Basic Information

Insect: Reticulitermes lucifugus
Gene Symbol: -
Assembly: GCA_026260175.1
Location: JAKCWW010004424.1:9292-22780[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.027 2.7 9.3 0.8 2 23 415 437 414 437 0.96

2 16 9.8e-06 0.00097 20.2 0.8 1 23 442 464 442 464 0.98

3 16 0.00011 0.011 16.8 2.5 1 23 477 500 477 500 0.93

4 16 0.0021 0.21 12.8 0.3 1 23 506 528 506 528 0.98

5 16 3.6e-06 0.00036 21.5 3.3 1 23 534 556 534 556 0.96

6 16 4.4e-06 0.00044 21.2 1.0 2 23 566 587 565 587 0.97

7 16 0.0014 0.14 13.4 2.8 1 23 593 615 593 615 0.93

8 16 1.3e-05 0.0013 19.7 3.4 1 23 621 643 621 643 0.99

9 16 0.0037 0.37 12.1 0.2 1 23 649 671 649 671 0.98

10 16 0.00022 0.022 15.9 0.2 1 23 695 717 695 717 0.99

11 16 9.7e-06 0.00097 20.2 0.6 1 23 723 746 723 746 0.98

12 16 0.14 14 7.1 0.5 1 23 752 774 752 774 0.93

13 16 0.00068 0.067 14.4 0.8 1 23 780 802 780 802 0.98

14 16 3.9e-06 0.00039 21.4 2.4 1 23 808 830 808 830 0.97

15 16 3.8e-06 0.00037 21.5 1.6 1 23 836 858 836 858 0.98

16 16 3.6e-06 0.00036 21.5 1.4 2 23 865 886 864 886 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.027	2.7	9.3	0.8	2	23	415	437	414	437	0.96
2	16	9.8e-06	0.00097	20.2	0.8	1	23	442	464	442	464	0.98
3	16	0.00011	0.011	16.8	2.5	1	23	477	500	477	500	0.93
4	16	0.0021	0.21	12.8	0.3	1	23	506	528	506	528	0.98
5	16	3.6e-06	0.00036	21.5	3.3	1	23	534	556	534	556	0.96
6	16	4.4e-06	0.00044	21.2	1.0	2	23	566	587	565	587	0.97
7	16	0.0014	0.14	13.4	2.8	1	23	593	615	593	615	0.93
8	16	1.3e-05	0.0013	19.7	3.4	1	23	621	643	621	643	0.99
9	16	0.0037	0.37	12.1	0.2	1	23	649	671	649	671	0.98
10	16	0.00022	0.022	15.9	0.2	1	23	695	717	695	717	0.99
11	16	9.7e-06	0.00097	20.2	0.6	1	23	723	746	723	746	0.98
12	16	0.14	14	7.1	0.5	1	23	752	774	752	774	0.93
13	16	0.00068	0.067	14.4	0.8	1	23	780	802	780	802	0.98
14	16	3.9e-06	0.00039	21.4	2.4	1	23	808	830	808	830	0.97
15	16	3.8e-06	0.00037	21.5	1.6	1	23	836	858	836	858	0.98
16	16	3.6e-06	0.00036	21.5	1.4	2	23	865	886	864	886	0.95

Sequence Information

Coding Sequence: ATGTCCACATTCGCAGTTCAAGGGGATAATGTTGGATCTGAAGCCAATGAAATTAAGTTTGAAACAATGGAACAGAGTGCATTGTGTGTTGTGTCAGACACACCCCACATGAAAGAAGAAAGGAAGGACGTTAGTTCAATCATTGGCAGTAGCTTACAGTCAGTGAAGGACGGTGTTTATATTGGATCCGAGATGGCGGTAGGAAAAGCAGAGGAAATAGCAGTGGGGCAATCAGTTGTTAGCTGCCTGCAGACAATTGGTGCTGGAGGTGAAGCAGCCAATACAGTTTTGGATCCACTGGGCATAGTGATAGAGGAAGTGCACATAACGGAAGAAGTTCAGTGGGAACAGCAAGAGGTGCCATTCCACAGTCAACAAGAACATACTCCTTTCAATCAATTATGTCGTGTTTGTGCTTTAGAAACAGAAAATCTAGTGTCTGTATTTGGAGAAGAAGGCACAGAATTGCAGTTGGCAGGAAAGATACATTGGCATTTACCTATTGAAGTAAGAGAGGATGATAAATTGCCAGTGACAGTGTGCGCCTCCTGCATATCCAAATTGAACTCCTGTCATGAACTGGCCATATCATGTTTGAAAGCCAATGAAAAGCTGTGCAAACTCTTCAACGTACATGAAACAAATTTGACTGATTTTGGAGAAAAGAGTAATTTTGCAGCAACCCACTTGCAAATTAATAAAACATTGGATGCCTGTGATAAGACGTGTCTCTCCGGAGAAAACTTACATAAGGAGCCTAGTGTAGTGGCAACACAGAGATCTTCAAAGCGACCTACCCTGCCTGGTCATCAGTTGTCAAAGGCAATGGAACTCTTGAAGAAAGCGAAGGAAGGATGTGGGAAGAATGTCAGAAGTACACAAAGGACCAGGAATCATGGCCAGAAAACAAATACTATATTACCCAAGAATACGGCTACTGAAATGGAACAGTCGGGAGGTACCCATGATGCTGACAGTGAAGATGTAAAGATAAACAACGTTCTGTCCTATGACGACATGACACAAGACATTCAGGAATCTAATCCCACTCTCCCATTAACAAATGGTATTCAGACAAATGCATATGGTAGGCCACAACGACAAATTAAGAGGATATCTAGAGATTGTGACATGTTCCTGAAATCTAAGATGGTTGATGTAATTCAAGATCTAATGAGCAAGGAAGATGATGGTGAAGATGAGAGTAAGGAAAGGAAAAGAAGCATACGTCACAAGGAATGGAGGTGTGAAATTTGTGGACATGTGTTACTAAGAAAAACTGCATTAATCACACACCAGCAGCGAAAACATGGTCCACAGAATTTCTCTTGTAGCTACTGTGACAAAACTTTTCGCAATGCAATAGCAATGAAAGTACATGAACGGAGTCACACAAAGGTTGCTGCTGAAAGAATGGAGCCAACATCGTACATGTGTGAATTCTGTGGTAAGTCATTCCGAGGGAAGAAGACGCTGAAGGAACATCATCTAGCAAACCACAGTGATGACAAGCCTTATAAATGTGACAAATGTGACAGAAACTATGGTTCACTGGCCAGTCTTGACATTCACAAGGCCACCCATTCTACCGAAACTCCGTACCTCTGTGATCTGTGTGGTAAGAGCTTTAAGCATGTGAGCAATCTCCGCAGCCACAAGCGTTCACATATGGATGATTCTGATAAGAATCGCCAGGTATGTGATGTTTGTGGTAAGGGATTCCGGTCGAGGTTTCACTTGTCAGAACATATGAATGTGCATACTGGAAGGCGTCCATATGCATGTAACGTGTGTGGCAAACATTTCCACAAAAAGATTCAGCTTCGACAGCATGGTTCAGCACATTCTGGAACTCAGCCTTTCAGATGTCACCTGTGTGGTGTTCGGTTTAACCGGCGGGGAAACATGACACAGCACATAAAGCGTCATGACAGAGTACGCAAGTACACCTGCCGGGTATGCAATGAAGGCTTTGCTACACTGGGAGCTGTTCTGAGTCATCGCAAGAAACATACAAAAGAGGAGGTGGAGAACAGCATACGACAGCAGACAGGAACAGCAGATGACCCAGAGCAAGTGGCATACAAGTGTGAAGTATGTGGTAAGCTTCTTGCTAAAAAGGAATCTTTGGCCATCCACACACGCTCACATACAGGTGAGAAACCATTTGAATGTGGAGTGTGTGGAAAGAGGCTGAGCAACAAGGGTTCATTATCGTATCACATGCGCTCCTTCCACACAGGAGAAAGGCCTCATACATGCCAGTACTGTGGAGAAGGCTTCCTGTCGCGTGAAGCCCGTCTAGTGCATGAACGAATCCACACAGGAGAGAAACCGTATATATGTTCTGTATGTGGTATGGGCTTCCGATGCTCCAGTAATTTGGCCCAGCACTCGCGTGTTCATTCAGAGGCGCGGCCTCATCCATGTCCACATTGTGAAAAACGTTTCCAACGAAAGGGTGCTCTTGATGTACACATGCGCACTCATACAGGTGAGCGTCCCTATGCCTGTGACTTGTGTGGTCGACGATTCACCCAGAAGAATGACATGCTCAAACATCGCCGAACACATTCCCCAGACCGACCCTGCACTTGTCCTCAATGTGGCCAGGTATTTTCACAGAAACGTGAACTTGCTAAACATCAGTTGTTACATATAGCGACATCACAAACAGCAGTGCAGCATGTAATCAATCATTCACCCCCCACACAGACTGTTCTTATCACAACAGCTGATGGCCTCATCACGTATCCAGAAATAAATGTACCGGTCATGGAAAATGCTCAGACACTTATACTGCATAGGTACTAG
Protein Sequence: MSTFAVQGDNVGSEANEIKFETMEQSALCVVSDTPHMKEERKDVSSIIGSSLQSVKDGVYIGSEMAVGKAEEIAVGQSVVSCLQTIGAGGEAANTVLDPLGIVIEEVHITEEVQWEQQEVPFHSQQEHTPFNQLCRVCALETENLVSVFGEEGTELQLAGKIHWHLPIEVREDDKLPVTVCASCISKLNSCHELAISCLKANEKLCKLFNVHETNLTDFGEKSNFAATHLQINKTLDACDKTCLSGENLHKEPSVVATQRSSKRPTLPGHQLSKAMELLKKAKEGCGKNVRSTQRTRNHGQKTNTILPKNTATEMEQSGGTHDADSEDVKINNVLSYDDMTQDIQESNPTLPLTNGIQTNAYGRPQRQIKRISRDCDMFLKSKMVDVIQDLMSKEDDGEDESKERKRSIRHKEWRCEICGHVLLRKTALITHQQRKHGPQNFSCSYCDKTFRNAIAMKVHERSHTKVAAERMEPTSYMCEFCGKSFRGKKTLKEHHLANHSDDKPYKCDKCDRNYGSLASLDIHKATHSTETPYLCDLCGKSFKHVSNLRSHKRSHMDDSDKNRQVCDVCGKGFRSRFHLSEHMNVHTGRRPYACNVCGKHFHKKIQLRQHGSAHSGTQPFRCHLCGVRFNRRGNMTQHIKRHDRVRKYTCRVCNEGFATLGAVLSHRKKHTKEEVENSIRQQTGTADDPEQVAYKCEVCGKLLAKKESLAIHTRSHTGEKPFECGVCGKRLSNKGSLSYHMRSFHTGERPHTCQYCGEGFLSREARLVHERIHTGEKPYICSVCGMGFRCSSNLAQHSRVHSEARPHPCPHCEKRFQRKGALDVHMRTHTGERPYACDLCGRRFTQKNDMLKHRRTHSPDRPCTCPQCGQVFSQKRELAKHQLLHIATSQTAVQHVINHSPPTQTVLITTADGLITYPEINVPVMENAQTLILHRY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01567173;
90% Identity: -
80% Identity: -