Basic Information

Gene Symbol
ARID5B
Assembly
GCA_029041755.1
Location
JAQOWM010000469.1:7605-16252[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.8e-15 2.9e-11 44.2 0.3 2 89 472 551 471 551 0.89

Sequence Information

Coding Sequence
atgatatatcAAGAGCAATTTTGTGATAAATGCACATCAAAAGTGATTGGTGAACCGTGCGGATCTCATGGTCCATACATATTTTACAAAGGTATCCGAATATCACCGTTATCGCCATCATTATTATCTTCATCATCAGCAAACGAGTATGAATATCATTgtgtcaaaaataataattgcttCGATGGCATCGATCACAGAACAGCCGAATTGCTTCGCTCGAATGATACTATCATCAAAACTATCAAGCATGAGTATGATTCGGAATCATCCTTGGGTAGCTGTGATGATTTACCACTGCCACGACAAATTACTCATAAAACAGATATCAAACCACGATTATTTGCTGAATGCTATAAGAAACCGTTAGTGTTGGCACTTGGTGATTGCATTCCAGTTCGGCCATGGTCAGACTCACCAATCGCTTGTATAGCCGAATTGCGTATGGTTTGGCGTGATAAGAGTGAACAATGTCTGTTGACTAGCCTTCGATTGTATTTTTTACCTGAAAACACTCCAATGGGTCGAAATTGTCACGGAGAGgATGAAGTGCTGGCGATTTCTGAGCGTGTTGTAATACGAGCAGACGACCTACTAAATTGGTGTGATGATACAATTAATTGGACCTATGGATTACGTGCAAATACACTTCTCGATccaatgataaaaaatgaaacgaccGCCGATAATGTGAATTCGCaaaccaatttcaataaaagcGGAAGTGATCCATGTTTTGACAAcatttcaagtaaaaatgtacgctccctgaaaaattccaaattggatttttctgaagtggaaaaagaaaaagAAATGCATTCTCGGTCGAATGTTGCAGTGATCAGTTTTCCGCGTTATTGCCGCTATCGAGCTACTTTAAAGCGGCTCGAGGGTGTCAGCGATGAATGGCTTCGACGAACATTAGTGCAGGCACTGTGCGGTTTCGTTTCATACGGGCCAGATACGAAAGTTATGTTTTGCAAAGAAACATTTGACTATCCTGAATTGGAAACTCATGAGCTTTTGTGTAATCATTTGGCACCAAAATTAAAAGGTCGTCCTCGTGGTCGTCGGAAGAAGGTTCGTTCTGATTCGCCATCGTCTCGTATCCGTTGTGATTCAGCTGGTTCTGATTCATGTGATTCGGAAATATCGGCATGTTCAGTGGAAaaagtttattcaaaatattcaccaCTTTATGTGAAACCAGAATTTAAACAAGGTAAACAGGTGTTGGCTACTCGACCAAAATTGCGTTACAATCCAAGACCGGCACgaagaaatcaaaaatccGAATCAGCTGACGGAATGCGCACATCGAGACGCAACAGTGATAGCAGCGATACAAATGACAGtgattcaaatacaaatacaacaaatcaggacgatgatgaaaatgaatcatcaGAAGAATTGGAATTCATACAAAAGCTAATTGGTTTCCATGAGGCACAAGATTCACAAATACCAAAAGTATTTTGGGTCGGTTTGAAGCGTGTCAATTTGctatcaatttatcaaaaagtaaaaaaaatgggCGGCTATGAAATGGTCACCGAGCGGAAAATGtggaaatatttgtttggTATTGATGGTGGTTACAATTCAATATCTCGGAAAAAGTATGAACGCGCATTGTTGCCATACGAAAAGTATGAATTGCGTAAAGAGTATGCTGAACGACGTGCCAAATATGGTCAAGATGATGATAACggtttttatgattttgaaaagCATCTTGAGGGAAATCGACGACTGACTGAAGCTGAAATACACGAAATTCAACGtcacatcaaaatgaatgaatcaagaAAGGAGAAAGATCAAAATCTTCATGTTGATTTGACACCGGGATCATTACCAGTTACTGTAATTGTTGgtaataaaaaatcaacatcaccatcacaatttcaaattcaacagCCACACACCACAATTACAGTTCATCAAACAACAATACATCCGCAGTCGTCATCAGTGCGAAATAGTCCACCAAATAATCCGATTCAGataacaaatcaaatacaaattcaacaatttacatTACAACCCGGTTCATCACAAAAGGATGACGGAATTAGCGGAAAGCGTAAATCGTCTAGCGAAGATTACTCGGCATGCGATGCACATTTTGTGGCCAATCATTTAGCAAAATTAGGCAAAACAACATCATTACGACAAGTACGTTTGCGACCAGATCGTCAACGCGATCGAAAGTCGGACGCGATGTCACCACCATCGATTGGTTCGATAACGGTATCAGCgataaaaccaaatgaaaaagaaaacattccaTATTTGAGCGgttcaaaaacaacaacaataacaccaATACTCGGCAATAGCAACAAAACGCTACGATATCCCAATCCAAATGATGTCATCGATTTGGACAGTGACAATGAAGACAGTTCACCACAAACCCATATGTATACCTGTGGAATTTTTCCgaatatgaagaaaagaaaattagaaattCTTCGTCAAGGTGGATTAGAAGTTAGAGCCATCAGTAATTCAAGTGGTCCAATGAATAATCAGAATTTCCATGGTTCAACATCGACAACTGTCCCACCGACAACGAAtgtatcaaaattgaaaaacaatttaaaaattagtACCTTATTGACTGATGCACACATTGATTTGCCATTGCCAAAATTCCAATCCCAATGCATGTACAAACGAACAACACGTATTTTTGGCAATCCAAAAGATTTAATACCGCTTCCAATGCAAGCAACcgaattaaattgtattgatttaaCGGTAGAAAAATGTGAACCAAATCTACCAATTGGTCTTCGTTTACCACAATCGACAACCATTCAAAAGGCGCATTCATCGCCCGTATCGACTCTCACCACGTTACCCTCGGCCGCATTGGCTGCACAAAAAATAACCGATCCAAATCTACAAATAACGCTCGTACCTCCATTATCGCATGCGCATAATTCGCATGGTCAACACAACAATAAACGTAAATCATCGGAAACTAATAAATTGTTGAGTGGCATGAAAATGTCACTTCCATCATCGTtaaccacaacaacaattggtaattttccaaatcatCATTCGGATGACACATCGCCCGGTGCCAGCTCATCATCGCCATCATTATTAAATATCtcaaatttatcaacaatcaatgataatttaaaGATCAATCAacttttattacaaaatttccTAAATCAATCAACCGCAAATACCCAACCTGAACAACCGTCAAAGGAGCAAAGCACAAATCCATTCCTGATGTTGGATCCAATGTATCTAACCGGTCTCTACAATAATCCCAAtctttttttccaacaatCACTTCCACAAGAGCTACTTCAGCTCTATAAAAATTTTCCCCAAGGCTTAGGCATTATTCCGATCTCAAAAAGTTAA
Protein Sequence
MIYQEQFCDKCTSKVIGEPCGSHGPYIFYKGIRISPLSPSLLSSSSANEYEYHCVKNNNCFDGIDHRTAELLRSNDTIIKTIKHEYDSESSLGSCDDLPLPRQITHKTDIKPRLFAECYKKPLVLALGDCIPVRPWSDSPIACIAELRMVWRDKSEQCLLTSLRLYFLPENTPMGRNCHGEDEVLAISERVVIRADDLLNWCDDTINWTYGLRANTLLDPMIKNETTADNVNSQTNFNKSGSDPCFDNISSKNVRSLKNSKLDFSEVEKEKEMHSRSNVAVISFPRYCRYRATLKRLEGVSDEWLRRTLVQALCGFVSYGPDTKVMFCKETFDYPELETHELLCNHLAPKLKGRPRGRRKKVRSDSPSSRIRCDSAGSDSCDSEISACSVEKVYSKYSPLYVKPEFKQGKQVLATRPKLRYNPRPARRNQKSESADGMRTSRRNSDSSDTNDSDSNTNTTNQDDDENESSEELEFIQKLIGFHEAQDSQIPKVFWVGLKRVNLLSIYQKVKKMGGYEMVTERKMWKYLFGIDGGYNSISRKKYERALLPYEKYELRKEYAERRAKYGQDDDNGFYDFEKHLEGNRRLTEAEIHEIQRHIKMNESRKEKDQNLHVDLTPGSLPVTVIVGNKKSTSPSQFQIQQPHTTITVHQTTIHPQSSSVRNSPPNNPIQITNQIQIQQFTLQPGSSQKDDGISGKRKSSSEDYSACDAHFVANHLAKLGKTTSLRQVRLRPDRQRDRKSDAMSPPSIGSITVSAIKPNEKENIPYLSGSKTTTITPILGNSNKTLRYPNPNDVIDLDSDNEDSSPQTHMYTCGIFPNMKKRKLEILRQGGLEVRAISNSSGPMNNQNFHGSTSTTVPPTTNVSKLKNNLKISTLLTDAHIDLPLPKFQSQCMYKRTTRIFGNPKDLIPLPMQATELNCIDLTVEKCEPNLPIGLRLPQSTTIQKAHSSPVSTLTTLPSAALAAQKITDPNLQITLVPPLSHAHNSHGQHNNKRKSSETNKLLSGMKMSLPSSLTTTTIGNFPNHHSDDTSPGASSSSPSLLNISNLSTINDNLKINQLLLQNFLNQSTANTQPEQPSKEQSTNPFLMLDPMYLTGLYNNPNLFFQQSLPQELLQLYKNFPQGLGIIPISKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00367010;
90% Identity
-
80% Identity
-