Basic Information

Insect: Rhagium mordax
Gene Symbol: stc
Assembly: GCA_963680705.1
Location: OY796658.1:66640063-66651457[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 6.6e+04 -4.8 3.4 6 10 407 411 404 411 0.69

2 16 0.92 3.1e+04 -3.0 0.3 4 10 437 443 437 443 0.90

3 16 9.6e-06 0.32 12.9 13.7 3 18 451 466 450 467 0.93

4 16 2.7e-09 9e-05 24.2 13.9 1 18 503 520 503 521 0.99

5 16 1.3e-10 4.4e-06 28.4 15.1 1 19 561 579 561 579 0.99

6 16 0.63 2.1e+04 -2.5 0.2 3 6 585 588 585 589 0.80

7 16 1.5e-07 0.005 18.6 15.8 4 19 626 641 619 641 0.87

8 16 1.4 4.6e+04 -3.6 2.0 5 10 670 675 670 675 0.93

9 16 0.005 1.6e+02 4.2 9.0 1 11 681 691 681 692 0.96

10 16 1.5 5.1e+04 -3.7 0.8 4 10 696 702 695 702 0.69

11 16 2e-10 6.6e-06 27.8 14.5 1 18 708 725 708 726 0.98

12 16 1.5 5e+04 -3.7 0.7 6 10 755 759 754 759 0.85

13 16 0.0029 95 5.0 13.7 1 19 765 782 765 782 0.92

14 16 0.31 1e+04 -1.5 0.6 6 11 785 790 785 792 0.90

15 16 2.3e-09 7.8e-05 24.4 16.4 1 19 818 837 818 837 0.97

16 16 0.0045 1.5e+02 4.4 16.0 1 18 847 865 847 866 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	6.6e+04	-4.8	3.4	6	10	407	411	404	411	0.69
2	16	0.92	3.1e+04	-3.0	0.3	4	10	437	443	437	443	0.90
3	16	9.6e-06	0.32	12.9	13.7	3	18	451	466	450	467	0.93
4	16	2.7e-09	9e-05	24.2	13.9	1	18	503	520	503	521	0.99
5	16	1.3e-10	4.4e-06	28.4	15.1	1	19	561	579	561	579	0.99
6	16	0.63	2.1e+04	-2.5	0.2	3	6	585	588	585	589	0.80
7	16	1.5e-07	0.005	18.6	15.8	4	19	626	641	619	641	0.87
8	16	1.4	4.6e+04	-3.6	2.0	5	10	670	675	670	675	0.93
9	16	0.005	1.6e+02	4.2	9.0	1	11	681	691	681	692	0.96
10	16	1.5	5.1e+04	-3.7	0.8	4	10	696	702	695	702	0.69
11	16	2e-10	6.6e-06	27.8	14.5	1	18	708	725	708	726	0.98
12	16	1.5	5e+04	-3.7	0.7	6	10	755	759	754	759	0.85
13	16	0.0029	95	5.0	13.7	1	19	765	782	765	782	0.92
14	16	0.31	1e+04	-1.5	0.6	6	11	785	790	785	792	0.90
15	16	2.3e-09	7.8e-05	24.4	16.4	1	19	818	837	818	837	0.97
16	16	0.0045	1.5e+02	4.4	16.0	1	18	847	865	847	866	0.93

