Pnym139821.1
Basic Information
- Insect
- Pyrrhosoma nymphula
- Gene Symbol
- dsx
- Assembly
- GCA_963573305.1
- Location
- OY754338.1:31666878-31684542[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.059 2.3e+03 1.6 0.1 4 13 157 166 154 170 0.81 2 2 2.2e-15 8.6e-11 44.6 4.1 19 47 311 339 306 339 0.95
Sequence Information
- Coding Sequence
- ATGCTTTCTTTCTTCGTCTTTATGTCCGCATATACCACTTCTCTCCTTGACGACAAGCACCCCATCCACGCATTAATATCTACGATTCCGCGACGATATTCGAGTAGTCAAAATTCACTGGCCGACGAGCCGAGGTTAAAGTGGGGCCCTTGCCACTCACCTCTCACTGCTCTGCCGTCTCGTCCATTGCTGTCGCTTGCACTTCAACCTCCCCTACTTATCCCCTCCCCTCCCGGCACTCTCCTCCCGTCCAACCCTCCCAGCGCCACCTCACCCCCACgccctcctttccccctcctctaCCCCCTCAACGTCACAAACTCGGGCCGCAAAGCATACCCCCCACCCCACCATCTAGTGAGCGCCTCCTTCTCCTCCATCGCTGGCCAAGACGACGAAAGCCTTCATTCTTCCACCCCTTCCGTCTCTCAAGCCACACGCGGTCGGCCGCTGCTTCGCGCAAGGACTTGGTGCGGAAAGTGTAGAAATAAAGGAACAGGTGTTTTGTCTCCGTTGTTTTATTGGGGCCGGGCACGATTTTCTCCACGTGTTGGCGTGTTTGAGTGCTCGGCAGGGGGGCGCTGTGTGTGCATGCCTTTGCTGTCCCGATTCGCCACGATTTCTGAAACGAAATCAAACCCTGATTCGATGGTATCGGAGACGTCCGTTATGGCGGGGATCGGTCTAACGTCGCCCCAGGTCGAAACCCCGCACGCCACCAACGAGGCTTATGACAACAGTTACGATCCGTCCAGCTCGGCAGCAACAGGAGCCGGCGGGCCCTCGTCCGCCTCCAACGCGCCTGGAGATCAGGAATCCTGCCCCCGGACTCCTCAGGCCTCCTCATCGGGGGCTGGAGGCGTAGCCGATATGTCGGCGCACGGAGGGGGTGGTTCCGGCAGTGAAAAGTGCTCCCCATCGGCAGGACTAGGACACAAGAGATACTGCAAATTCAGGTACTGCAAGTGCGACAAGTGTCGACTCACGGCAGAGCGACAGAGGGTCATGGCAATGCAGACGGCCCTCAGGAGGGCCCAAGCGCAAGATGAGGCCAACAGGGGTTTGCTCCCGGTGGATGGCCCCGAAGGAGGTGTAGTGGAGGCTTCCTCCTCGACCCCCATGTGGGGCGAGGGCCCTTCGGGAGGCGAGGGCCCAAGCGGTGGACCCCAGCAGAGGCGGGACAGGATGCCGAGCCCTGTCTTGGTTAGGAGCGCCTACTCTCCCATAGGGCACGGAGCGTCGAGGGCTGAGAGCAGCGGTTCGTCGGCGACGCCTTCGCCGCCGGCCTCTTCGGGCCTCGGGCCAGCCCAGTGCCCGGGGGGCAGCGGCCTGCCCGTGGGCCCCATGATGATGATGCCGGTCGGTCGGCTGCCACCCCCTCCCGGTCCCTCATCGTTGGCGGCGACTTCCATGGGACATTCCGGCGTCTCGCCGACCGTCGCGCCCGGGATGTGCGCCGCCCAGCACTCTATGAACCCGTCGACATCTGCAAACGCAGTAGGTATGCGTAAACCAACAATAAACCTCCGAAAGGGGGAGAGGGTTGAGCGTGCGAGACTAGGATGGCGCAGAAGCGTACTGCGCAAGTCACGTGTTGAGAAAAGAACTTCACCGAGCAAGTGGTTGCCATGGCAACAGACGATGCTTCACCGCCTCGCGCGCTCCTTCCCTCTCCCGGCGCAACCCTAG
- Protein Sequence
- MLSFFVFMSAYTTSLLDDKHPIHALISTIPRRYSSSQNSLADEPRLKWGPCHSPLTALPSRPLLSLALQPPLLIPSPPGTLLPSNPPSATSPPRPPFPLLYPLNVTNSGRKAYPPPHHLVSASFSSIAGQDDESLHSSTPSVSQATRGRPLLRARTWCGKCRNKGTGVLSPLFYWGRARFSPRVGVFECSAGGRCVCMPLLSRFATISETKSNPDSMVSETSVMAGIGLTSPQVETPHATNEAYDNSYDPSSSAATGAGGPSSASNAPGDQESCPRTPQASSSGAGGVADMSAHGGGGSGSEKCSPSAGLGHKRYCKFRYCKCDKCRLTAERQRVMAMQTALRRAQAQDEANRGLLPVDGPEGGVVEASSSTPMWGEGPSGGEGPSGGPQQRRDRMPSPVLVRSAYSPIGHGASRAESSGSSATPSPPASSGLGPAQCPGGSGLPVGPMMMMPVGRLPPPPGPSSLAATSMGHSGVSPTVAPGMCAAQHSMNPSTSANAVGMRKPTINLRKGERVERARLGWRRSVLRKSRVEKRTSPSKWLPWQQTMLHRLARSFPLPAQP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -