Rful008923.1
Basic Information
- Insect
- Rhagonycha fulva
- Gene Symbol
- -
- Assembly
- GCA_905340355.1
- Location
- HG996554.1:111338269-111341606[-]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.0046 51 5.0 0.1 16 32 111 127 108 130 0.89 2 3 0.0012 13 6.9 0.1 15 33 145 163 142 168 0.89 3 3 3.2e-05 0.35 11.9 0.2 15 46 180 211 177 220 0.94
Sequence Information
- Coding Sequence
- ATGATGATGCTCTCGTTAGGATTTACAATTATTGTAGTTATTTTTGGTGTGGTTACTTCTCAGAACCATGATGCCAATTTACAAACCTCATTTAGAGGGATGATCAGAAAAAGAAGTGCGGAAGCTACAACCCCGATTTCCTTCGACCCTAACGTGGAAAATAAAGGGATGAAGCTACTAACTCGTTTGGAAGGTTTACGGATAGAAAAATTGGAGTTCTTAATAGCGGACACCAACAGCCGCTTTGAATTTTTGGAAAATCAGTTGTCCCAAGGTTCTTCATGTCCTTCGTCCCCCGTCGTTCAAAATATCGAAAACTTGGAACTCAAAGTGGAAAATTTGGGTAAAAATATTCAAGAATTGATGGATGCCATTAAAAACATACCAAGTTCTGTGTCGCCGGTCGTTCAGAATAACGAAAATTTGGAAGCCGAAGTGGAAAATTTAGGTAAAAATATTGAAGAATTGATGAATGCCACTAAAAATTTGCCAAGTTCTGCGTCCCCGGTCGTTCAGAATATCGAAAACTTGGAAGCCAAAGTGGAAGATTTGGGTACAAATATTCAAGAATTGATGGATGCTATTAGAAATTTGACATCCGATGTAGAAGCGATAAAGCAAAACGTTTCGTCTCTTATTAATGTTACAAGATTACAAGCAACCTCGACTACTGTCCCGCTCAATGGTACTGTACAATATCCAAGAAATTGTAGAGAGGTTCAAGAATCTCAAAAAACAGCTACTGATACCAACATGATACAACCGGAAGGTGCGCCAAAACCTTTCGAAGTTGTATGTGATTTAAAAACTATGGGTGGCGGTTGGACGGTGATACAAAGAAGATTTGATGGCTCGCAAGATTTTTATTTGGATTGGCAACATTACAAGAACGGTTTCGGTAATTTGAGGAGCGAATTTTGGCTTGGCTTAGAGAACATTCATCTCTTAACGGGTTTAGAAGACAACGAATTGCTGATTGAGTTAGGTGGTTTTGAATCAAACAACATAAGTGCATCTTACTCCAAATTCAAAGTTGGATCAGAAATGGAAGGATATCATTTAGAGAAGTTGGGTGCATATTCGGGAAATGCTAGTGATTCATTGATTCAACAAGTTGGAAGCAAGTTTACTACTTATGATAACGATCAAGATAATTATGCATCTTATAACGGGGCGCAACGTTGGCATGGTGCCTGGTGGTACAACCACGATGCTTATAGCAATTTGAATGGAAAGTATTTTGAACGTGGCGAAGTACCTGATCCATATTATATTAATATATATTGGTATAGGTATAAGAACACTCAGTACAGTTTGAAACATACTAGGATGTTAGTGCGGCCTAAGGTGTAA
- Protein Sequence
- MMMLSLGFTIIVVIFGVVTSQNHDANLQTSFRGMIRKRSAEATTPISFDPNVENKGMKLLTRLEGLRIEKLEFLIADTNSRFEFLENQLSQGSSCPSSPVVQNIENLELKVENLGKNIQELMDAIKNIPSSVSPVVQNNENLEAEVENLGKNIEELMNATKNLPSSASPVVQNIENLEAKVEDLGTNIQELMDAIRNLTSDVEAIKQNVSSLINVTRLQATSTTVPLNGTVQYPRNCREVQESQKTATDTNMIQPEGAPKPFEVVCDLKTMGGGWTVIQRRFDGSQDFYLDWQHYKNGFGNLRSEFWLGLENIHLLTGLEDNELLIELGGFESNNISASYSKFKVGSEMEGYHLEKLGAYSGNASDSLIQQVGSKFTTYDNDQDNYASYNGAQRWHGAWWYNHDAYSNLNGKYFERGEVPDPYYINIYWYRYKNTQYSLKHTRMLVRPKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -