEEESEKMMETEQENPLLSNLLETSSSSESIIPNTEESIFGNVDFTCSSCKEYLDNVDELVHHRCSKKISAEGSENGGLPSYEDSIQAKKKIKGGRKNKKGNKTIPNKLGVQTANHKDKKTAASNICSYCQKDFKKRSDLLRHVRTHTGEKPFSCDKCQKTFTLKSTLETHQRTHNPESHRKFDCGVCGTNVSSKASLRVHMMMHTGVKPYQCSVCLESFRTTGHRRSHMRTHLNNNKASKQSKSAKVTSMLQSVITETQNNEEMFEEVLLLNNSQPLQENKELTLHDSEVLFPNQTVQVDSLILQQLQESCVLLEDGNERIPPFIQVDINNFGEITNVKSIRDIQESFKAAEPDKSSESTYVTKNVSLERNFECDICHKKYTTKSVLTKHKRIHNKLHCSKCNINFTQTEELQEHLKIHNVDRPFACSLCDNRFSLKKNLITHMKRIHSSSFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01294074;
90% Identity: iTF_01294074;
80% Identity: -