Cnas001541.1
Basic Information
- Insect
- Contarinia nasturtii
- Gene Symbol
- ARID5B
- Assembly
- GCA_009176525.2
- Location
- NW:2156275-2184189[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-15 1e-11 44.7 0.2 2 89 480 559 479 559 0.89
Sequence Information
- Coding Sequence
- ATGGAAGTTAAGgTGATTGGCGAACCGTGCGGATATCATGGTccatacacattttataaaGGCATTCGAATATCACCGttttcgtcgtcatcatcatcgccaGCGTCTTCGTTATCGGTGACAGCAACGGTTGCAGCCACAAACAACGTCTATGAAAATCATtgtttcaaagaaaataattgctTTGATGGCATCGATCGAAAAACGGCCGAATTATTACGTTCAAATGACACCATCATAAAATCCATCAAGCATGAATACGATTCGGAATCATCATCCGATTGCAGCGATGGACTGGCATTGCCACaacgaaaattcaacaaaacagATGTCAAACCACGACTATTAGCCGAATGCTATAAGAAACCGTTAGTATTGGCACTTGGTGATTGCATTCCGGTTCGGCCATGGTCAGATTCGCCAATTGCATGCATTGCTGAGCTGCGTATGGTATGGCGTGATAAAAACGAACAATGTCTGTTGACTAGCCTTCGATTGTATTTTCTGCCCGAAAACACGCCAATTGGTCGTAATTGCCATGGAGAGGATGAAGTGTTGGCGATTTCCGAGCGCGTTGTAATTAGAGCAGACGATCTACTGAACTGGTGTGACGATACAATTAATTGGACCTATGGATTACGTGCAAATACGCTTCTCGATCCATCGATAAAAACTGAAGCAAAACACGATGTTAATAAATGTGACAACAATTTACCAACCAACGttcataataaaaacgaaaatgatgcAGATTTTGATAGCATTTCCACGTCAAATATTCGATCGctgaaaaattccaaattgaattttactgaagtggaaaaagaaaaagaaACGTATTCCCGGTCGAATGTTGCAGTGATCAGTTTTCCACGGTATTGCCGTTATCGAGCTACGCTAAAACGGCTTGAAGGCGTTGGCGACGAATGGCTACGACAGACATTAGTGCAGGCACTTTGCGGTTTTGTTTCATACGGACCGGACACAAGAGTTATGTTTTGCAAGGAAACATTTGACTATCCCGAATTGGAAACGCATGAGCTTTTGTGTAATCATTTGGCGCCAAAATTGAAAGGTCGTCCACGTGGTCGTAGAAAGAAGGTTCGTTCGGATTCACCATCATCGCGTATCCGTTGTGATTCAGCTGGTTCTGATTCATGCGATTCCGAAATATCGGCATGTTCGGTGGAAAAAGtctattcaaaatattcaccaTTGTATGTTAAGCCCGAATTTAAACAAGGCAAACAAGTGCTGGCCACAAGACCAAAACTTCGTTACAATCCACGACCGGCACGAACGAAACTTAAATCGGAATCGGCCGATGGTATACGGTCATCGCGACGGGCTACAAACAGCGATAGCAGCGATTCAAATGACAGTGATTCGAATACAAACACAACGAATCAagacgatgatgaaaatgaatcgtCGGAGGAATCGGAATTCATACAAAAGCTGATTGGTTTTCATGAAGCACAAGATTCACAAATTCCAAAAGTGTTTTGGATCGGTTTGCGGCGCGTCAATTTATTGTCGATTTAtcaaaaagtgagaaaaatggGCGGCTATGAAATGGTCACCGAACgaaaaatgtggaaatatttatttggcgTTGATGGTGGCTACAATTCAATATCacgcaaaaaatatgaacgtGCATTGTTGCCATACGAAAAGTATGAAATGCGCAAAGAATATGCGGAACGATGTGCAAAGTATGGAAAAGACGTTGTTGATCGAAATAGTGGCTACAATTTTGAACAGCATCTTATCGATGGTAATCGACGATTGACCGAAGCTGAAATACTTGAAATTCAACGGCAAATTAAATTGCAAGAAGcgcgaaaagaaaaagatcAAAATTTACATGTAGATTTATCGTCTGGCTCATTACCGGTTACCGTTATTGTTGGTAATAAAAAGTCAACGTCACcatcacaatttcaaattcaacaacCGCATACCACAATTACCGTACATCAGACGACAATTCATCCACAATCGTCAATGGTGCGAACCAGTCCGCCAAATAATCCCattcaaataacaaatcaaatacaaatacaacaattCACAGTACAACCGGGTTCATCGAAAAAAGACGATGGTCTGAGTGGCAAACGTAAATTTTCCATCGACGAATATTCAGCGCGTGATGCAAATTTCGTGGCCAATCATTTGGCAAAATTggGTAAAACAACGTCATTGCGACAGGTTCGCTTACGACCCGATCGGCAACGAGATCGTAAATCGGGTGTCACATCACCGCCATCAATTGGTTCGATTACCGTGTCGGCgataaaaccaaatgaaaaagaaaacattccATATTTGAGCGGTTCAAAGACGACAACAATAACGCCGATTCTTGGTAATAGCAACAAATCGTTGCGTTATCCAAATTCAATGTCCGACGTTATCGATTTGGATAGTGACAATGAAGACAGTCAATCACCGCCACAATCACATTTGTATTCGGGCGGAGCCATGTTTCCGAAtatgaaaaaacgaaaattagaTATTCTTCGACAAGGTGGTCTTGAGGTGACGGCCATTAGTAATTCCGGTGGTCCGGTGAATAATCAAAGTGTTCATGGTTCAACATCAACGTCATCAGCACAACCGGTGAATGTTTCAAAAGTGAAAACCACTTCAAAAATCAATGCATCATTGACGGGTGCACATATTGATGTGCCATTACCAAAATTCCAATCGCAATGCATGTACAAACGTACTACACGAATCTTTGGCAATCCAAAAGATTTAATACCGTTGCCAACGCAAACCACCGAATACAATTGCATCGATTTAACGGTGGAAAAGTGTGAACCACAACTACCAATTGGATTGCGTTTACCTCAATCGACAACAATACAAAAAGCCCATTCGACACCAGCCACTGTACTCACCACAACGTTACCTACGGCCGCACAATTGGCTGCACAAAAGATAACCGATCCAAATTTGCAAATAACACTTGTACCTCCAATTTCTCATGCGCATAATTCGCACGCTCATcatcacaacaacaaacgaaaatcatcggacaacaataaaaccacAATAAGTGGCCTGAAATTGTCGGAACAGAAAATTCCTTCACTTCCACCGTCGATAACCACAACACCAATTGgcaatttttcgaattcaacGAATGCATCATCAGGCGCCAGTTCGTCAGCATCACCACCATCAACACTTCTAAATGTTCCAAATCTTTCGTCGATTAatgacaatttaaaaataaatcaacttttattgcaaaacttcCTGAATCAATCAGCTGTTGCAAACGCCCAATCCGATCAATTGACGGCCGCGAAGCAAGATCCAAGCACAAATCCATTTCTTATGCTCGATCCAATGTATCTGACCGGTCTTTACAATAATCCCAATCTCTTTTTCCAACAATCACTTCCACAAGAGCTATTACAGCTGTACAAAAACTTTCCACAAGGATTGGGCATCATTCCGATCTCGaaaagttaa
- Protein Sequence
- MEVKVIGEPCGYHGPYTFYKGIRISPFSSSSSSPASSLSVTATVAATNNVYENHCFKENNCFDGIDRKTAELLRSNDTIIKSIKHEYDSESSSDCSDGLALPQRKFNKTDVKPRLLAECYKKPLVLALGDCIPVRPWSDSPIACIAELRMVWRDKNEQCLLTSLRLYFLPENTPIGRNCHGEDEVLAISERVVIRADDLLNWCDDTINWTYGLRANTLLDPSIKTEAKHDVNKCDNNLPTNVHNKNENDADFDSISTSNIRSLKNSKLNFTEVEKEKETYSRSNVAVISFPRYCRYRATLKRLEGVGDEWLRQTLVQALCGFVSYGPDTRVMFCKETFDYPELETHELLCNHLAPKLKGRPRGRRKKVRSDSPSSRIRCDSAGSDSCDSEISACSVEKVYSKYSPLYVKPEFKQGKQVLATRPKLRYNPRPARTKLKSESADGIRSSRRATNSDSSDSNDSDSNTNTTNQDDDENESSEESEFIQKLIGFHEAQDSQIPKVFWIGLRRVNLLSIYQKVRKMGGYEMVTERKMWKYLFGVDGGYNSISRKKYERALLPYEKYEMRKEYAERCAKYGKDVVDRNSGYNFEQHLIDGNRRLTEAEILEIQRQIKLQEARKEKDQNLHVDLSSGSLPVTVIVGNKKSTSPSQFQIQQPHTTITVHQTTIHPQSSMVRTSPPNNPIQITNQIQIQQFTVQPGSSKKDDGLSGKRKFSIDEYSARDANFVANHLAKLGKTTSLRQVRLRPDRQRDRKSGVTSPPSIGSITVSAIKPNEKENIPYLSGSKTTTITPILGNSNKSLRYPNSMSDVIDLDSDNEDSQSPPQSHLYSGGAMFPNMKKRKLDILRQGGLEVTAISNSGGPVNNQSVHGSTSTSSAQPVNVSKVKTTSKINASLTGAHIDVPLPKFQSQCMYKRTTRIFGNPKDLIPLPTQTTEYNCIDLTVEKCEPQLPIGLRLPQSTTIQKAHSTPATVLTTTLPTAAQLAAQKITDPNLQITLVPPISHAHNSHAHHHNNKRKSSDNNKTTISGLKLSEQKIPSLPPSITTTPIGNFSNSTNASSGASSSASPPSTLLNVPNLSSINDNLKINQLLLQNFLNQSAVANAQSDQLTAAKQDPSTNPFLMLDPMYLTGLYNNPNLFFQQSLPQELLQLYKNFPQGLGIIPISKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01350471; iTF_00133014; iTF_01287899;
- 90% Identity
- -
- 80% Identity
- -