Qclu011035.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- lrrfip2
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010003439.1:5782-11113[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 3.4e+04 -15.9 20.3 239 264 108 133 78 170 0.48 2 3 4.2e-110 1.4e-105 353.8 31.6 1 300 254 543 254 543 0.93 3 3 0.099 3.3e+03 -2.1 6.1 121 171 542 592 541 616 0.65
Sequence Information
- Coding Sequence
- atgagTGAATTCGATACGCCCCGCGAGGCCGCCCCAATCATGAGAAACAGTGAGAGCCTTGACTCTCTCACGGATATTTTGAATAGTTTGGATTCTGAGATTGTCTATAGTAGTGAAAGCTTCAAAAGTTATAGCTCTGATGACGAAGAGTATGATCTTGCTAATAACAAGATTGATGTACCAAATGAAGATGATGAAAAACCTGGAGAAATTGTGAAAGAGACAGAAGATGATGATGCTAGAGATAAAAAAGgtaaagatgaagaaaataagaagtatgaagaaaataagatggatgaagaaaataagaaggatgaagaaaataagaaggatgaagaaaataagaaggATGAAGAAAGTAAGAAGaatgaagaaaatgataaggatgaacataacaataataatgaagaaaacgaTAAGGATGTAGAAAACGATAAGGACGTAGAAAACAATGAAGATGAAAGAAACAACACAGAAAAACAACATgacgaaaataaagaaacaaacaaagtaGATCCAAAAGAAGCCCATATAAACGAGCTAAATAACAATGATATTCCTAATAGTTGTGATACTAAAGAAACAATGATAATCAAAGGCGTAACCAAAGAAGAAAGTGATGATTACAGtgatgaaaataatgattccggtaatgaaaataatgattcCGATGATAACTCCTCCAAGAACCAAAATCGGCCAAGTGTAATGCACGAAGACGAcgtcattaatttatttttggatcAATCCAACCAagatGCCGAAGCAAGATTGCTAGCAAGACGACAAGCGAGAGCGGAAGCCCGGGAAATCCGTATGAGAGAATTGGAGCGACAGCAGaaagaacaagaagaaaatgCGGATAGACAGTTTGACATGTTGTCGGAGCCGGTTGCAAGAACAGCTCGAACCACCGGGAATCGATATTTATCGAGCAGGCGGAGTTCTGAAGATTCCCTCGAAGATGGCGGGAGCCTTAGGGATTTACGACACGAGGTCAAAGAGGTAGAGGAGAAGTTCCGGAAAGCCATGATAGCAAACGCTCAATTAGACAACGACAAATCCGCACAAACATATCAAGTGGAGCTCCTGAAGGACAGGCTAGAAGAATTGGAAGAAGAACACTCGCAAGTAAAACGGGAACACCGAGATAAATGCCGAGCGTTCGACCAGCTCAAGAGGCTAAGCGAGAGGCTCAAGGACGATTTGGCTGTGACTCGTGCTGAACTGGAGGAACGCGACAGGCTAATTGCGGAGAAAGGACTCGTCATCGTCGGAGAAACCGTTCCTGAAGACGAGGCCGAGGGCGGCTCCAATTGCCTCGGCTTGCCTAAGAAGGCGCTGGTTAGCGTCGAGAATGCTCAACTGCTGGAAAGTGCCGGGGAAGGAAGCTTAGATGTACGATTGGCAAGGTTTGCGAAAGAGAAAGGCGAGCTCCAAGATCAAATAAGCCATCTTAAGCTAGAGTTAGAAGACGAGAGGAGCAAGAGGCGGAAATCCAACTCGAGTGGGGTTACACTAAATGGGCCTAGTTCGGATTTGGATCACGATGATATTCAAAAAGAAGTAAGCAAACAACTAGCCGAATATAAATTCCGCGCCCAGAAGGCAGAGCAAGACGTGGCAACGTTGCAAGCGACGGTTGCTCGTCTCGAGAGCCAAGTTATTCGATACAAATCAGCGGCAGAAGTTTCGGAAAAATCGGAAGAAGctctaaaaattgaaaaacgaaAACTGCAAAGAGAGGCGAGGGAGGCCCAAAGTCGAGCAGAAGAACTGGAGACCGCCAATAAGCACCTAGTGAAGCGTTTagacaaattgaaaaatgctAAATCGGCCCTTTTAAAGGAGCTCTGA
- Protein Sequence
- MSEFDTPREAAPIMRNSESLDSLTDILNSLDSEIVYSSESFKSYSSDDEEYDLANNKIDVPNEDDEKPGEIVKETEDDDARDKKGKDEENKKYEENKMDEENKKDEENKKDEENKKDEESKKNEENDKDEHNNNNEENDKDVENDKDVENNEDERNNTEKQHDENKETNKVDPKEAHINELNNNDIPNSCDTKETMIIKGVTKEESDDYSDENNDSGNENNDSDDNSSKNQNRPSVMHEDDVINLFLDQSNQDAEARLLARRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPVARTARTTGNRYLSSRRSSEDSLEDGGSLRDLRHEVKEVEEKFRKAMIANAQLDNDKSAQTYQVELLKDRLEELEEEHSQVKREHRDKCRAFDQLKRLSERLKDDLAVTRAELEERDRLIAEKGLVIVGETVPEDEAEGGSNCLGLPKKALVSVENAQLLESAGEGSLDVRLARFAKEKGELQDQISHLKLELEDERSKRRKSNSSGVTLNGPSSDLDHDDIQKEVSKQLAEYKFRAQKAEQDVATLQATVARLESQVIRYKSAAEVSEKSEEALKIEKRKLQREAREAQSRAEELETANKHLVKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -