Rluc031275.1
Basic Information
- Insect
- Reticulitermes lucifugus
- Gene Symbol
- Bgb_1
- Assembly
- GCA_026260175.1
- Location
- JAKCWW010000949.1:18829-36528[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-50 7.2e-46 156.6 0.3 1 96 33 127 33 140 0.92 2 2 0.28 4.2e+03 -2.0 0.0 92 110 180 198 167 202 0.81
Sequence Information
- Coding Sequence
- ATGCACGCTATGAACGATCCTGCGGCGCTGGCCGGAATGCTGCCGTTCGATTCCATCGGTCTGTACGAGCAACCCAAACCGCGCTTCATCTTCAAGATGCCTCGCGTCGTCCCCGATCAGAAGTCCAAGTTCGAGTCTGATGAGCTGTTTAGAAGGCTCAGCCGCGAAAGCGAGGTTCGGTATACAGGCTACAGGGACAGACCTCAGGAGGAGCGCCAAGTTCGCTTTCAGAACGGCTGTCGGGAAGGACACACGGAGATTGCGTTCGTGGCTACCGGAACCAATATCCAGCTCGTCTTCAACCCCAGCACGAACGGCTACAGCACGGCTGATCACGGGCGCGAGTGCGACTTCGATAAGGAACACGGCAAGGTAAGTCGAACAGCGCCCTGTTTTATCAGCATTCATAAAGCCAGGAGCCAGTTGTCATACTGCACAGCAAGGCTTATCAGCTCTTCATCTTCACACCCGCTGAGCGCAGACACGGGGGGTGCACCTGCATCACGCGACCTTAAAACTACACCGGATTTAACACGTTGTCAGGTGTTAATTCACAGTAAATTCTCTTTAAATTTCAAACTGGTCATCTGGGAATTTCGGCTGCCGTTTACGAGTTGGGAATTGACCAACAGAAGAGCAGTGGGTGGGCGAGGCATCCTTAAGTAG
- Protein Sequence
- MHAMNDPAALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRDRPQEERQVRFQNGCREGHTEIAFVATGTNIQLVFNPSTNGYSTADHGRECDFDKEHGKVSRTAPCFISIHKARSQLSYCTARLISSSSSHPLSADTGGAPASRDLKTTPDLTRCQVLIHSKFSLNFKLVIWEFRLPFTSWELTNRRAVGGRGILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -