Basic Information

Insect: Quadriops clusia
Gene Symbol: Hr39
Assembly: GCA_033557875.1
Location: JAWQRP010014855.1:3006-4994[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.37 6.3e+03 -2.9 4.2 100 176 157 213 93 250 0.41

2 3 7.7e-10 1.3e-05 25.7 0.0 1 40 351 389 351 402 0.80

3 3 3.9e-73 6.6e-69 234.2 0.0 164 408 412 662 397 662 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.37	6.3e+03	-2.9	4.2	100	176	157	213	93	250	0.41
2	3	7.7e-10	1.3e-05	25.7	0.0	1	40	351	389	351	402	0.80
3	3	3.9e-73	6.6e-69	234.2	0.0	164	408	412	662	397	662	0.87

Sequence Information

Coding Sequence: ATGGCAGCCGAAATGCGGTCCCCGAACGTGTCGGTGACCGCGCTGAACGGGTCCGACCCCGTGGACAGCGGGTCGGACGCCGAGGTGGCGCAGATCGAGTTCCAGAGCAGCGTGCACATGCGCGCGAAGAAGAGGGTGGGCGCGGGCGGTAGCGTGTCGGTGGGTCCGGGCGAGGAGGTGCCGCGACCGATGTCGTGGGAAGGCGAGCTGAGCGACGGGGGCGAGGGCGAGGGAGAGGGCAGGAATGAAATGTGCGTCGACGAGGACAGCAGCTGCGCGACGACGCTGGGGCTGGGGCCGGAGAACCTGAGCGTGGCGGCCCCGGCGACGCCGAAGGACAGCCCCGTGATGCGGCTGAAGCAGCAGGCCGGCGTCGGCAGCTACTCGCTGCACTCGACGCCGAGCAACTCGCCGCTGATGGCGCAGCGCGCCATCGGACACAAGGCGCTGAACGTGCCGCCGACGCCGAGCCCCGACTCGGCCATCCACTCGGCGTACAGCGTGTTCAGCAGCCCGTCGCAGTCGCCGCTGACGTCGCGTCACGTGACGCTGACGCCGTCGCTGTCGCGCAACAACAGCGACGCGTCGCACTCGTCCTGCTGCTCGTACTCGTCGGTGTCGGTGTCGGTGTCGCCGACGCAGCAGTTCTCGCCGACGCACTCGCCGGTGCAGGTGCGGCACCACGGCGTCGTCTTCCGGCCGGAGCACAGTGCCATATACCCCCAGGAGGACGAGGCCGACGACAAGCTGGCCGCGCTGGCCGGCGGCCCCGGCCTGGGGCTGGGCGGCGCCGCGATGGGCGCCGGCCCCGGCATCTCGCGCCAGCAGCTCATCAACTCACCGTGCCCGATCTGCGGCGATAAGATCTCCGGCTTCCACTACGGCATCTTCAGCTGCGAGTCGTGCAAGGGCTTCTTCAAGCGCACGGTGCAGAACCGCAAGAACTACGTGTGCCTGCGCGGCGCCGCCTGCCCCGTGACCGTCGCGACGCGCAAGAAGTGTCCGGCGTGCCGGTTCGACAAGTGCCTGCAGTGCGGCATGAAGCTGGAGGCGATCCGCGAGGACCGCACCCGCGGCGGCCGCAGCACCTACCAGTGTTCGTACACGCTGCCGGCGTCGCTGGTGGCGGCCCACTCCTCGGCCGCCGCGGTGGCCAACGCCGGCGTCTCGGGGCCGGTCAAGCTCGAGTCGGTCGTCGCGCCGGACGGCTGCGGCGACCCGGCCGCGAAACGACGGCACGCCTCGACCGTCCCGCCCCTGCTGCAGGAGATCATGGACGTCGAGCACCTGTGGCACTGCGGGGCGGGCGAGTCCAACCCGACCCCGACGCAGCGGGCCAACATCGGCAGCCACCCTCTCCTCGCCGGCACCGGGCTGGCCGCCGCCGACTCCCCGCCCGACTTCGTCGCCGAGCTCTGCAGCATCGCCGACCACCGCCTCTACAAGATCGTCAAGTGGTGCAAGTCGCTGCCGCTCTTCAAGAACATCTCCATCGACGACCAGATCTGCCTGCTCATCAACTCCTGGTGCGAGCTGCTGCTCTTCTCCTGCTGCTTCCGCTCGATGGCCTCGCCCGGCGAGATCCGCGTCTCGCTGGGCAAGAGCATCACGCTGGCGCAGGCGCGCGACATGGGCCTGCAGGCCTGCATCGAGCGCATGCTCAACTTCACCGAGCACCTGCGCCGGCTGCGCGTCGACCGCTACGAGTACGTCGCCATGAAGGTCATCGTGCTGCTCACTTCGGACACCTCGGAGCTGCGCGAGGCCGAGAAGGTGCGCGCCTCGCAGGAGAAGGCGCTCCAGGCGCTGCAGGGGTACACGCTCGCCAACTACCCGGACATGCCGGCCAAGTTCGGGGAGCTGCTGCTGCGGATCCCCGAGCTGCAGCGCACCTGCCAGGTCGGCAAGGAGATGCTCACGGTCAGCTCCAAGGCCTCGGACGTGCCCAGCTTCAACCTGCTGATGGAGCTGTTGCGCGGCGACCACTGA
Protein Sequence: MAAEMRSPNVSVTALNGSDPVDSGSDAEVAQIEFQSSVHMRAKKRVGAGGSVSVGPGEEVPRPMSWEGELSDGGEGEGEGRNEMCVDEDSSCATTLGLGPENLSVAAPATPKDSPVMRLKQQAGVGSYSLHSTPSNSPLMAQRAIGHKALNVPPTPSPDSAIHSAYSVFSSPSQSPLTSRHVTLTPSLSRNNSDASHSSCCSYSSVSVSVSPTQQFSPTHSPVQVRHHGVVFRPEHSAIYPQEDEADDKLAALAGGPGLGLGGAAMGAGPGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAACPVTVATRKKCPACRFDKCLQCGMKLEAIREDRTRGGRSTYQCSYTLPASLVAAHSSAAAVANAGVSGPVKLESVVAPDGCGDPAAKRRHASTVPPLLQEIMDVEHLWHCGAGESNPTPTQRANIGSHPLLAGTGLAAADSPPDFVAELCSIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMASPGEIRVSLGKSITLAQARDMGLQACIERMLNFTEHLRRLRVDRYEYVAMKVIVLLTSDTSELREAEKVRASQEKALQALQGYTLANYPDMPAKFGELLLRIPELQRTCQVGKEMLTVSSKASDVPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01287291;
90% Identity: iTF_01287291;
80% Identity: iTF_01287291;