Rmax022377.1
Basic Information
- Insect
- Resseliella maxima
- Gene Symbol
- -
- Assembly
- GCA_029041755.1
- Location
- JAQOWM010000928.1:718016-722938[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.3 1.3e+02 3.9 0.3 2 23 6 27 5 27 0.93 2 14 0.011 1 10.5 0.2 1 23 899 922 899 922 0.95 3 14 0.012 1.1 10.4 0.3 1 23 1019 1041 1019 1041 0.98 4 14 2.3e-05 0.0021 18.9 1.2 2 23 1044 1065 1044 1065 0.97 5 14 0.029 2.8 9.1 3.0 1 23 1071 1093 1071 1093 0.95 6 14 0.0027 0.25 12.4 5.3 2 23 1100 1121 1099 1122 0.94 7 14 1.2 1.1e+02 4.1 0.5 6 23 1136 1153 1134 1153 0.97 8 14 0.0029 0.27 12.3 4.9 3 23 1160 1181 1158 1181 0.95 9 14 0.004 0.38 11.9 0.8 2 23 1194 1214 1193 1214 0.95 10 14 9.8e-05 0.0093 16.9 0.7 1 20 1221 1240 1221 1243 0.94 11 14 2.5e-06 0.00024 21.9 1.1 1 23 1251 1273 1251 1273 0.99 12 14 0.00015 0.014 16.4 5.3 1 23 1279 1301 1279 1301 0.98 13 14 6.4e-05 0.006 17.5 3.5 1 23 1307 1329 1307 1329 0.98 14 14 0.007 0.66 11.1 4.3 1 23 1335 1357 1335 1358 0.95
Sequence Information
- Coding Sequence
- atggATTCACAAATACAATGTCCAGTTTGTACACTTTATCTCCATGTTGGAATGAATTTACAAGATCATTTAAATACACATCCAAAAGATCAGGTTATATCGGCATTAGTCAATATGACATTATTACAACAACGGGCCaatgatgaaaattccaaCAGTTTTGAATGCAGTCGTTACGAACCATTGGCAACCAGTGATGATCTCAATTCGTCTACGGACAAATCGCTTCCAAAagcatttcaaaatcaacaacaatctATTACATATTTTGCACCAATTTCACAGCAAACATCacatcaattgatgattgtaaATGGTACGCAAGTCTTTCACGACCAACGcCATCGACGCATTGGCGTCACATCACATCAAAGTTGTTCCACACCGATTTCACATCGCACCGGCACCGTGCCACCATTATCAATCCCAACAACATTTCGACTGATTCCAGCAAAGCAATCAataccaccaccaccaccatatCATGCATCTGTTCGAAACGCAATACATCGTaatgaaatcaatcaaatcacCACACAAATTCAGCAAAGCTGTTcaacaaatgttttcaatgtatCTGCATCAAGTAGCAGCACTTTAACAACCAATATAAATGCCTCAAGTAGTGCAGTATTTGTGAATCAAAATGCAGCAAAACATGTGGAGGGATGTAACGAAACCGAGCCTTATGGAAAGGAACAATCGAACGCTGATGACATTTCAATGAGCAATGATTTTGAAACGGAAAATGAACATGCGCATGTAcgcgaacatgaacatgaacatgaacatgaacatgaacatgaaattgaatttaactcAAGATGTAACGAAGATGAAAATGAGCTTGATAATTGTAATGAAATACAAAGTGGGAGAGCCGGCAATAATGATGAATTACATAACGTTGtacaacaaaaccaacaacaacaagaacaaaattCGAGTAAAGAAAGTGTTCTAAATGAGCCAACAATTGATTTAGCTAATAAAGAGCCGAACATTTTTAAGAAAGAAACAATCGATTTAGCATTTATTGATGCTGATAACGCTAATGATaatgatagaaagaaaaaaggtCTCAAAGTTTTGAGCAATATTCAGGTATCACCAAATGCTATACTAAACGTATCATTGAATACACCAAACAGTGAAACAATTCCACTGAATAACATGATAATTGTCAGTTCAATACCATCCACATCAACTGGAACTACCTCACAAACGCCACCGACCCAATTGccGAGAGTGGTCTCAACTTCAGATAAGCAAAAAACTACTGATATCGAAGAAGAAATACAACTAGTTGATCTAATTTCGCTAGACGAAAGAAATATCAGCGATGAATGTTTCGTGAAACCGTGTTCAAGTAAAGCGACTAGTGTAATTCGTTTAGCATCTCAAAAATCTCCAAAGCCATCTTCGTCAACCGAAGGTGTGCGACCGAATACAAATCGTCAATCGGTAAAAAAATTGgttgtgaaattaaaaaaaccatttgttcCAGTTATTGAAGAAGAAGCTAATTTGCATCCGCCGGatgaacattttgataatCGATCGGTAAACAATTCGTTTGAgtcttcaaataaaaatgaaaatgaaatgttgctTGAATGTTCTGAAGATGTTCCATTTAGTCCACTTCGTCAATCATATACACCACTTCCATTGAATCAAATGCATggtaatgatgatgatgatgatgaggaggaggaggaggaggatgATTTAATAATTCCCGATTGCAAtccattaaatcaaaattgttcgAATGATTCGggaaatgaaatgcatattattgatatcaaattgaatgaactaAAAGCGAATGGTTCAAATATAGTTGAGCAACCATCtaatgagaatgaaaacgcaaatgaaaatggaaatgtggATATGTCAATTAGCAAAGAAGATGTCGTACTTTTCACAATTAATACAATTAGTGGAGAAGGGAATATCGATACAACGGATGAAACTCATATCACTGCAGCAAAAACATATTtagaaaaatcatcaacaacaacaacaaccagtTCTGAATGCACCTCATATGCGTCATCTTCGTCAGTATCAAATCCAGGATTAGGTtcatcacaaaatgaaatccatAGCATTGCTGGCACCAGCCGTATGGAATATGGTCTAACTACATTCTTAGATTACAACGAACAACGTTTACGCGTAAGATTGTCGCCAATACCATTTGTAGCCGATAACAATACATGGAATCAAACGTTCAGTTCGTCATACGCATCGGGGTGTGATGAAAATTATAAGCATTGCATGGACATGGATGGTAGcaaaaccaattcaattaatgCACGCGCTCCATCAACCGACAGTCTTAACATTCGAACTGATGAAAAGATGCCAGCCAAAGGTGAAATTTCAGAACAGGAAAGCAATGGTGATGTAGAAGGTTTATGGAGTCATCAGGTGTATGCGACTGAGAATGATAATATGCCAAGATACACAAATTCATACGACACAACTGTGGCTCGCGAAAGTTGGAGTTTGAGTAATGAGCAAAATCTATCacatgaaatggaaaatatgtcaacaattttaatgaaattCAGTTCGTTGGAGCAATCGGATCGTAATATGGATATAAAGCCATTTGTTGGCAACagcatttgcaatgaaaaagaTTTATTGAAATCGAAATCGTTGACAAAAGCGAGAAAATATCGTTGCCCGATGTGCGCACAAATTTTTTCAACGCTAAAAGAAAAACGTgcacatttaattcaaatccATGATATTCAACAGGGTGTTGTTGTAACAAAAACAGCCgccaaaacaatgaaattcaccaaaatcaaaaaaccCACCGAAACAATAACCAGCGCAAGCTGTTCAACGCTGGACACAACGGCAACGCCTGTGATCGAGTGTAAGAAAGAGCGTACGGAAACAATGAGACCGTTCACCAGTCTCAATAATTATCTTTTAAGTTATAATTGGTCGACATTAAAATCGCGTCCAACTGACGGAACAAAGGATGAGAATAAAACGCTATTTGAAATACTTGACAGCGGTGTGAATTATGTGTGCAAAGTGTGTGAAGAGCAATTCAACAGTATTCGAGCGTATGATATGCATATGACAACTCATCCAGCTGAATGTTATACGTGTGGTCGTACATTTAAGCGTTGGGTCAATTTCAGTATTCATTTGAAACGCCACTTGAATATACGTGAACACCGTTGCATCCATTGTCCGAAACGATTTGTGCTACGACAAAGCATGATCGAACATATGCGAATTCATAGCAATGAGGCACCATTAAAGTGCAGCTTGTGCATGAAACGCTTTAAGCGATTTTCAAACTTAATCCAACATCGTAATCgacatcatttaaaattacgGCCACAGGCCAAGGATTTTATATGTTCTTGCGGTGAAGTATTTCATTCGCAAGCAAAAATTGCATGGCATCGTGAAACACATGACGTTAAACCAAAATGTTGTCCATATTGTCGTGAACGTTTCATGCATAAAAATAGCCTAGTGCGACACATTCGATTATCGCATACGGaacgatttcatttattcaaacgtGATTCAGTTGAATGTCCGTattgtaaaaagaaatatatcaAATCTAGTCTCAAAATGCATATGGAACAGCATAAAACATCTCGAACCACATATGAATGTACGATATGTAATAAAACGCTTACAAcgaaatggaatttaaaacAACACAAATGGATACATGCCAGTCGATCGTCAAAGCCATTTAAATGTAATATGTGCACGAAAGCATTTATACGCGAAAGTGAATACATTTCACACATGAATACGCACAAAGCGATTAAACCATACACTTGCGATCATTGCGGATGCCAATTTGCACGGAAATACAATTGGTTGCGGCACACACGTGAACATGAAACACTTAAGAAATTTCGTTGTGATACATGTGGCAAGGACTTCCATCGAGCATATTATTTAAAAGAGCATAAACGCATTCATACAGGTGAGCGACCATTTGAATGCGTTATTTGTGGAAAAACATctacaacaaaaaccaatcacaatAAACATGTGAAAATTCATCATGCTCGCGATCCGCTCACAGCTGAagcatga
- Protein Sequence
- MDSQIQCPVCTLYLHVGMNLQDHLNTHPKDQVISALVNMTLLQQRANDENSNSFECSRYEPLATSDDLNSSTDKSLPKAFQNQQQSITYFAPISQQTSHQLMIVNGTQVFHDQRHRRIGVTSHQSCSTPISHRTGTVPPLSIPTTFRLIPAKQSIPPPPPYHASVRNAIHRNEINQITTQIQQSCSTNVFNVSASSSSTLTTNINASSSAVFVNQNAAKHVEGCNETEPYGKEQSNADDISMSNDFETENEHAHVREHEHEHEHEHEHEIEFNSRCNEDENELDNCNEIQSGRAGNNDELHNVVQQNQQQQEQNSSKESVLNEPTIDLANKEPNIFKKETIDLAFIDADNANDNDRKKKGLKVLSNIQVSPNAILNVSLNTPNSETIPLNNMIIVSSIPSTSTGTTSQTPPTQLPRVVSTSDKQKTTDIEEEIQLVDLISLDERNISDECFVKPCSSKATSVIRLASQKSPKPSSSTEGVRPNTNRQSVKKLVVKLKKPFVPVIEEEANLHPPDEHFDNRSVNNSFESSNKNENEMLLECSEDVPFSPLRQSYTPLPLNQMHGNDDDDDEEEEEEDDLIIPDCNPLNQNCSNDSGNEMHIIDIKLNELKANGSNIVEQPSNENENANENGNVDMSISKEDVVLFTINTISGEGNIDTTDETHITAAKTYLEKSSTTTTTSSECTSYASSSSVSNPGLGSSQNEIHSIAGTSRMEYGLTTFLDYNEQRLRVRLSPIPFVADNNTWNQTFSSSYASGCDENYKHCMDMDGSKTNSINARAPSTDSLNIRTDEKMPAKGEISEQESNGDVEGLWSHQVYATENDNMPRYTNSYDTTVARESWSLSNEQNLSHEMENMSTILMKFSSLEQSDRNMDIKPFVGNSICNEKDLLKSKSLTKARKYRCPMCAQIFSTLKEKRAHLIQIHDIQQGVVVTKTAAKTMKFTKIKKPTETITSASCSTLDTTATPVIECKKERTETMRPFTSLNNYLLSYNWSTLKSRPTDGTKDENKTLFEILDSGVNYVCKVCEEQFNSIRAYDMHMTTHPAECYTCGRTFKRWVNFSIHLKRHLNIREHRCIHCPKRFVLRQSMIEHMRIHSNEAPLKCSLCMKRFKRFSNLIQHRNRHHLKLRPQAKDFICSCGEVFHSQAKIAWHRETHDVKPKCCPYCRERFMHKNSLVRHIRLSHTERFHLFKRDSVECPYCKKKYIKSSLKMHMEQHKTSRTTYECTICNKTLTTKWNLKQHKWIHASRSSKPFKCNMCTKAFIRESEYISHMNTHKAIKPYTCDHCGCQFARKYNWLRHTREHETLKKFRCDTCGKDFHRAYYLKEHKRIHTGERPFECVICGKTSTTKTNHNKHVKIHHARDPLTAEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00367504;
- 90% Identity
- -
- 80% Identity
- -