Pnym155219.1
Basic Information
- Insect
- Pyrrhosoma nymphula
- Gene Symbol
- Su(H)
- Assembly
- GCA_963573305.1
- Location
- OY754340.1:38448613-38492153[-]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 1.7e+04 -1.1 0.1 63 99 146 185 145 205 0.60 2 2 1.2e-67 2e-62 211.9 0.0 1 123 270 392 270 392 0.99
Sequence Information
- Coding Sequence
- ATGCACATGATACCTGACCCCCTGGGCTCGACCCACGATGCCGTGAACGGGGAGCACCAGGAATCGCCTCAGCGGCACCAGTACAACAATGCCGTCATGGCACGGGGTAATCACGGCAACCACTCGAGGGGCATCAGCTTGGTGAGCAGTGGGTACCTGATGGGGGGATCTGCCGGTCCACATTGTGGTGCAGTGCAGATGCCGCCATCTCCTGTGAGAACGCCTTCGCCCGTGCCGATCGAACAGTTCGGTTCGCTCCTCCGGCCAGGGAAGGATCAGAGGCTGACTCGTGACGCAATGAAGAAATACCTTCGGGAGAGGAGTGACATGGTGGTCATAATCCTGCACGCAAAGGTCGCGCAGAAGTCTTACGGCACGGAGAAACGATTCTTTTGTCCTCCGCCCTGCATCTACCTGTACGGCGAGGGTTGGAGGCAGAAGCAAGAGGCTCTTCTCAAGTCTGGCGAGTCTGAACAGGGGTCGCAGCTGTGTGCCTTCATTGGGATCGGCAACTCTGACCAAGACATGCAGCAGTTGGATCTAAACGGGAAGCAATACTGTGCAGCCAAGACGCTGTATATATCAGACTCGGACAAGAGGAAACACTTCATGCTCTCCGTGAAGATGTTCTACGGCAATGGGCACGACATAGGGGTGTTCTACAGCAAGCGGATCAAAGTGATTTCAAAGCCTTCGAAGAAGAAGCAGTCTCTCAAGAATGCAGATCTGTGCATTGCGAGCGGTACCAAAGTTGCTCTCTTCAACCGGCTCCGGTCACAAACCGTCAGCACGCGGTACCTGCATGTAGAGAATGGCAACTTCCACGCAAGCTCTACGCAGTGGGGAGCCTTCACCATACATCTACTCGATGACAATGAGTCCGAGTCTGAGGAGTTTGCAGTTCGGGATGGCTACATCCACTACGGCAGCACCATCAAGCTGGTGTGCAGCGTCACGGGCATGGCGCTGCCCAGGTTGGTGATCAGGAAGGTGGACAAGCAGATGGCACTCCTGGATGCAGACGACCCCGTGTCACAGCTGCACAAGTGCGCCTTCTACCTCAAAGACATGGAGCGAATGTACCTCTGCCTCTCGCAGGAGAGGATCATCCAGTTCCAGGCTACTCCATGTCCCAAAGATCCGAATCGTGAGATGATAAATGACGGAGCATCGTGGACGATCATCAGCACAGACAAGGCGGAGTACCAGTTCTTTGAGGGGATGGGACCCATTCGAACCACCATCACTCCTGTCCCAATTGTGCACAGTTTACACTTAAATGGTGGTGGAGACATAGCAATGCTGGAGCTGACAGGTGAAAACTTCAGTCCAAATCTCAAGGTGTGGTTTGACGACGTGGAGGCCGAGACGATGTACCGCTGCCAGGAGAGTATGCTGTGTGTTGTGCCGGAGATCTCTGCTTTTTGTGGAAACTGGCTCTGGGTGCCGCAGGCCACTCAGGTAATCACAGGCTCATTTTCGCACTGGCTTTCTCAGTGTTCCAAGTGGAGAACGTTTGGATCAGTTGAAGACtgctaa
- Protein Sequence
- MHMIPDPLGSTHDAVNGEHQESPQRHQYNNAVMARGNHGNHSRGISLVSSGYLMGGSAGPHCGAVQMPPSPVRTPSPVPIEQFGSLLRPGKDQRLTRDAMKKYLRERSDMVVIILHAKVAQKSYGTEKRFFCPPPCIYLYGEGWRQKQEALLKSGESEQGSQLCAFIGIGNSDQDMQQLDLNGKQYCAAKTLYISDSDKRKHFMLSVKMFYGNGHDIGVFYSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVENGNFHASSTQWGAFTIHLLDDNESESEEFAVRDGYIHYGSTIKLVCSVTGMALPRLVIRKVDKQMALLDADDPVSQLHKCAFYLKDMERMYLCLSQERIIQFQATPCPKDPNREMINDGASWTIISTDKAEYQFFEGMGPIRTTITPVPIVHSLHLNGGGDIAMLELTGENFSPNLKVWFDDVEAETMYRCQESMLCVVPEISAFCGNWLWVPQATQVITGSFSHWLSQCSKWRTFGSVEDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00797058; iTF_01401947; iTF_00343976; iTF_00242919; iTF_00241932; iTF_00894527;
- 90% Identity
- iTF_00797058;
- 80% Identity
- -