Sequence Information

Coding Sequence: ATGTCTTTTTATAATAATCAGTCaaattattatgtaaatttCGATTCAACTTATGAAGCTCATAACAGTGCTCAAAGTTCATTTAATGATTACTCAAACCCACCAGAGGTTACTAATGAAGTTGTCAATGTTAGTTATTCGACATTAGAACCTACAGCTCAGGAATTCCATCCATTAAACCAAGGGTCAAGTTCCCTTAATGGAGCTGTGAAAAAGAGAACTCAAAATGATAGAAGTAAGTATAGGGACAATCGAGGAGATAGTGGAAGAAGTAGAAATAATTGGTACGGAAGTGGTAGAACATTTAATGGATCTAAATatgattatacaaataaaactgaCAGAAGCATTAATGGTGAAGAACGAAATAAGATTTTACAAGACACAGCCAGCTTTTTAAGAAATTCCAGTCACGAGAAAAGTGAAAACGTTGATGAAGATTCACTTGCTCACAGTTCTTATTCTGTAAATGTAAATTCGTCAAAGGAGAATAGAAATTTTGAACGTTCAAGAAATTTTGATCATCAAGAGCAAACTAATACAAATTACGGTAAATATAATGAAAACGTAGAAACAACTTATCAGAAATATAAAGCTACTTCAGATAATCAGAGATCATTTCAAAGTAGACATTTTAAACGCGACAAAGCATACGATAAGTCAAATAGATCTAGTTTTCACAATAAACATGAGCGAAGTTATAATTactttgaaaattatgaaaagaatactaattataataaacCAGGAAGAAGTTACAattactgtgataaaaaaagtAGTTATGATAATGTCCCTATTAATGACTCAGTTGATAAGTCTGATAGAAGTAATTTTGATCAGTTTGATAATAGATATAGTTATGAGGGAAAAGAAGGTAGTTCTGTTAACTTTAAACctgggtttaaacaatatgataGTAAAAATGGGAATAAATATGGAGAGGGAAAAATTCGAAGAGATTGGAGAAAACAGAATAAAGACAAACCTAAggattttattgtaaaacaaaacaaaaaatTTGATACAGCCTCTCAAAGGGAAAGACTAGAGGAGATGTTGAACCGCCGTCTATTAGAATGTCTTGTGTGCtgtgaaaaaattaaacatgtcgataaaatttggaattgcaTGCAGTGCTATCACATTTTACATTTAAGTTGTGTAGCTGCTTGGGCAAAGTCATCAAAAGTTGAAAATGGTTGGCGTTGTCCAGCTTGCCAAAATGTTTGTACTGATGTTCCCATAAGGTACATGTGCTACTGTAATAAAACGATAGATCCTAGATATGATCCAAGTACCATACCCCATGGATGTGGAGAAATATGTCTAAGAAAAGGCCGTATCTGTGAACATAAATGCACTATACTGTGCCATCCAGGTCCATGTCCTGACTGCAATGTAATGGTATCAAAACCATGTGGTTGTGGGGAAACACAGCAAGTAGTAAAATGTAGTACCGACATAGAAATTGTTTGTGATTCTATCTGTAATAAAACGTTAGATTGTGGCATTCATAAATGCAAGTCTGTATGTCATTCTGGAAAATGTAGTCCGTGTGGTGAGACTATAATACAAGAGTGTTATTGTGGAAAAGTAGGTAGAAAGGTATCTTGCTCCGCTGAATTTTCTGGTAATACCCAATATGCATGTGAGGATATTTGTGGAAAAACATTATCCTGTGGAAATCACAAATGTCAGAAAATATGCCATGAAGGGCCTTGTGACACTTGTCCTCGAGATATTAGTATTATACATACTTGCCCCTGTGGGAAAACACCTCTTGAAAAATCCAGAACTTCTTGTTTAGATTCCATTCCTTGCTGTAATAagatATGTGGAAGATCACTTAAATGTGGTCAACCTAGTTTGCCACATAAATGCAGAGAGCCATGTCATGAGGGTGACTGTCCACCTTGCCCTCTAACTACTGTGGTTCGATGTCGCTGTGGTCATATGGATAAGGAGTTGCCATGTCAAAAAGTTACCACTAAAGCTGATGATGCCAGATGTGAAAAAAAGTGTACGAAGAAACGTATGTGTGGTAAACATAGATGCAACCAACGATGCTGCATAGAAATTGAACATTTCTGTCCGCTTCCTTGTAACCATCAACTTTCATGTGGTCAGCATAGATGTGAACGCACATGTCATTCGGGCCGATGTCCTCCATGTATGGAAACGAGCTTTGAGGAATTATATTGTGAATGTGGAGCTAGTGTCCTATATCCACCTATTCCATGTGGGACCAAACCTCCGGCTTGTAACAAACCTTGCTCAAGGCAACGACCATGTGGACATGAATCAAATCATAGCTGTCATATTGGTCCTTGTCCTCCCTGTACAGTGCTATGTACAAGGTGGTGTCATGGACAGCATGAACAACGGTCAGCCATTCCGTGTCATCAAGAGACCTTTAGCTGTGGTTTACCTTGTGGAAAGAAAATGCCATGTGGAAGACATAAATGCAACAAACCATGTCACGAAGGGCCATGCCCCATGCCTTGTAAACAACCTTGCAATGTTAGGAGAACGTTATGTGGCCATCCTTGTGGAAAACCATGTCATGATGCGCCTTGTCCAGAGAGCAGTTGCAAACAAAATGTTCCAGTTACGTGCTTATGTGGTCACCAAAAAAGTACCAAGCCTTGTATAGAGGTGGCTGAGGAGTTTATTAATATAGAAATGGCTAAGCTAAAGGAAAAAATGGGCGATTTGTCTAAAGATCAAACCGTAGATATTTCTGATATCGTCAGCAAACCTAAGAAGCCTAGTGTTCTTAagatatTGGACTGTACCGAAGAATGTCGAGTTTTGGAAAGAAATCGAAAGCTTGCTATTGGTTTACAAATACGAAATCCAGATTTAAGTCAAAAGTTAACACCAAAATATACCGATTTTATGAGACAATGGGCAAAAAAAGATCCGCATTTTTGTCAAAGAATTCATGACAAGTTAACAGAACTTGTTCAACTAGCGAAACAGAGTAAACAAAAAAGTAGGTCTTACTCTTTTGACTCTATGAATAGGGATAAACGTCATTTCATTCATGAATATTGCGAACACTTTGGGATAGAAAGCGCTGCATATGATATGGAACCAAATAGAAATATTGTAGCCACTGCCAATAAGGATAAGTCTTGGCTACCTAGTATGAGTTTATTAGAGGTTATTCAGAGAGAAAATGGCCAACGAAAAGTACCAGGGCCTATTTCTGTTTTGAGTAGAACCATTGCTAGTAAACCTGAAACTGTGTCTTTAAAATTACCATGCCAAATACAGAGGCCAAGTACACATTCTGGAGAGTTTATAGATTATTTCGATCCACCAGAGtag
Protein Sequence: MSFYNNQSNYYVNFDSTYEAHNSAQSSFNDYSNPPEVTNEVVNVSYSTLEPTAQEFHPLNQGSSSLNGAVKKRTQNDRSKYRDNRGDSGRSRNNWYGSGRTFNGSKYDYTNKTDRSINGEERNKILQDTASFLRNSSHEKSENVDEDSLAHSSYSVNVNSSKENRNFERSRNFDHQEQTNTNYGKYNENVETTYQKYKATSDNQRSFQSRHFKRDKAYDKSNRSSFHNKHERSYNYFENYEKNTNYNKPGRSYNYCDKKSSYDNVPINDSVDKSDRSNFDQFDNRYSYEGKEGSSVNFKPGFKQYDSKNGNKYGEGKIRRDWRKQNKDKPKDFIVKQNKKFDTASQRERLEEMLNRRLLECLVCCEKIKHVDKIWNCMQCYHILHLSCVAAWAKSSKVENGWRCPACQNVCTDVPIRYMCYCNKTIDPRYDPSTIPHGCGEICLRKGRICEHKCTILCHPGPCPDCNVMVSKPCGCGETQQVVKCSTDIEIVCDSICNKTLDCGIHKCKSVCHSGKCSPCGETIIQECYCGKVGRKVSCSAEFSGNTQYACEDICGKTLSCGNHKCQKICHEGPCDTCPRDISIIHTCPCGKTPLEKSRTSCLDSIPCCNKICGRSLKCGQPSLPHKCREPCHEGDCPPCPLTTVVRCRCGHMDKELPCQKVTTKADDARCEKKCTKKRMCGKHRCNQRCCIEIEHFCPLPCNHQLSCGQHRCERTCHSGRCPPCMETSFEELYCECGASVLYPPIPCGTKPPACNKPCSRQRPCGHESNHSCHIGPCPPCTVLCTRWCHGQHEQRSAIPCHQETFSCGLPCGKKMPCGRHKCNKPCHEGPCPMPCKQPCNVRRTLCGHPCGKPCHDAPCPESSCKQNVPVTCLCGHQKSTKPCIEVAEEFINIEMAKLKEKMGDLSKDQTVDISDIVSKPKKPSVLKILDCTEECRVLERNRKLAIGLQIRNPDLSQKLTPKYTDFMRQWAKKDPHFCQRIHDKLTELVQLAKQSKQKSRSYSFDSMNRDKRHFIHEYCEHFGIESAAYDMEPNRNIVATANKDKSWLPSMSLLEVIQRENGQRKVPGPISVLSRTIASKPETVSLKLPCQIQRPSTHSGEFIDYFDPPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01297052;
90% Identity: -
80% Identity: -