Qclu021442.1
Basic Information
- Insect
- Quadriops clusia
- Gene Symbol
- sip1
- Assembly
- GCA_033557875.1
- Location
- JAWQRP010009539.1:741-3538[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.4e-44 6e-40 138.5 6.9 2 169 402 538 401 549 0.96
Sequence Information
- Coding Sequence
- atgaGTGACGAAGATATAGAAAAATTCGAAATCACCGACTATGACCTGGAGAACGAATTTAACATGTTCCGTCCTCGGCGGAATCTTACCAAAAATCAACAGATTTACGGCGTTTGGGCCGACGACAGTGACAACGATGACCGTCAAACTTCATCGCGATCGTCCCGAAAACCGAAGAGCTACACTGCTCCCATCGGCTTTGTTGCTGGAGGGATACAGCAATCTGGCAAGAACaaagagaagaagaaggaagaaGAGTATGAATCAGAAAACTCTGAAAGTGAAAACACGGAAGCCTACAAAAAAGAGTTCCTTCGGAATAGCTCCAGTGACTCTGACAGTGATGGTCCTCCAAGGATGGGGTTCGGAGCACAAAAGAACTCAACGGTGACCGAAATCAACGCCGATATCGCAGGTCTGAGACGAAAGAAGGATAATTTAAACCCAGCATTAATGAATAAAGGTGTTGGACAGTGGGAAAAGCATACTAAAGGAATTGGAGCAAAGTTGCTGCTGCAGATGGGCTATCAGCCTGGGAAAGGTTTAGGGAAAGAGTTACAAGGTATCAGTGCCCCGGTTGAAGCTCACGTTAGAAAAGGTAGGGGTGCTATTGGAGCATATGGACCAGAGAAAGCTGCTAAAGTCGCTGAGTTAAAAATAACAGAGAAAGATGATAAAGACAAAGATggttcaaaattaaaactagagAATGAAAAGGTTAAATGGAAAAAGAAGGACAGTAAAAGTACTAGATATTACTATCGCAGTGTAGATGATGTCATAGAACGTGGAAAACGCCCAGGAGGATTAAGAACACCTACAGCTGTTAGTGAATTAAGCAAAGTTAAGGTGATCGACATGACCGGTCCTCAGCAGCGAGTCCTCAGTGGTTATCACGCCCTGAGCGGTCCTAAAGTTCCCCCAGGAGTCGAGCTCTTTGAAGACGTCGTCCATAAACAATGTGCTAATTTCACTCTACCAGAAATTCAAcataatttagatttattgGTAGCTATGTGTGAACAAGACATCATTTTATGTGACAGGAATAAACGACATTGTCAGGATAGAATAGTAGGTTTAAAACAGGAAGAAACAACTTTAAAAGGAGTGTTAAAAAAAGAGGAAGAGTGCATCGATACATTAGAGAATGTATTGAATACAGTTACTAAATTAATGGATCAATCACAGGGGTATTCAATAGCAGAAGTCGCCCGTGCTTTTAAAGATctgcaaaataaacattatgaaGAGTATTGTTTATACGAACTAGGAGAATTAGCTCCAGGGCTAGTGGGACCTTTAATTACTTCAGCCTTAGTTAGTTGGTCACCTTTAACTGCTCCGAAACAATTCACAGAGCCTTATGATAACTTGGTCTGGAATACTTGGGTACCTGTTATACGCAGTTGTGTCAgtgTTTGGAATGCAAGGGACTGTGAACCATTAATTGACATGTTAGAAATTTGGATGCCACTTTTACCAAACTGGATTCTTGATAATGTCATTGATCAGTTGATTGTGCCGAAAATTTCttcagaaattaatatttggaatCCATTAACTGATACAACTCCTATACATATTTGGATTCATCCTTGGATACCACTTTTAGTGCTCATTAGGGTGACGGGGAATTCCATTAGGGTATGTTCTAATCTCTTCTCCGAATACCATTAG
- Protein Sequence
- MSDEDIEKFEITDYDLENEFNMFRPRRNLTKNQQIYGVWADDSDNDDRQTSSRSSRKPKSYTAPIGFVAGGIQQSGKNKEKKKEEEYESENSESENTEAYKKEFLRNSSSDSDSDGPPRMGFGAQKNSTVTEINADIAGLRRKKDNLNPALMNKGVGQWEKHTKGIGAKLLLQMGYQPGKGLGKELQGISAPVEAHVRKGRGAIGAYGPEKAAKVAELKITEKDDKDKDGSKLKLENEKVKWKKKDSKSTRYYYRSVDDVIERGKRPGGLRTPTAVSELSKVKVIDMTGPQQRVLSGYHALSGPKVPPGVELFEDVVHKQCANFTLPEIQHNLDLLVAMCEQDIILCDRNKRHCQDRIVGLKQEETTLKGVLKKEEECIDTLENVLNTVTKLMDQSQGYSIAEVARAFKDLQNKHYEEYCLYELGELAPGLVGPLITSALVSWSPLTAPKQFTEPYDNLVWNTWVPVIRSCVSVWNARDCEPLIDMLEIWMPLLPNWILDNVIDQLIVPKISSEINIWNPLTDTTPIHIWIHPWIPLLVLIRVTGNSIRVCSNLFSEYH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -