Rmor013947.1
Basic Information
- Insect
- Rhagium mordax
- Gene Symbol
- -
- Assembly
- GCA_963680705.1
- Location
- OY796657.1:47153602-47154560[+]
Transcription Factor Domain
- TF Family
- TSC22
- Domain
- TSC22 domain
- PFAM
- PF01166
- TF Group
- Basic Domians group
- Description
- These proteins are highly similar in a region of about 50 residues that include a conserved leucine-zipper domain most probably involved in homo- or hetero-dimerisation. Drosophila protein bunched [1] (gene bun) (also known as shortsighted), a probable transcription factor required for peripheral nervous system morphogenesis, eye development and oogenesis.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.006 1e+02 5.0 0.5 23 43 3 23 1 27 0.85 2 2 5e-09 8.2e-05 24.5 1.7 19 48 27 56 25 65 0.88
Sequence Information
- Coding Sequence
- ATGGACATATTGTCTTTAACCATCTCAAATGAAGAACTCAAAGCTGAAAATCAAGACCTAAGACAATCTAATAAAGCTTTATCTGATCAAATTACCGAATTAactcaaaaaataaacaaattacaaaaagaaaatgaaatctATAAAACTGAAATATCAACAAACAAAAACGATCATTTACCAGTCAACAACAATATACTTGGAGCTGAAATTCAGGAATTCATTTCATCTGAAATTGAGAAGAAGTTTTCATTATATTTAGAAGATTTAAATGCTGTGaagAACAACACTGAAGTTATCTCGGAAAATAATGACAACAATGACGGATTTATACTTCCCAAAAACAACAGAAGATTTAGACAAAAAACAGTTATAGGACAAAATGAAAACTACACAAATCTAAAAGCAGTCAAACCTTTAAGTTGGATCTTCATATCCCGCTTGGAGCCAGAAACTTCTGTAGACGATGTTATAAACTATCCTCGAAACTATCTTGATGATTATGATTTCAAAGTTTCACAGTGTTTAAAACTGAAAACCTTTTCCAATGATATAGCTGCATTTAAAGTCGGAGTCAAGCAATCAGATGAAGATAGTGTGTTTTCTGAAAAAATCTGGCCACGAAAGACAATTATTCGTCAATACGATCCCAAAGGTCTTAAAAATTTTCAGAAACCTCCCCCTGCTTCACTAaaaagatga
- Protein Sequence
- MDILSLTISNEELKAENQDLRQSNKALSDQITELTQKINKLQKENEIYKTEISTNKNDHLPVNNNILGAEIQEFISSEIEKKFSLYLEDLNAVKNNTEVISENNDNNDGFILPKNNRRFRQKTVIGQNENYTNLKAVKPLSWIFISRLEPETSVDDVINYPRNYLDDYDFKVSQCLKLKTFSNDIAAFKVGVKQSDEDSVFSEKIWPRKTIIRQYDPKGLKNFQKPPPASLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -