Rmax001172.1
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- -
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000049.1:62614-65344[+]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.011 59 4.4 0.1 19 52 306 339 295 341 0.85 2 5 0.012 62 4.4 0.0 23 45 338 360 335 375 0.88 3 5 0.00046 2.5 8.9 0.0 21 51 426 456 418 458 0.83 4 5 0.0016 8.4 7.2 0.0 21 46 454 479 450 486 0.83 5 5 0.0048 26 5.6 0.1 21 44 540 563 530 591 0.89
Sequence Information
- Coding Sequence
- ATGacaacaatatttattgaaaattttgataaaatatgcCGTTGTTGTTTATGTAAAAATGGAGAGATGCGACCATTGTTCGGGAGTAGTCTCGATAACATGTTGCGATTAGTTGCTGAAATTAATatacaAGCTGGCGATGGATTACCCGAATTAATGTGTGTTCCATGCGTATTGCAAGTGAGTCGAGCGTTTACATTCAAACAACAATGCCAACGATCTGATCAAACTTTGAGGTCATTTCTTGATAAAGCCgggaaattcaatgaaacgcacaacaacaatattagTGAAAATTATAACAGTATTACGTCAAATGAAAACGACGACAATGATGAAAcacaaaacatcaaaaatgaaattgtaatcgATACAATTTCAGAAAGTATTATCAAAGAACATCCATTCACATCGAATGATGAAATAGAATCAGATCATTTAGATAGCGAATTAGTTTTGGGATCTCttgaagaagaaattgaattatctAGTCTTCCAAGtgaaacacaattttcacCAGTTGCTGCTGAAGAAATCGAACAACATttagcaaatgaaattttaattaatgaaaatgaaaaagagaaacatttATCGACAAAATTTGGTGATTACTTTGATGGAATCAAATTGGATGTTGCACAAGTCGTATCACTTACGGATGGTGAATTGCCTGTGCAAACAAACGAAGAGACATTTGATGAAATTCCAGCAGATGAAAGTGAATGTGAAGATAAAAGAATACCTTCAGATGAATTTATACAAGATATTTTATCCGAAGAGAAAATTGATACGACGTTCAATTGTACCATTTGTACACTTGATTTTGAAACAGAGGATAAATTTAACGCCCATGTACAGTCAgcacattcaaataaaaccgcaaaaaattctaaaacgattgatgtaaataaaagtgatacgaacaattcatttgaatgtacAGAGTGCCATAAAGTTTTTGCAGaaaggaaaatattgaaacgtcatttaaaaattcacaGTCCAATCAAACCACATTCTTGTCCCGAATGTGATATGTCATTTGCAGAGAGTTCGAATTTATCGaaacacatgaaaaaacaTACGGGCGAACTAAGGAACGTTGTCGGTAAACCAAATCTATGTTCACATTGCGGAAAAGCATTTAAATGGGCCTCATCTTTGTCAAAACATATGAAACATCATACAAGgcataaaattttaaattgtccaTACTGTCCAAAGTATTATGTTGAAGCTAGatcattgaatattcatatgCGATCACATACTGGAGAGAAACCATTCGTATGTGATGTTTGTCACAAAGGATTCACACAGTATGGAAACTTGGAGAAACATTTAAGGGTCCACACTGGCGAAAAGCCATTTTCGTGTCCAATTTGTAATAAAGgTTTCTCACAAAGTGGCTATGTAGCGATACATCTGAGAACTCATACTGGTGAAAAGCCTTATCGCTgtgatgttgaaaattgtgGCAGAGCATTTGCTGGCAGTAATACGCTTGCAATTCATAAAAGAACTCACACTGGTGAGAGGCCGTATCCTTGTCAATTATGTGATAAAACATTTGCACGTCAAGAAACGGCAAATATTCATCAACGAACGCACACCGGCGAAAAGccattttgttgtaaaatttgCTATCGTGGATTCACAAGTTCGGGCCATTTGACATCCCATATGCGCAGTCACAGTGGCACAAAAACTCATGAATGCAATGTGTGCCAAAAACGGTTTGCGGGCAGTAGTAGCCTAAAAGTTCATATGAAATCTCATGCTGAGAAAGAAGCTCAACAACAACTGCAGCAACATCAGCAGGAGCATGAGCAGGAACATGAACAAGAACAAGAGCAAGAGACGCAACAAATTTACGGTGTTAAAACAACAGTATTTGAGTGTAATATgtgcaaaatgaatattccaTCATTGGCACTAACATCACCGGACGAATTGCAAGCCTATAATCACGAATTTATCGATgatgttttaatttgttcaaatgttgCATCAATCTTAGATAATGGGAAAATCATCGAAGAAATTCATGATGAAAATGGTACGAATATTATTCTAACCACTGCAACTGACATCGAAAATGGGCaacaattattaattaatttgtcGGATTTGAAGTAA
- Protein Sequence
- MTTIFIENFDKICRCCLCKNGEMRPLFGSSLDNMLRLVAEINIQAGDGLPELMCVPCVLQVSRAFTFKQQCQRSDQTLRSFLDKAGKFNETHNNNISENYNSITSNENDDNDETQNIKNEIVIDTISESIIKEHPFTSNDEIESDHLDSELVLGSLEEEIELSSLPSETQFSPVAAEEIEQHLANEILINENEKEKHLSTKFGDYFDGIKLDVAQVVSLTDGELPVQTNEETFDEIPADESECEDKRIPSDEFIQDILSEEKIDTTFNCTICTLDFETEDKFNAHVQSAHSNKTAKNSKTIDVNKSDTNNSFECTECHKVFAERKILKRHLKIHSPIKPHSCPECDMSFAESSNLSKHMKKHTGELRNVVGKPNLCSHCGKAFKWASSLSKHMKHHTRHKILNCPYCPKYYVEARSLNIHMRSHTGEKPFVCDVCHKGFTQYGNLEKHLRVHTGEKPFSCPICNKGFSQSGYVAIHLRTHTGEKPYRCDVENCGRAFAGSNTLAIHKRTHTGERPYPCQLCDKTFARQETANIHQRTHTGEKPFCCKICYRGFTSSGHLTSHMRSHSGTKTHECNVCQKRFAGSSSLKVHMKSHAEKEAQQQLQQHQQEHEQEHEQEQEQETQQIYGVKTTVFECNMCKMNIPSLALTSPDELQAYNHEFIDDVLICSNVASILDNGKIIEEIHDENGTNIILTTATDIENGQQLLINLSDLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01288414;
- 90% Identity
- iTF_01288414;
- 80% Identity
- iTF_01288414;