Basic Information

Gene Symbol
dmd-4
Assembly
GCA_029041755.1
Location
JAQOWM010000628.1:40164-42653[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4e-25 1.6e-21 76.4 10.7 1 47 32 78 32 78 0.98
2 2 0.06 4e+02 1.5 0.9 20 32 246 259 245 260 0.78

Sequence Information

Coding Sequence
atgttaacagtttcatcgatgaaaaaaagtgaaaaaattaaacaattaaatatgGAGTCGTCAGTATCAaagcaaaaatgtttaaacaatGTGCGTGTACCAAAATGTGCACGGTGCCGTAATCATGGTGTTATTTCGGGTTTGCGTGGACACAAGAAAAATTGTTCGTATCGAAATTGTCGGTGCGCAAAGTGTGAATTAATTTATGAACGACAGCGTATTATGGCTGCACAGGTTGCGTTGAAACGTCAACAGGCTGTCGAAGATGCAATTGCAATGCGATTGGTGTCGAATGAAACGGGCAAGAAAATCGATGAATTGCCGCCGGGCAAAATATTTGGCATGTCCATATCCGAATCGTGTAATATGCCAGCGAATTCAAGTGGCATCGAAAATCTGTCGCTGGTGCAGAAAACCAAAAATCCTGCAAGCGCATCGGACGATATGCGAAGCGTATCCGAAAGTGCACTTGATATGTTGGCACATCTATTTCCACACCGTAAACGATCTGTACTTGAATTAATCTTGCGTCGATGTGATTTGGATTTGCTGAAAGCGATTGAACAATGTCGGCCAGCACCTAGCGCATTTAAACCAGTCTCAAAACCAACAACTATACAACAAAATGTACATCAAGCCTCAACATCATTGGATGGACGACCACATTTCACACCGATGCTTGCATATCCAAAATGGTTATTTCCAATGACAATACCATTTACAATGGGAATTCCACATAATTCATCTTGTGTATTCACCAATTGCCCGATGTGCGAGAAATATTAA
Protein Sequence
MLTVSSMKKSEKIKQLNMESSVSKQKCLNNVRVPKCARCRNHGVISGLRGHKKNCSYRNCRCAKCELIYERQRIMAAQVALKRQQAVEDAIAMRLVSNETGKKIDELPPGKIFGMSISESCNMPANSSGIENLSLVQKTKNPASASDDMRSVSESALDMLAHLFPHRKRSVLELILRRCDLDLLKAIEQCRPAPSAFKPVSKPTTIQQNVHQASTSLDGRPHFTPMLAYPKWLFPMTIPFTMGIPHNSSCVFTNCPMCEKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00133276;
90% Identity
-
80% Identity
-